Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 AC122357.3-201ENSMUST00000221260 2293 ntBASIC5.2□□□□□ -1.58
Clrn1Q8K445 Gm10997-201ENSMUST00000210294 1500 ntBASIC5.2□□□□□ -1.58
Clrn1Q8K445 Gm10378-201ENSMUST00000100696 429 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Clrn1Q8K445 Gm24265-201ENSMUST00000101833 141 ntBASIC5.2□□□□□ -1.58
Clrn1Q8K445 Gm23431-201ENSMUST00000104006 107 ntBASIC5.2□□□□□ -1.58
Clrn1Q8K445 Ppih-202ENSMUST00000106317 613 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Clrn1Q8K445 Gm9733-201ENSMUST00000108361 618 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Clrn1Q8K445 Gm14744-201ENSMUST00000114039 800 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Clrn1Q8K445 Hmgn2l6-201ENSMUST00000115986 267 ntBASIC5.2□□□□□ -1.58
Clrn1Q8K445 Olfr587-ps1-201ENSMUST00000118378 948 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
Clrn1Q8K445 Gm6893-201ENSMUST00000118385 522 ntBASIC5.2□□□□□ -1.58
Clrn1Q8K445 Gm11826-201ENSMUST00000118781 438 ntBASIC5.2□□□□□ -1.58
Clrn1Q8K445 Gm12303-201ENSMUST00000119506 673 ntBASIC5.2□□□□□ -1.58
Clrn1Q8K445 Gm14472-201ENSMUST00000119815 282 ntBASIC5.2□□□□□ -1.58
Clrn1Q8K445 Gm16100-201ENSMUST00000120489 231 ntBASIC5.2□□□□□ -1.58
Clrn1Q8K445 Olfr1186-201ENSMUST00000121619 1090 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
Clrn1Q8K445 Gm14766-201ENSMUST00000121689 367 ntBASIC5.2□□□□□ -1.58
Clrn1Q8K445 Gm13363-201ENSMUST00000122008 522 ntBASIC5.2□□□□□ -1.58
Clrn1Q8K445 Gm24628-201ENSMUST00000122761 289 ntBASIC5.2□□□□□ -1.58
Clrn1Q8K445 1700073E17Rik-202ENSMUST00000146858 382 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Clrn1Q8K445 Tmem216-206ENSMUST00000154383 927 ntAPPRIS P1 TSL 3 BASIC5.2□□□□□ -1.58
Clrn1Q8K445 Trbv10-201ENSMUST00000168322 289 ntBASIC5.2□□□□□ -1.58
Clrn1Q8K445 Gm22122-201ENSMUST00000175147 200 ntBASIC5.2□□□□□ -1.58
Clrn1Q8K445 Gm23872-201ENSMUST00000175432 77 ntBASIC5.2□□□□□ -1.58
Clrn1Q8K445 Gm24315-201ENSMUST00000177835 127 ntBASIC5.2□□□□□ -1.58
Clrn1Q8K445 Gm24407-201ENSMUST00000177864 141 ntBASIC5.2□□□□□ -1.58
Clrn1Q8K445 Rps12-ps21-201ENSMUST00000178172 402 ntBASIC5.2□□□□□ -1.58
Clrn1Q8K445 Mir6341-201ENSMUST00000183490 121 ntBASIC5.2□□□□□ -1.58
Clrn1Q8K445 Mir3473f-201ENSMUST00000183743 136 ntBASIC5.2□□□□□ -1.58
Clrn1Q8K445 Gm27887-201ENSMUST00000184367 102 ntBASIC5.2□□□□□ -1.58
Clrn1Q8K445 Gm28885-201ENSMUST00000185615 563 ntBASIC5.2□□□□□ -1.58
Clrn1Q8K445 Gm28474-201ENSMUST00000188501 315 ntBASIC5.2□□□□□ -1.58
Clrn1Q8K445 Gm43516-201ENSMUST00000196891 322 ntBASIC5.2□□□□□ -1.58
Clrn1Q8K445 4930519L02Rik-202ENSMUST00000200254 452 ntTSL 3 BASIC5.2□□□□□ -1.58
Clrn1Q8K445 Gm42896-201ENSMUST00000201249 1113 ntBASIC5.2□□□□□ -1.58
Clrn1Q8K445 Gm43456-201ENSMUST00000202519 457 ntBASIC5.2□□□□□ -1.58
Clrn1Q8K445 Gm5110-201ENSMUST00000203122 1063 ntBASIC5.2□□□□□ -1.58
Clrn1Q8K445 Gm33626-201ENSMUST00000206790 828 ntBASIC5.2□□□□□ -1.58
Clrn1Q8K445 AC161520.1-201ENSMUST00000210954 939 ntBASIC5.2□□□□□ -1.58
Clrn1Q8K445 Olfr908-201ENSMUST00000215139 932 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
Clrn1Q8K445 AC124408.2-201ENSMUST00000228168 645 ntBASIC5.2□□□□□ -1.58
Clrn1Q8K445 AC154738.7-201ENSMUST00000228606 579 ntBASIC5.2□□□□□ -1.58
Clrn1Q8K445 Olfr121-201ENSMUST00000074555 1253 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Clrn1Q8K445 Olfr168-201ENSMUST00000078554 939 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
Clrn1Q8K445 Olfr777-201ENSMUST00000080313 936 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
Clrn1Q8K445 Gm7995-201ENSMUST00000089789 429 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Clrn1Q8K445 Il12rb2-202ENSMUST00000117441 2600 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Clrn1Q8K445 Olfr329-ps-203ENSMUST00000219448 4052 ntAPPRIS P2 TSL 5 BASIC5.2□□□□□ -1.58
Clrn1Q8K445 Prg4-206ENSMUST00000161611 3821 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Clrn1Q8K445 Gm7646-201ENSMUST00000198590 1346 ntBASIC5.2□□□□□ -1.58
Clrn1Q8K445 Clec4e-201ENSMUST00000032239 2518 ntAPPRIS P2 TSL 1 (best) BASIC5.2□□□□□ -1.58
Clrn1Q8K445 Nptn-205ENSMUST00000176250 4531 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Clrn1Q8K445 Ryr3-211ENSMUST00000208290 15468 ntAPPRIS P3 TSL 5 BASIC5.2□□□□□ -1.58
Clrn1Q8K445 Eya4-201ENSMUST00000074366 3488 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Clrn1Q8K445 Fbxw15-201ENSMUST00000056745 1495 ntAPPRIS P2 TSL 1 (best) BASIC5.2□□□□□ -1.58
Clrn1Q8K445 Cxcl11-202ENSMUST00000122808 3794 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Clrn1Q8K445 Gm6818-201ENSMUST00000190556 2558 ntBASIC5.19□□□□□ -1.58
Clrn1Q8K445 Gm2832-201ENSMUST00000172412 1760 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Clrn1Q8K445 Gm34240-201ENSMUST00000192500 1936 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Clrn1Q8K445 Olfr25-202ENSMUST00000212354 1362 ntAPPRIS ALT2 BASIC5.19□□□□□ -1.58
Clrn1Q8K445 Ktn1-203ENSMUST00000185940 3869 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
Clrn1Q8K445 Ktn1-208ENSMUST00000187039 3875 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
Clrn1Q8K445 Lrrc4c-202ENSMUST00000135431 3646 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Clrn1Q8K445 Lcp2-201ENSMUST00000052413 3644 ntAPPRIS P2 TSL 1 (best) BASIC5.19□□□□□ -1.58
Clrn1Q8K445 Ifi202b-201ENSMUST00000000266 1697 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Clrn1Q8K445 Cbx5-202ENSMUST00000118152 8803 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Clrn1Q8K445 Gm26146-201ENSMUST00000104478 185 ntBASIC5.19□□□□□ -1.58
Clrn1Q8K445 Rnf148-201ENSMUST00000104979 1239 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
Clrn1Q8K445 Clec1b-202ENSMUST00000112079 455 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Clrn1Q8K445 Gm15402-201ENSMUST00000114051 670 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Clrn1Q8K445 Gm14163-201ENSMUST00000117342 217 ntBASIC5.19□□□□□ -1.58
Clrn1Q8K445 Gm12268-201ENSMUST00000118398 442 ntBASIC5.19□□□□□ -1.58
Clrn1Q8K445 Gm12016-201ENSMUST00000119079 681 ntBASIC5.19□□□□□ -1.58
Clrn1Q8K445 Gm13245-201ENSMUST00000119646 260 ntBASIC5.19□□□□□ -1.58
Clrn1Q8K445 Gm11512-201ENSMUST00000119669 663 ntBASIC5.19□□□□□ -1.58
Clrn1Q8K445 Gm14925-201ENSMUST00000120611 438 ntBASIC5.19□□□□□ -1.58
Clrn1Q8K445 Mup-ps17-201ENSMUST00000120723 218 ntBASIC5.19□□□□□ -1.58
Clrn1Q8K445 Gm6031-201ENSMUST00000121314 1054 ntBASIC5.19□□□□□ -1.58
Clrn1Q8K445 Gm22160-201ENSMUST00000158405 328 ntBASIC5.19□□□□□ -1.58
Clrn1Q8K445 Gm6872-201ENSMUST00000165001 700 ntBASIC5.19□□□□□ -1.58
Clrn1Q8K445 Gm8224-201ENSMUST00000166178 497 ntBASIC5.19□□□□□ -1.58
Clrn1Q8K445 Plgrkt-201ENSMUST00000016639 1012 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Clrn1Q8K445 Vdac2-208ENSMUST00000172727 1291 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
Clrn1Q8K445 Vmn1r-ps84-201ENSMUST00000172853 923 ntBASIC5.19□□□□□ -1.58
Clrn1Q8K445 Znrd1as-203ENSMUST00000173814 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
Clrn1Q8K445 Gm21883-201ENSMUST00000179028 372 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Clrn1Q8K445 Gm21789-201ENSMUST00000179547 372 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Clrn1Q8K445 Gm21870-201ENSMUST00000179973 372 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Clrn1Q8K445 Mir7211-201ENSMUST00000184071 63 ntBASIC5.19□□□□□ -1.58
Clrn1Q8K445 Gm28835-202ENSMUST00000189206 543 ntTSL 3 BASIC5.19□□□□□ -1.58
Clrn1Q8K445 Gm28078-201ENSMUST00000190381 874 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Clrn1Q8K445 Gm37175-201ENSMUST00000192023 587 ntTSL 5 BASIC5.19□□□□□ -1.58
Clrn1Q8K445 Gm38131-201ENSMUST00000192449 430 ntBASIC5.19□□□□□ -1.58
Clrn1Q8K445 Gm18296-201ENSMUST00000192475 783 ntBASIC5.19□□□□□ -1.58
Clrn1Q8K445 Gm38015-201ENSMUST00000193048 188 ntBASIC5.19□□□□□ -1.58
Clrn1Q8K445 Gm37202-201ENSMUST00000193679 361 ntTSL 3 BASIC5.19□□□□□ -1.58
Clrn1Q8K445 Gm37375-201ENSMUST00000193859 387 ntBASIC5.19□□□□□ -1.58
Clrn1Q8K445 Gm37385-201ENSMUST00000195223 387 ntBASIC5.19□□□□□ -1.58
Clrn1Q8K445 Ighv1-44-201ENSMUST00000195597 352 ntBASIC5.19□□□□□ -1.58
Clrn1Q8K445 Gm43798-201ENSMUST00000202056 394 ntBASIC5.19□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 76.8 ms