Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 Gm19950-204ENSMUST00000208167 4196 ntTSL 5 BASIC6.91□□□□□ -1.3
Usp40Q8BWR4 Zfp760-201ENSMUST00000073312 4209 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Usp40Q8BWR4 Nipal1-201ENSMUST00000087212 4206 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Usp40Q8BWR4 Mug1-201ENSMUST00000032228 4657 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Usp40Q8BWR4 Cntn1-201ENSMUST00000000109 5646 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Usp40Q8BWR4 Flrt2-201ENSMUST00000057324 7099 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Usp40Q8BWR4 Sh2d1b1-201ENSMUST00000179976 2544 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Usp40Q8BWR4 Fmo2-201ENSMUST00000045902 4066 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Usp40Q8BWR4 Gm10440-201ENSMUST00000197424 2753 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Usp40Q8BWR4 Txndc8-201ENSMUST00000102897 620 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Usp40Q8BWR4 Gm12237-201ENSMUST00000120158 470 ntBASIC6.91□□□□□ -1.3
Usp40Q8BWR4 Gm11910-201ENSMUST00000121624 432 ntBASIC6.91□□□□□ -1.3
Usp40Q8BWR4 Clec5a-203ENSMUST00000129948 858 ntAPPRIS P4 TSL 1 (best) BASIC6.91□□□□□ -1.3
Usp40Q8BWR4 Gm3669-203ENSMUST00000133259 677 ntTSL 2 BASIC6.91□□□□□ -1.3
Usp40Q8BWR4 Gm15632-201ENSMUST00000135936 246 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Usp40Q8BWR4 Gm14974-202ENSMUST00000150003 677 ntTSL 2 BASIC6.91□□□□□ -1.3
Usp40Q8BWR4 Gm2165-204ENSMUST00000153493 677 ntTSL 2 BASIC6.91□□□□□ -1.3
Usp40Q8BWR4 Gm11339-201ENSMUST00000154766 490 ntTSL 5 BASIC6.91□□□□□ -1.3
Usp40Q8BWR4 Gm2101-205ENSMUST00000156730 677 ntTSL 2 BASIC6.91□□□□□ -1.3
Usp40Q8BWR4 Gm21617-201ENSMUST00000188297 691 ntBASIC6.91□□□□□ -1.3
Usp40Q8BWR4 Gm29263-201ENSMUST00000188718 463 ntBASIC6.91□□□□□ -1.3
Usp40Q8BWR4 Gm29545-201ENSMUST00000188878 694 ntBASIC6.91□□□□□ -1.3
Usp40Q8BWR4 Gm43015-201ENSMUST00000199087 565 ntBASIC6.91□□□□□ -1.3
Usp40Q8BWR4 Gm2622-201ENSMUST00000200018 471 ntBASIC6.91□□□□□ -1.3
Usp40Q8BWR4 Rab5a-ps-201ENSMUST00000203252 653 ntBASIC6.91□□□□□ -1.3
Usp40Q8BWR4 Sult2a7-202ENSMUST00000209744 792 ntTSL 5 BASIC6.91□□□□□ -1.3
Usp40Q8BWR4 Gm17999-201ENSMUST00000211568 542 ntBASIC6.91□□□□□ -1.3
Usp40Q8BWR4 Olfr1217-202ENSMUST00000213669 3839 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
Usp40Q8BWR4 Olfr942-ps1-201ENSMUST00000215640 662 ntBASIC6.91□□□□□ -1.3
Usp40Q8BWR4 3830408C21Rik-203ENSMUST00000224293 822 ntBASIC6.91□□□□□ -1.3
Usp40Q8BWR4 AC154840.1-201ENSMUST00000225216 408 ntBASIC6.91□□□□□ -1.3
Usp40Q8BWR4 Olfr202-201ENSMUST00000049859 924 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
Usp40Q8BWR4 Olfr429-201ENSMUST00000060693 943 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
Usp40Q8BWR4 Olfr1436-201ENSMUST00000087812 948 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
Usp40Q8BWR4 Dnah1-201ENSMUST00000048603 12872 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
Usp40Q8BWR4 Neb-201ENSMUST00000028320 10298 ntTSL 5 BASIC6.91□□□□□ -1.3
Usp40Q8BWR4 Olfr532-203ENSMUST00000213801 4232 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
Usp40Q8BWR4 Olfr457-203ENSMUST00000204324 4275 ntAPPRIS P1 TSL 3 BASIC6.91□□□□□ -1.3
Usp40Q8BWR4 Vmn1r52-208ENSMUST00000228665 3226 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
Usp40Q8BWR4 Mbnl1-207ENSMUST00000192607 4552 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Usp40Q8BWR4 Gm6871-202ENSMUST00000110214 1638 ntAPPRIS P5 TSL 5 BASIC6.9□□□□□ -1.3
Usp40Q8BWR4 Gm30332-201ENSMUST00000204221 2345 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
Usp40Q8BWR4 Gm45001-201ENSMUST00000208279 2515 ntBASIC6.9□□□□□ -1.3
Usp40Q8BWR4 Ceacam3-201ENSMUST00000108491 3261 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.3
Usp40Q8BWR4 Pdc-202ENSMUST00000185698 3335 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
Usp40Q8BWR4 Dnase2b-202ENSMUST00000200633 2685 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Usp40Q8BWR4 Cenpj-201ENSMUST00000065302 4363 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Usp40Q8BWR4 C920009B18Rik-202ENSMUST00000181223 4535 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
Usp40Q8BWR4 Gm21637-201ENSMUST00000105124 778 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
Usp40Q8BWR4 Smpx-203ENSMUST00000112521 898 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Usp40Q8BWR4 Gm14360-201ENSMUST00000120670 393 ntBASIC6.9□□□□□ -1.3
Usp40Q8BWR4 Gm13484-201ENSMUST00000120738 412 ntBASIC6.9□□□□□ -1.3
Usp40Q8BWR4 Gm15168-201ENSMUST00000121057 316 ntBASIC6.9□□□□□ -1.3
Usp40Q8BWR4 Gm13209-201ENSMUST00000138492 494 ntTSL 5 BASIC6.9□□□□□ -1.3
Usp40Q8BWR4 Gm4725-201ENSMUST00000151048 587 ntBASIC6.9□□□□□ -1.3
Usp40Q8BWR4 Gm16321-201ENSMUST00000155184 574 ntTSL 3 BASIC6.9□□□□□ -1.3
Usp40Q8BWR4 Gm26034-201ENSMUST00000158154 116 ntBASIC6.9□□□□□ -1.3
Usp40Q8BWR4 Fabp7-202ENSMUST00000165013 880 ntTSL 2 BASIC6.9□□□□□ -1.3
Usp40Q8BWR4 Gm18128-201ENSMUST00000172625 511 ntBASIC6.9□□□□□ -1.3
Usp40Q8BWR4 Tex50-202ENSMUST00000178511 954 ntAPPRIS P1 TSL 3 BASIC6.9□□□□□ -1.3
Usp40Q8BWR4 Mir6410-201ENSMUST00000184204 104 ntBASIC6.9□□□□□ -1.3
Usp40Q8BWR4 Gm21742-201ENSMUST00000189352 548 ntBASIC6.9□□□□□ -1.3
Usp40Q8BWR4 Gm8458-201ENSMUST00000196658 819 ntBASIC6.9□□□□□ -1.3
Usp40Q8BWR4 Gm43309-201ENSMUST00000200837 458 ntBASIC6.9□□□□□ -1.3
Usp40Q8BWR4 Gm42761-201ENSMUST00000201899 738 ntTSL 3 BASIC6.9□□□□□ -1.3
Usp40Q8BWR4 Gm8999-201ENSMUST00000204951 969 ntBASIC6.9□□□□□ -1.3
Usp40Q8BWR4 Gm19232-201ENSMUST00000211621 652 ntBASIC6.9□□□□□ -1.3
Usp40Q8BWR4 Gm31786-202ENSMUST00000212428 676 ntTSL 3 BASIC6.9□□□□□ -1.3
Usp40Q8BWR4 Gm45722-201ENSMUST00000213075 466 ntBASIC6.9□□□□□ -1.3
Usp40Q8BWR4 AC159896.3-201ENSMUST00000215904 3835 ntBASIC6.9□□□□□ -1.3
Usp40Q8BWR4 CT571256.1-201ENSMUST00000226045 585 ntBASIC6.9□□□□□ -1.3
Usp40Q8BWR4 AC129935.1-201ENSMUST00000226302 873 ntBASIC6.9□□□□□ -1.3
Usp40Q8BWR4 Olfr1052-201ENSMUST00000054746 940 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
Usp40Q8BWR4 Gm43638-201ENSMUST00000201519 2297 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.31
Usp40Q8BWR4 Zc3h14-201ENSMUST00000021399 1430 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
Usp40Q8BWR4 Lypd6-205ENSMUST00000169232 3499 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
Usp40Q8BWR4 Gm43843-201ENSMUST00000202396 1587 ntBASIC6.9□□□□□ -1.31
Usp40Q8BWR4 Olfr1465-202ENSMUST00000207340 1561 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.31
Usp40Q8BWR4 Gm43528-201ENSMUST00000199492 1674 ntBASIC6.9□□□□□ -1.31
Usp40Q8BWR4 Mecom-212ENSMUST00000173495 5066 ntAPPRIS P5 TSL 5 BASIC6.9□□□□□ -1.31
Usp40Q8BWR4 Gm14569-204ENSMUST00000169499 5181 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.31
Usp40Q8BWR4 Tet1-206ENSMUST00000174189 14369 ntAPPRIS ALT2 TSL 5 BASIC6.9□□□□□ -1.31
Usp40Q8BWR4 Olfr1186-203ENSMUST00000216978 1745 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.31
Usp40Q8BWR4 Gm4070-201ENSMUST00000106766 8795 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
Usp40Q8BWR4 Gvin1-201ENSMUST00000006667 8795 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
Usp40Q8BWR4 Olfr736-205ENSMUST00000215263 2255 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
Usp40Q8BWR4 Mier1-202ENSMUST00000097945 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
Usp40Q8BWR4 Gm10723-201ENSMUST00000195366 6918 ntBASIC6.89□□□□□ -1.31
Usp40Q8BWR4 Olfr390-204ENSMUST00000215161 3740 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
Usp40Q8BWR4 Mir290a-201ENSMUST00000104627 83 ntBASIC6.89□□□□□ -1.31
Usp40Q8BWR4 Gm14979-201ENSMUST00000121561 1035 ntBASIC6.89□□□□□ -1.31
Usp40Q8BWR4 Gm6568-201ENSMUST00000122274 697 ntBASIC6.89□□□□□ -1.31
Usp40Q8BWR4 Gm23897-201ENSMUST00000158110 158 ntBASIC6.89□□□□□ -1.31
Usp40Q8BWR4 Gm25861-201ENSMUST00000158251 109 ntBASIC6.89□□□□□ -1.31
Usp40Q8BWR4 Gm8374-201ENSMUST00000163826 672 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
Usp40Q8BWR4 Gm8871-202ENSMUST00000168945 549 ntAPPRIS ALT2 TSL 5 BASIC6.89□□□□□ -1.31
Usp40Q8BWR4 Gm23633-201ENSMUST00000175293 119 ntBASIC6.89□□□□□ -1.31
Usp40Q8BWR4 Gm22111-201ENSMUST00000178010 79 ntBASIC6.89□□□□□ -1.31
Usp40Q8BWR4 Gm16430-202ENSMUST00000178145 703 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Usp40Q8BWR4 Gm23687-201ENSMUST00000178664 79 ntBASIC6.89□□□□□ -1.31
Retrieved 100 of 76,532 protein–RNA pairs in 90.8 ms