Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Rps18-ps2-201ENSMUST00000119493 398 ntBASIC4.53□□□□□ -1.68
Ccdc28bQ8CEG5 Gm13932-201ENSMUST00000120873 610 ntBASIC4.53□□□□□ -1.68
Ccdc28bQ8CEG5 Gm11233-201ENSMUST00000122357 634 ntBASIC4.53□□□□□ -1.68
Ccdc28bQ8CEG5 Gm14368-201ENSMUST00000145305 415 ntBASIC4.53□□□□□ -1.68
Ccdc28bQ8CEG5 Gm3025-201ENSMUST00000163454 489 ntBASIC4.53□□□□□ -1.68
Ccdc28bQ8CEG5 Gm3077-201ENSMUST00000165903 627 ntBASIC4.53□□□□□ -1.68
Ccdc28bQ8CEG5 Gm2878-201ENSMUST00000170173 486 ntBASIC4.53□□□□□ -1.68
Ccdc28bQ8CEG5 Gm27985-201ENSMUST00000185112 378 ntBASIC4.53□□□□□ -1.68
Ccdc28bQ8CEG5 Gm29492-201ENSMUST00000187124 457 ntBASIC4.53□□□□□ -1.68
Ccdc28bQ8CEG5 Galntl6-205ENSMUST00000188531 1056 ntTSL 5 BASIC4.53□□□□□ -1.68
Ccdc28bQ8CEG5 4930535G08Rik-201ENSMUST00000192017 425 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Ccdc28bQ8CEG5 Gm37187-201ENSMUST00000193425 341 ntBASIC4.53□□□□□ -1.68
Ccdc28bQ8CEG5 Gm37002-201ENSMUST00000194560 373 ntBASIC4.53□□□□□ -1.68
Ccdc28bQ8CEG5 Gm43408-201ENSMUST00000198263 440 ntBASIC4.53□□□□□ -1.68
Ccdc28bQ8CEG5 Vmn1r-ps5-201ENSMUST00000202963 931 ntBASIC4.53□□□□□ -1.68
Ccdc28bQ8CEG5 Gm44048-201ENSMUST00000204531 361 ntBASIC4.53□□□□□ -1.68
Ccdc28bQ8CEG5 Olfr1309-201ENSMUST00000207885 964 ntBASIC4.53□□□□□ -1.68
Ccdc28bQ8CEG5 Gm38843-201ENSMUST00000209189 323 ntTSL 5 BASIC4.53□□□□□ -1.68
Ccdc28bQ8CEG5 Gm39384-201ENSMUST00000213703 743 ntTSL 5 BASIC4.53□□□□□ -1.68
Ccdc28bQ8CEG5 Gm10037-202ENSMUST00000221266 549 ntAPPRIS P5 TSL 2 BASIC4.53□□□□□ -1.68
Ccdc28bQ8CEG5 AC158523.1-201ENSMUST00000221398 328 ntBASIC4.53□□□□□ -1.68
Ccdc28bQ8CEG5 AC134864.1-201ENSMUST00000226326 511 ntBASIC4.53□□□□□ -1.68
Ccdc28bQ8CEG5 Pbsn-201ENSMUST00000000003 902 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Ccdc28bQ8CEG5 Olfr1451-201ENSMUST00000063144 933 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
Ccdc28bQ8CEG5 Gm23459-201ENSMUST00000083259 131 ntBASIC4.53□□□□□ -1.68
Ccdc28bQ8CEG5 9630002D21Rik-202ENSMUST00000222033 2345 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Ccdc28bQ8CEG5 Ecm2-201ENSMUST00000051504 3596 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Ccdc28bQ8CEG5 Sorbs2-203ENSMUST00000124544 3798 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Ccdc28bQ8CEG5 Rbm41-203ENSMUST00000113007 3691 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Ccdc28bQ8CEG5 AC102431.1-201ENSMUST00000223773 1449 ntBASIC4.53□□□□□ -1.68
Ccdc28bQ8CEG5 Olfr875-202ENSMUST00000215128 2039 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
Ccdc28bQ8CEG5 Olfr1101-202ENSMUST00000214411 3235 ntAPPRIS P1 TSL 3 BASIC4.53□□□□□ -1.68
Ccdc28bQ8CEG5 Ddx60-202ENSMUST00000093485 5989 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
Ccdc28bQ8CEG5 Ralgapa1-211ENSMUST00000220367 7473 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.69
Ccdc28bQ8CEG5 Jchain-201ENSMUST00000087033 1393 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.69
Ccdc28bQ8CEG5 Vav3-202ENSMUST00000106576 3123 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Ccdc28bQ8CEG5 Olfr203-202ENSMUST00000215893 1521 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
Ccdc28bQ8CEG5 Olfr726-205ENSMUST00000215278 1324 ntAPPRIS P1 TSL 3 BASIC4.52□□□□□ -1.69
Ccdc28bQ8CEG5 Gab3-203ENSMUST00000114109 2093 ntTSL 2 BASIC4.52□□□□□ -1.69
Ccdc28bQ8CEG5 Fap-202ENSMUST00000102732 2751 ntAPPRIS P2 TSL 1 (best) BASIC4.52□□□□□ -1.69
Ccdc28bQ8CEG5 Elf1-202ENSMUST00000110835 3888 ntAPPRIS P2 TSL 1 (best) BASIC4.52□□□□□ -1.69
Ccdc28bQ8CEG5 Igkv1-132-201ENSMUST00000103305 362 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
Ccdc28bQ8CEG5 Ighv9-4-201ENSMUST00000103482 294 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
Ccdc28bQ8CEG5 Gm12062-201ENSMUST00000117533 259 ntBASIC4.52□□□□□ -1.69
Ccdc28bQ8CEG5 Gm14878-201ENSMUST00000118167 293 ntBASIC4.52□□□□□ -1.69
Ccdc28bQ8CEG5 Gm14788-201ENSMUST00000119457 375 ntBASIC4.52□□□□□ -1.69
Ccdc28bQ8CEG5 Gm12768-201ENSMUST00000120055 759 ntBASIC4.52□□□□□ -1.69
Ccdc28bQ8CEG5 Gm14725-201ENSMUST00000120324 828 ntBASIC4.52□□□□□ -1.69
Ccdc28bQ8CEG5 Gm13533-201ENSMUST00000121104 177 ntBASIC4.52□□□□□ -1.69
Ccdc28bQ8CEG5 Gm5391-201ENSMUST00000121155 613 ntBASIC4.52□□□□□ -1.69
Ccdc28bQ8CEG5 Gm11350-201ENSMUST00000121436 870 ntBASIC4.52□□□□□ -1.69
Ccdc28bQ8CEG5 Gm11910-201ENSMUST00000121624 432 ntBASIC4.52□□□□□ -1.69
Ccdc28bQ8CEG5 C030037D09Rik-201ENSMUST00000125967 367 ntTSL 5 BASIC4.52□□□□□ -1.69
Ccdc28bQ8CEG5 Vmn1r-ps64-201ENSMUST00000173746 655 ntBASIC4.52□□□□□ -1.69
Ccdc28bQ8CEG5 Prl3c1-201ENSMUST00000018066 823 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
Ccdc28bQ8CEG5 Mir7046-201ENSMUST00000183435 66 ntBASIC4.52□□□□□ -1.69
Ccdc28bQ8CEG5 Gm28943-201ENSMUST00000186187 615 ntBASIC4.52□□□□□ -1.69
Ccdc28bQ8CEG5 Gm28736-201ENSMUST00000186257 615 ntBASIC4.52□□□□□ -1.69
Ccdc28bQ8CEG5 Gm29401-201ENSMUST00000186690 615 ntBASIC4.52□□□□□ -1.69
Ccdc28bQ8CEG5 Gm29178-204ENSMUST00000186784 615 ntBASIC4.52□□□□□ -1.69
Ccdc28bQ8CEG5 Gm28589-201ENSMUST00000186991 615 ntBASIC4.52□□□□□ -1.69
Ccdc28bQ8CEG5 Gm28936-201ENSMUST00000187153 615 ntBASIC4.52□□□□□ -1.69
Ccdc28bQ8CEG5 Gm29556-201ENSMUST00000187591 696 ntBASIC4.52□□□□□ -1.69
Ccdc28bQ8CEG5 Gm29121-201ENSMUST00000187611 615 ntBASIC4.52□□□□□ -1.69
Ccdc28bQ8CEG5 Gm28243-201ENSMUST00000187801 615 ntBASIC4.52□□□□□ -1.69
Ccdc28bQ8CEG5 Gm28844-202ENSMUST00000187977 615 ntBASIC4.52□□□□□ -1.69
Ccdc28bQ8CEG5 Gm3145-201ENSMUST00000188584 220 ntBASIC4.52□□□□□ -1.69
Ccdc28bQ8CEG5 1700121L16Rik-201ENSMUST00000189166 561 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Ccdc28bQ8CEG5 Gm29058-201ENSMUST00000189510 615 ntBASIC4.52□□□□□ -1.69
Ccdc28bQ8CEG5 Gm28190-201ENSMUST00000189766 722 ntBASIC4.52□□□□□ -1.69
Ccdc28bQ8CEG5 1700113H08Rik-203ENSMUST00000189775 798 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Ccdc28bQ8CEG5 Gm29624-201ENSMUST00000190018 615 ntBASIC4.52□□□□□ -1.69
Ccdc28bQ8CEG5 Gm28780-201ENSMUST00000190223 615 ntBASIC4.52□□□□□ -1.69
Ccdc28bQ8CEG5 Gm28969-211ENSMUST00000190992 615 ntBASIC4.52□□□□□ -1.69
Ccdc28bQ8CEG5 Gm28990-207ENSMUST00000191219 615 ntBASIC4.52□□□□□ -1.69
Ccdc28bQ8CEG5 Gm36468-201ENSMUST00000192119 615 ntBASIC4.52□□□□□ -1.69
Ccdc28bQ8CEG5 Gm31572-201ENSMUST00000193341 615 ntBASIC4.52□□□□□ -1.69
Ccdc28bQ8CEG5 Gm30175-201ENSMUST00000194173 615 ntBASIC4.52□□□□□ -1.69
Ccdc28bQ8CEG5 Gm30858-201ENSMUST00000195516 615 ntBASIC4.52□□□□□ -1.69
Ccdc28bQ8CEG5 Gm44816-201ENSMUST00000206666 477 ntBASIC4.52□□□□□ -1.69
Ccdc28bQ8CEG5 Olfr1492-ps1-201ENSMUST00000207071 865 ntBASIC4.52□□□□□ -1.69
Ccdc28bQ8CEG5 AC159819.1-201ENSMUST00000213911 328 ntBASIC4.52□□□□□ -1.69
Ccdc28bQ8CEG5 Gm35552-201ENSMUST00000214355 396 ntTSL 5 BASIC4.52□□□□□ -1.69
Ccdc28bQ8CEG5 AC151968.1-201ENSMUST00000214437 568 ntTSL 5 BASIC4.52□□□□□ -1.69
Ccdc28bQ8CEG5 H60c-203ENSMUST00000216211 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
Ccdc28bQ8CEG5 AC159256.1-201ENSMUST00000224298 1039 ntBASIC4.52□□□□□ -1.69
Ccdc28bQ8CEG5 CT009711.3-201ENSMUST00000225882 250 ntBASIC4.52□□□□□ -1.69
Ccdc28bQ8CEG5 AC116724.1-201ENSMUST00000227900 972 ntBASIC4.52□□□□□ -1.69
Ccdc28bQ8CEG5 Olfr204-201ENSMUST00000072517 918 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
Ccdc28bQ8CEG5 Olfr781-201ENSMUST00000075613 936 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
Ccdc28bQ8CEG5 Olfr640-201ENSMUST00000084799 945 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
Ccdc28bQ8CEG5 4930567H17Rik-201ENSMUST00000092405 840 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
Ccdc28bQ8CEG5 Elavl4-205ENSMUST00000106600 3799 ntTSL 5 BASIC4.52□□□□□ -1.69
Ccdc28bQ8CEG5 Arhgef6-201ENSMUST00000033468 4569 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
Ccdc28bQ8CEG5 Serpinb9f-201ENSMUST00000075515 1912 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
Ccdc28bQ8CEG5 Vmn1r185-213ENSMUST00000228676 5199 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
Ccdc28bQ8CEG5 Obox4-ps27-201ENSMUST00000179203 1362 ntBASIC4.52□□□□□ -1.69
Ccdc28bQ8CEG5 Obox4-ps12-201ENSMUST00000180084 1362 ntBASIC4.52□□□□□ -1.69
Ccdc28bQ8CEG5 Gm42946-201ENSMUST00000196108 2570 ntBASIC4.52□□□□□ -1.69
Ccdc28bQ8CEG5 Gm3623-201ENSMUST00000173643 2747 ntBASIC4.52□□□□□ -1.69
Retrieved 100 of 76,532 protein–RNA pairs in 59.4 ms