Protein–RNA interactions for Protein: Q3UWA4

Trim40, Tripartite motif-containing protein 40, mousemouse

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40Q3UWA4 4930401A07Rik-201ENSMUST00000214657 746 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
Trim40Q3UWA4 H60c-203ENSMUST00000216211 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
Trim40Q3UWA4 Gm18242-201ENSMUST00000218455 542 ntBASIC4.33□□□□□ -1.72
Trim40Q3UWA4 AC166263.1-201ENSMUST00000218586 238 ntBASIC4.33□□□□□ -1.72
Trim40Q3UWA4 AC124687.2-201ENSMUST00000221927 1228 ntTSL 5 BASIC4.33□□□□□ -1.72
Trim40Q3UWA4 Ly6e-ps1-201ENSMUST00000222501 367 ntBASIC4.33□□□□□ -1.72
Trim40Q3UWA4 AC154371.1-201ENSMUST00000226600 412 ntBASIC4.33□□□□□ -1.72
Trim40Q3UWA4 Vmn1r16-201ENSMUST00000227168 912 ntAPPRIS P2 BASIC4.33□□□□□ -1.72
Trim40Q3UWA4 Gnrhr-201ENSMUST00000031172 1211 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Trim40Q3UWA4 Gm24706-201ENSMUST00000082806 137 ntBASIC4.33□□□□□ -1.72
Trim40Q3UWA4 Olfr1221-201ENSMUST00000099795 936 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
Trim40Q3UWA4 Olfr1218-201ENSMUST00000099798 936 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
Trim40Q3UWA4 Olfr1049-201ENSMUST00000099899 953 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
Trim40Q3UWA4 Olfr995-201ENSMUST00000099924 1113 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
Trim40Q3UWA4 Wdr17-209ENSMUST00000150488 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
Trim40Q3UWA4 Olfr992-203ENSMUST00000214895 2222 ntAPPRIS P1 TSL 3 BASIC4.33□□□□□ -1.72
Trim40Q3UWA4 AC156025.1-201ENSMUST00000223597 3551 ntBASIC4.33□□□□□ -1.72
Trim40Q3UWA4 Gm38104-201ENSMUST00000195121 1895 ntBASIC4.32□□□□□ -1.72
Trim40Q3UWA4 Steap2-204ENSMUST00000115426 10408 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Trim40Q3UWA4 Olfr1493-ps1-201ENSMUST00000207208 1777 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
Trim40Q3UWA4 Cntn3-201ENSMUST00000032159 5183 ntAPPRIS P1 TSL 2 BASIC4.32□□□□□ -1.72
Trim40Q3UWA4 Atrx-202ENSMUST00000113573 10275 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Trim40Q3UWA4 9430018G01Rik-201ENSMUST00000203260 3758 ntTSL 5 BASIC4.32□□□□□ -1.72
Trim40Q3UWA4 AC135119.1-201ENSMUST00000227935 3717 ntBASIC4.32□□□□□ -1.72
Trim40Q3UWA4 Olfr1020-202ENSMUST00000215347 2640 ntAPPRIS P1 TSL 3 BASIC4.32□□□□□ -1.72
Trim40Q3UWA4 Mcmdc2-205ENSMUST00000171802 2553 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
Trim40Q3UWA4 Gm830-201ENSMUST00000142458 3502 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Trim40Q3UWA4 Olfr672-202ENSMUST00000213942 1490 ntAPPRIS P1 TSL 3 BASIC4.32□□□□□ -1.72
Trim40Q3UWA4 AY358078-201ENSMUST00000053821 1461 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Trim40Q3UWA4 Vmn1r52-202ENSMUST00000226520 3125 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
Trim40Q3UWA4 Gm36931-201ENSMUST00000192997 4801 ntBASIC4.32□□□□□ -1.72
Trim40Q3UWA4 Gm29293-201ENSMUST00000189416 2188 ntBASIC4.32□□□□□ -1.72
Trim40Q3UWA4 Pign-201ENSMUST00000070699 6528 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
Trim40Q3UWA4 Gm23910-201ENSMUST00000104597 132 ntBASIC4.32□□□□□ -1.72
Trim40Q3UWA4 Vmn1r124-201ENSMUST00000105200 924 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
Trim40Q3UWA4 Gm17106-201ENSMUST00000105610 459 ntTSL 5 BASIC4.32□□□□□ -1.72
Trim40Q3UWA4 Hbb-bh2-201ENSMUST00000106866 558 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Trim40Q3UWA4 Ccdc7b-203ENSMUST00000108745 1047 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Trim40Q3UWA4 Defb42-202ENSMUST00000111203 567 ntAPPRIS P1 TSL 3 BASIC4.32□□□□□ -1.72
Trim40Q3UWA4 Gm3020-201ENSMUST00000112801 450 ntTSL 5 BASIC4.32□□□□□ -1.72
Trim40Q3UWA4 Gm13250-201ENSMUST00000117209 753 ntBASIC4.32□□□□□ -1.72
Trim40Q3UWA4 Gm12001-201ENSMUST00000121727 913 ntBASIC4.32□□□□□ -1.72
Trim40Q3UWA4 Gm24628-201ENSMUST00000122761 289 ntBASIC4.32□□□□□ -1.72
Trim40Q3UWA4 Gm15584-201ENSMUST00000123231 759 ntTSL 2 BASIC4.32□□□□□ -1.72
Trim40Q3UWA4 Gm11967-201ENSMUST00000135132 480 ntTSL 2 BASIC4.32□□□□□ -1.72
Trim40Q3UWA4 Gm23960-201ENSMUST00000157206 131 ntBASIC4.32□□□□□ -1.72
Trim40Q3UWA4 Gm25553-201ENSMUST00000158076 79 ntBASIC4.32□□□□□ -1.72
Trim40Q3UWA4 Mir3060-201ENSMUST00000175339 83 ntBASIC4.32□□□□□ -1.72
Trim40Q3UWA4 Vmn1r-ps48-201ENSMUST00000176352 886 ntBASIC4.32□□□□□ -1.72
Trim40Q3UWA4 Gm27602-201ENSMUST00000183861 111 ntBASIC4.32□□□□□ -1.72
Trim40Q3UWA4 Gm27457-201ENSMUST00000184771 156 ntBASIC4.32□□□□□ -1.72
Trim40Q3UWA4 Gm27492-201ENSMUST00000185194 187 ntBASIC4.32□□□□□ -1.72
Trim40Q3UWA4 Gm29513-201ENSMUST00000185741 202 ntBASIC4.32□□□□□ -1.72
Trim40Q3UWA4 Gm28263-201ENSMUST00000185884 400 ntBASIC4.32□□□□□ -1.72
Trim40Q3UWA4 1700101O22Rik-201ENSMUST00000187396 339 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Trim40Q3UWA4 Olfr1391-201ENSMUST00000187509 938 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
Trim40Q3UWA4 Gm28830-201ENSMUST00000188192 213 ntBASIC4.32□□□□□ -1.72
Trim40Q3UWA4 Gm37881-201ENSMUST00000193001 421 ntBASIC4.32□□□□□ -1.72
Trim40Q3UWA4 Gm38008-201ENSMUST00000195333 518 ntBASIC4.32□□□□□ -1.72
Trim40Q3UWA4 Gm30043-201ENSMUST00000196689 733 ntTSL 2 BASIC4.32□□□□□ -1.72
Trim40Q3UWA4 4930539C22Rik-201ENSMUST00000198231 970 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Trim40Q3UWA4 Gm44079-201ENSMUST00000204889 529 ntTSL 5 BASIC4.32□□□□□ -1.72
Trim40Q3UWA4 Gm44876-201ENSMUST00000205394 670 ntTSL 3 BASIC4.32□□□□□ -1.72
Trim40Q3UWA4 Gm8748-201ENSMUST00000211125 587 ntBASIC4.32□□□□□ -1.72
Trim40Q3UWA4 CT486006.1-201ENSMUST00000216797 227 ntTSL 5 BASIC4.32□□□□□ -1.72
Trim40Q3UWA4 Gm3800-201ENSMUST00000221086 554 ntBASIC4.32□□□□□ -1.72
Trim40Q3UWA4 AC164116.1-201ENSMUST00000225810 622 ntBASIC4.32□□□□□ -1.72
Trim40Q3UWA4 AC114572.1-201ENSMUST00000227262 300 ntBASIC4.32□□□□□ -1.72
Trim40Q3UWA4 AC155167.1-201ENSMUST00000228931 614 ntBASIC4.32□□□□□ -1.72
Trim40Q3UWA4 Cst9-201ENSMUST00000028935 687 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Trim40Q3UWA4 Creg1-201ENSMUST00000040298 425 ntTSL 3 BASIC4.32□□□□□ -1.72
Trim40Q3UWA4 Gm5215-201ENSMUST00000054380 405 ntBASIC4.32□□□□□ -1.72
Trim40Q3UWA4 Olfr1257-201ENSMUST00000060795 1016 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
Trim40Q3UWA4 Olfr307-201ENSMUST00000069279 1012 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
Trim40Q3UWA4 Prelid2-201ENSMUST00000070949 724 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Trim40Q3UWA4 Olfr488-201ENSMUST00000072968 945 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
Trim40Q3UWA4 Olfr948-201ENSMUST00000076516 966 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
Trim40Q3UWA4 Gm26437-201ENSMUST00000082595 105 ntBASIC4.32□□□□□ -1.72
Trim40Q3UWA4 Gm9386-201ENSMUST00000095195 381 ntBASIC4.32□□□□□ -1.72
Trim40Q3UWA4 Gm10794-201ENSMUST00000099624 207 ntBASIC4.32□□□□□ -1.72
Trim40Q3UWA4 Olfr1090-201ENSMUST00000099875 942 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
Trim40Q3UWA4 Cd28-201ENSMUST00000027165 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Trim40Q3UWA4 Olfr1167-202ENSMUST00000216951 4276 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
Trim40Q3UWA4 Olfr1263-204ENSMUST00000217065 4186 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
Trim40Q3UWA4 Gm3665-201ENSMUST00000177214 2461 ntBASIC4.32□□□□□ -1.72
Trim40Q3UWA4 Vmn2r-ps51-201ENSMUST00000177271 2461 ntBASIC4.32□□□□□ -1.72
Trim40Q3UWA4 9630002D21Rik-202ENSMUST00000222033 2345 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Trim40Q3UWA4 Slfn8-202ENSMUST00000092838 3529 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
Trim40Q3UWA4 Gm42986-201ENSMUST00000201618 3385 ntBASIC4.31□□□□□ -1.72
Trim40Q3UWA4 AC160130.1-201ENSMUST00000220734 2735 ntBASIC4.31□□□□□ -1.72
Trim40Q3UWA4 B130011K05Rik-201ENSMUST00000151765 3270 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Trim40Q3UWA4 Gab3-203ENSMUST00000114109 2093 ntTSL 2 BASIC4.31□□□□□ -1.72
Trim40Q3UWA4 AC154313.1-201ENSMUST00000217755 3841 ntBASIC4.31□□□□□ -1.72
Trim40Q3UWA4 Vmn2r26-201ENSMUST00000032238 2568 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Trim40Q3UWA4 3110080E11Rik-201ENSMUST00000210736 3477 ntBASIC4.31□□□□□ -1.72
Trim40Q3UWA4 Esp3-201ENSMUST00000177574 1316 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Trim40Q3UWA4 Gm37407-201ENSMUST00000194793 1316 ntBASIC4.31□□□□□ -1.72
Trim40Q3UWA4 Gm43341-201ENSMUST00000200104 1308 ntBASIC4.31□□□□□ -1.72
Trim40Q3UWA4 Gm44897-201ENSMUST00000206187 1341 ntBASIC4.31□□□□□ -1.72
Trim40Q3UWA4 Gm2396-202ENSMUST00000188232 3433 ntTSL 5 BASIC4.31□□□□□ -1.72
Retrieved 100 of 76,532 protein–RNA pairs in 84 ms