Protein–RNA interactions for Protein: Q8C9S8

Atg4a, Cysteine protease ATG4A, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4aQ8C9S8 Gm42520-201ENSMUST00000199642 1502 ntBASIC5.33□□□□□ -1.56
Atg4aQ8C9S8 Gm21778-202ENSMUST00000185926 1482 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Atg4aQ8C9S8 Zfp595-201ENSMUST00000109735 3896 ntAPPRIS P2 TSL 1 (best) BASIC5.32□□□□□ -1.56
Atg4aQ8C9S8 Gm26996-201ENSMUST00000204418 1359 ntBASIC5.32□□□□□ -1.56
Atg4aQ8C9S8 Gm45697-201ENSMUST00000212893 2876 ntBASIC5.32□□□□□ -1.56
Atg4aQ8C9S8 Vmn1r32-201ENSMUST00000079584 2833 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Atg4aQ8C9S8 Gm26523-201ENSMUST00000180713 1658 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Atg4aQ8C9S8 Olfr1501-202ENSMUST00000208493 4230 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
Atg4aQ8C9S8 Smpx-202ENSMUST00000112520 503 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Atg4aQ8C9S8 Gm11878-201ENSMUST00000117908 400 ntBASIC5.32□□□□□ -1.56
Atg4aQ8C9S8 Gm11698-201ENSMUST00000117948 455 ntBASIC5.32□□□□□ -1.56
Atg4aQ8C9S8 Klrc1-203ENSMUST00000118447 684 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
Atg4aQ8C9S8 Gm12222-201ENSMUST00000121368 260 ntBASIC5.32□□□□□ -1.56
Atg4aQ8C9S8 Gm13162-201ENSMUST00000121481 454 ntBASIC5.32□□□□□ -1.56
Atg4aQ8C9S8 Gm8200-201ENSMUST00000122390 222 ntBASIC5.32□□□□□ -1.56
Atg4aQ8C9S8 Gm25047-201ENSMUST00000122667 104 ntBASIC5.32□□□□□ -1.56
Atg4aQ8C9S8 Gm12224-202ENSMUST00000127107 726 ntTSL 3 BASIC5.32□□□□□ -1.56
Atg4aQ8C9S8 2810403D21Rik-206ENSMUST00000151166 1107 ntTSL 3 BASIC5.32□□□□□ -1.56
Atg4aQ8C9S8 Gm24444-201ENSMUST00000157244 308 ntBASIC5.32□□□□□ -1.56
Atg4aQ8C9S8 Gm25278-201ENSMUST00000157267 120 ntBASIC5.32□□□□□ -1.56
Atg4aQ8C9S8 Gm5916-201ENSMUST00000168452 1142 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Atg4aQ8C9S8 Gm28803-201ENSMUST00000190385 764 ntBASIC5.32□□□□□ -1.56
Atg4aQ8C9S8 Gm43586-201ENSMUST00000195948 310 ntBASIC5.32□□□□□ -1.56
Atg4aQ8C9S8 Gm43710-201ENSMUST00000199583 452 ntBASIC5.32□□□□□ -1.56
Atg4aQ8C9S8 Olfr663-201ENSMUST00000209914 959 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
Atg4aQ8C9S8 AC122305.3-201ENSMUST00000214762 361 ntTSL 3 BASIC5.32□□□□□ -1.56
Atg4aQ8C9S8 AC159297.1-201ENSMUST00000218689 290 ntBASIC5.32□□□□□ -1.56
Atg4aQ8C9S8 AC167202.1-201ENSMUST00000219027 331 ntBASIC5.32□□□□□ -1.56
Atg4aQ8C9S8 Gm41002-201ENSMUST00000222479 312 ntTSL 3 BASIC5.32□□□□□ -1.56
Atg4aQ8C9S8 Rps24-205ENSMUST00000223999 525 ntAPPRIS ALT1 BASIC5.32□□□□□ -1.56
Atg4aQ8C9S8 Acbd7-202ENSMUST00000228935 534 ntAPPRIS ALT1 BASIC5.32□□□□□ -1.56
Atg4aQ8C9S8 Olfr803-201ENSMUST00000056736 927 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
Atg4aQ8C9S8 Vmn1r226-201ENSMUST00000061756 897 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
Atg4aQ8C9S8 4930504O13Rik-201ENSMUST00000064614 549 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Atg4aQ8C9S8 Tas2r113-201ENSMUST00000079035 930 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
Atg4aQ8C9S8 Gm20449-201ENSMUST00000094532 3847 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
Atg4aQ8C9S8 Olfr424-202ENSMUST00000214751 1642 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Atg4aQ8C9S8 Gucy2f-201ENSMUST00000042530 8122 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Atg4aQ8C9S8 Olfr247-202ENSMUST00000215871 1983 ntAPPRIS P5 TSL 5 BASIC5.32□□□□□ -1.56
Atg4aQ8C9S8 Zfp120-203ENSMUST00000109931 4033 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Atg4aQ8C9S8 Zfp989-202ENSMUST00000146688 2295 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Atg4aQ8C9S8 Vmn1r171-204ENSMUST00000226733 2918 ntAPPRIS ALT2 BASIC5.32□□□□□ -1.56
Atg4aQ8C9S8 Macc1-201ENSMUST00000048880 3818 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Atg4aQ8C9S8 Gm37639-201ENSMUST00000191623 2785 ntBASIC5.32□□□□□ -1.56
Atg4aQ8C9S8 Gm37703-201ENSMUST00000192292 1784 ntBASIC5.32□□□□□ -1.56
Atg4aQ8C9S8 Gm281-201ENSMUST00000144914 2952 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Atg4aQ8C9S8 Olfr808-202ENSMUST00000203236 4523 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
Atg4aQ8C9S8 Gm884-201ENSMUST00000059279 10977 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Atg4aQ8C9S8 Ptprd-204ENSMUST00000102834 8084 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Atg4aQ8C9S8 Adgrg2-203ENSMUST00000112401 4632 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
Atg4aQ8C9S8 Adgrg2-205ENSMUST00000112404 4601 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
Atg4aQ8C9S8 Adgrg2-206ENSMUST00000112405 4634 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
Atg4aQ8C9S8 Olfr984-202ENSMUST00000213858 5186 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Atg4aQ8C9S8 Serpinb3a-201ENSMUST00000027567 1620 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Atg4aQ8C9S8 Usp9x-201ENSMUST00000089302 11887 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Atg4aQ8C9S8 Gm44220-201ENSMUST00000203784 2487 ntBASIC5.31□□□□□ -1.56
Atg4aQ8C9S8 Gm14305-201ENSMUST00000108980 1167 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Atg4aQ8C9S8 Gm11633-201ENSMUST00000118176 444 ntBASIC5.31□□□□□ -1.56
Atg4aQ8C9S8 Gm14933-201ENSMUST00000118840 481 ntBASIC5.31□□□□□ -1.56
Atg4aQ8C9S8 Gm24939-201ENSMUST00000158325 137 ntBASIC5.31□□□□□ -1.56
Atg4aQ8C9S8 Gm11168-203ENSMUST00000178348 672 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
Atg4aQ8C9S8 A630095N17Rik-202ENSMUST00000180101 571 ntAPPRIS P4 TSL 3 BASIC5.31□□□□□ -1.56
Atg4aQ8C9S8 Gm27805-201ENSMUST00000184513 79 ntBASIC5.31□□□□□ -1.56
Atg4aQ8C9S8 Mrgprc4-ps-201ENSMUST00000186018 964 ntBASIC5.31□□□□□ -1.56
Atg4aQ8C9S8 Gm28614-201ENSMUST00000186483 458 ntBASIC5.31□□□□□ -1.56
Atg4aQ8C9S8 Gm28709-201ENSMUST00000186967 456 ntTSL 5 BASIC5.31□□□□□ -1.56
Atg4aQ8C9S8 Gm28612-201ENSMUST00000189214 416 ntTSL 5 BASIC5.31□□□□□ -1.56
Atg4aQ8C9S8 Gm45458-201ENSMUST00000209900 522 ntBASIC5.31□□□□□ -1.56
Atg4aQ8C9S8 AC153526.4-201ENSMUST00000217713 379 ntBASIC5.31□□□□□ -1.56
Atg4aQ8C9S8 Gm36423-204ENSMUST00000222446 541 ntTSL 2 BASIC5.31□□□□□ -1.56
Atg4aQ8C9S8 Gm33958-201ENSMUST00000222879 450 ntTSL 5 BASIC5.31□□□□□ -1.56
Atg4aQ8C9S8 Gm46401-202ENSMUST00000223425 803 ntTSL 5 BASIC5.31□□□□□ -1.56
Atg4aQ8C9S8 AC131117.2-203ENSMUST00000225886 950 ntBASIC5.31□□□□□ -1.56
Atg4aQ8C9S8 AC154626.1-201ENSMUST00000226070 311 ntBASIC5.31□□□□□ -1.56
Atg4aQ8C9S8 Olfr430-201ENSMUST00000055873 954 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
Atg4aQ8C9S8 Olfr884-201ENSMUST00000077732 930 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
Atg4aQ8C9S8 Smgc-201ENSMUST00000088555 2977 ntAPPRIS P2 TSL 1 (best) BASIC5.31□□□□□ -1.56
Atg4aQ8C9S8 Rif1-201ENSMUST00000112693 8509 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Atg4aQ8C9S8 Gm21037-201ENSMUST00000209086 2608 ntBASIC5.31□□□□□ -1.56
Atg4aQ8C9S8 Olfr397-202ENSMUST00000213134 4048 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Atg4aQ8C9S8 Olfr1252-203ENSMUST00000216203 3243 ntAPPRIS P1 TSL 3 BASIC5.31□□□□□ -1.56
Atg4aQ8C9S8 Gm43990-201ENSMUST00000203790 1691 ntBASIC5.31□□□□□ -1.56
Atg4aQ8C9S8 Olfr112-204ENSMUST00000208832 3173 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Atg4aQ8C9S8 AC154573.1-201ENSMUST00000225913 4659 ntBASIC5.3□□□□□ -1.56
Atg4aQ8C9S8 Gm42479-201ENSMUST00000198654 1356 ntBASIC5.3□□□□□ -1.56
Atg4aQ8C9S8 Serpina6-201ENSMUST00000044159 1605 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Atg4aQ8C9S8 Gm45131-201ENSMUST00000208051 2582 ntBASIC5.3□□□□□ -1.56
Atg4aQ8C9S8 Mapk8-203ENSMUST00000111943 1310 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Atg4aQ8C9S8 Vmn1r30-204ENSMUST00000228577 1968 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
Atg4aQ8C9S8 4930503E14Rik-201ENSMUST00000100688 1287 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Atg4aQ8C9S8 Gm10999-201ENSMUST00000108743 207 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Atg4aQ8C9S8 Gm14304-201ENSMUST00000117272 446 ntBASIC5.3□□□□□ -1.56
Atg4aQ8C9S8 Gm12985-201ENSMUST00000118376 183 ntBASIC5.3□□□□□ -1.56
Atg4aQ8C9S8 Sult2a-ps2-201ENSMUST00000121135 405 ntBASIC5.3□□□□□ -1.56
Atg4aQ8C9S8 Gm15338-201ENSMUST00000151884 552 ntTSL 3 BASIC5.3□□□□□ -1.56
Atg4aQ8C9S8 Gm22312-201ENSMUST00000158005 130 ntBASIC5.3□□□□□ -1.56
Atg4aQ8C9S8 Vmn1r116-201ENSMUST00000164288 924 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
Atg4aQ8C9S8 Vmn1r152-201ENSMUST00000168326 924 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
Atg4aQ8C9S8 Vmn1r95-201ENSMUST00000168984 924 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
Atg4aQ8C9S8 Vmn1r104-201ENSMUST00000169689 924 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 92.8 ms