Protein–RNA interactions for Protein: Q3UDK1

Trafd1, TRAF-type zinc finger domain-containing protein 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trafd1Q3UDK1 Gm27165-201ENSMUST00000183951 232 ntBASIC4.47□□□□□ -1.69
Trafd1Q3UDK1 BE692007-201ENSMUST00000186054 954 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
Trafd1Q3UDK1 1700016P04Rik-201ENSMUST00000186770 429 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
Trafd1Q3UDK1 4930440C22Rik-202ENSMUST00000190754 512 ntTSL 3 BASIC4.47□□□□□ -1.69
Trafd1Q3UDK1 Gm38046-201ENSMUST00000192733 550 ntBASIC4.47□□□□□ -1.69
Trafd1Q3UDK1 Gm37710-201ENSMUST00000193501 1274 ntBASIC4.47□□□□□ -1.69
Trafd1Q3UDK1 Gm43371-201ENSMUST00000202838 1031 ntBASIC4.47□□□□□ -1.69
Trafd1Q3UDK1 Gm44757-201ENSMUST00000206373 157 ntBASIC4.47□□□□□ -1.69
Trafd1Q3UDK1 Gm45236-201ENSMUST00000208632 229 ntBASIC4.47□□□□□ -1.69
Trafd1Q3UDK1 Gm30676-201ENSMUST00000214000 1165 ntTSL 5 BASIC4.47□□□□□ -1.69
Trafd1Q3UDK1 CAAA01216754.4-201ENSMUST00000216416 802 ntTSL 5 BASIC4.47□□□□□ -1.69
Trafd1Q3UDK1 AC165164.1-202ENSMUST00000219324 649 ntTSL 3 BASIC4.47□□□□□ -1.69
Trafd1Q3UDK1 Gm40477-202ENSMUST00000221505 881 ntTSL 3 BASIC4.47□□□□□ -1.69
Trafd1Q3UDK1 AC154371.1-201ENSMUST00000226600 412 ntBASIC4.47□□□□□ -1.69
Trafd1Q3UDK1 Prl3d2-201ENSMUST00000080755 853 ntAPPRIS P2 TSL 5 BASIC4.47□□□□□ -1.69
Trafd1Q3UDK1 Gm22005-201ENSMUST00000082795 141 ntBASIC4.47□□□□□ -1.69
Trafd1Q3UDK1 Angptl3-201ENSMUST00000030280 1482 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
Trafd1Q3UDK1 Zfp287-201ENSMUST00000005399 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
Trafd1Q3UDK1 Gm37764-201ENSMUST00000194664 2150 ntBASIC4.47□□□□□ -1.69
Trafd1Q3UDK1 Gabrg2-203ENSMUST00000109290 2868 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
Trafd1Q3UDK1 Grik1-203ENSMUST00000114137 2894 ntTSL 5 BASIC4.47□□□□□ -1.69
Trafd1Q3UDK1 Gm15394-201ENSMUST00000119656 1308 ntBASIC4.46□□□□□ -1.69
Trafd1Q3UDK1 Gm18719-201ENSMUST00000196696 1413 ntBASIC4.46□□□□□ -1.69
Trafd1Q3UDK1 Hyal5-201ENSMUST00000031689 1838 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.69
Trafd1Q3UDK1 Gm37363-201ENSMUST00000192336 2233 ntBASIC4.46□□□□□ -1.69
Trafd1Q3UDK1 Gm28362-201ENSMUST00000189430 2420 ntBASIC4.46□□□□□ -1.69
Trafd1Q3UDK1 Olfr107-205ENSMUST00000216844 4021 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.69
Trafd1Q3UDK1 Gm13712-201ENSMUST00000117484 2295 ntBASIC4.46□□□□□ -1.7
Trafd1Q3UDK1 Vmn2r-ps42-201ENSMUST00000174123 2083 ntBASIC4.46□□□□□ -1.7
Trafd1Q3UDK1 Gm23608-201ENSMUST00000104545 128 ntBASIC4.46□□□□□ -1.7
Trafd1Q3UDK1 Gm12106-201ENSMUST00000116006 1200 ntBASIC4.46□□□□□ -1.7
Trafd1Q3UDK1 Gm9427-201ENSMUST00000116187 651 ntBASIC4.46□□□□□ -1.7
Trafd1Q3UDK1 Spin2-ps1-201ENSMUST00000116643 875 ntBASIC4.46□□□□□ -1.7
Trafd1Q3UDK1 Gm14304-201ENSMUST00000117272 446 ntBASIC4.46□□□□□ -1.7
Trafd1Q3UDK1 Gm12520-201ENSMUST00000117493 316 ntBASIC4.46□□□□□ -1.7
Trafd1Q3UDK1 Gm7834-201ENSMUST00000117560 437 ntBASIC4.46□□□□□ -1.7
Trafd1Q3UDK1 Gm11781-201ENSMUST00000118328 472 ntBASIC4.46□□□□□ -1.7
Trafd1Q3UDK1 Gm4852-201ENSMUST00000121202 729 ntBASIC4.46□□□□□ -1.7
Trafd1Q3UDK1 Gm3757-201ENSMUST00000125878 675 ntBASIC4.46□□□□□ -1.7
Trafd1Q3UDK1 Gm10059-201ENSMUST00000131139 171 ntBASIC4.46□□□□□ -1.7
Trafd1Q3UDK1 Magea9-ps-201ENSMUST00000140655 732 ntBASIC4.46□□□□□ -1.7
Trafd1Q3UDK1 Gm15445-201ENSMUST00000146700 603 ntTSL 5 BASIC4.46□□□□□ -1.7
Trafd1Q3UDK1 Gm24113-201ENSMUST00000157477 276 ntBASIC4.46□□□□□ -1.7
Trafd1Q3UDK1 Gm25332-201ENSMUST00000158038 105 ntBASIC4.46□□□□□ -1.7
Trafd1Q3UDK1 Gm16571-201ENSMUST00000159112 291 ntBASIC4.46□□□□□ -1.7
Trafd1Q3UDK1 Magea9-ps-202ENSMUST00000167328 899 ntBASIC4.46□□□□□ -1.7
Trafd1Q3UDK1 Spin2-ps6-201ENSMUST00000178459 525 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
Trafd1Q3UDK1 Gm22243-201ENSMUST00000178754 120 ntBASIC4.46□□□□□ -1.7
Trafd1Q3UDK1 Gm21971-201ENSMUST00000180187 337 ntTSL 5 BASIC4.46□□□□□ -1.7
Trafd1Q3UDK1 Gm29588-201ENSMUST00000185738 298 ntBASIC4.46□□□□□ -1.7
Trafd1Q3UDK1 Gm21856-201ENSMUST00000187547 696 ntBASIC4.46□□□□□ -1.7
Trafd1Q3UDK1 1700006F04Rik-201ENSMUST00000188582 441 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
Trafd1Q3UDK1 Gm21735-201ENSMUST00000190360 696 ntBASIC4.46□□□□□ -1.7
Trafd1Q3UDK1 Gm28803-201ENSMUST00000190385 764 ntBASIC4.46□□□□□ -1.7
Trafd1Q3UDK1 Gm46327-201ENSMUST00000218240 365 ntBASIC4.46□□□□□ -1.7
Trafd1Q3UDK1 AC138290.1-201ENSMUST00000219242 820 ntTSL 5 BASIC4.46□□□□□ -1.7
Trafd1Q3UDK1 AC138330.1-201ENSMUST00000220690 1127 ntTSL 5 BASIC4.46□□□□□ -1.7
Trafd1Q3UDK1 AC154239.2-201ENSMUST00000227859 233 ntBASIC4.46□□□□□ -1.7
Trafd1Q3UDK1 Reg3g-201ENSMUST00000032089 771 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
Trafd1Q3UDK1 Iapp-201ENSMUST00000041993 839 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
Trafd1Q3UDK1 Olfr881-201ENSMUST00000074611 948 ntBASIC4.46□□□□□ -1.7
Trafd1Q3UDK1 Olfr804-201ENSMUST00000077312 945 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
Trafd1Q3UDK1 Olfr884-201ENSMUST00000077732 930 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
Trafd1Q3UDK1 Zfp101-204ENSMUST00000174512 3743 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
Trafd1Q3UDK1 4930509J09Rik-201ENSMUST00000194514 1526 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
Trafd1Q3UDK1 9430018G01Rik-201ENSMUST00000203260 3758 ntTSL 5 BASIC4.45□□□□□ -1.7
Trafd1Q3UDK1 Atp1b4-201ENSMUST00000016471 4201 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
Trafd1Q3UDK1 Olfr364-ps1-201ENSMUST00000104995 1766 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
Trafd1Q3UDK1 Rgs21-202ENSMUST00000184189 1674 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
Trafd1Q3UDK1 Slfn8-202ENSMUST00000092838 3529 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
Trafd1Q3UDK1 Gm17101-201ENSMUST00000169520 1588 ntBASIC4.45□□□□□ -1.7
Trafd1Q3UDK1 Mmp1a-201ENSMUST00000034492 2022 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
Trafd1Q3UDK1 Gm44542-201ENSMUST00000208677 4314 ntBASIC4.45□□□□□ -1.7
Trafd1Q3UDK1 Adam34-201ENSMUST00000110411 2584 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
Trafd1Q3UDK1 Cyld-204ENSMUST00000209206 4032 ntTSL 5 BASIC4.45□□□□□ -1.7
Trafd1Q3UDK1 Gm25537-201ENSMUST00000103851 109 ntBASIC4.45□□□□□ -1.7
Trafd1Q3UDK1 Gm23594-201ENSMUST00000104307 134 ntBASIC4.45□□□□□ -1.7
Trafd1Q3UDK1 Slamf7-201ENSMUST00000111276 1082 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
Trafd1Q3UDK1 Gm16082-201ENSMUST00000115992 377 ntBASIC4.45□□□□□ -1.7
Trafd1Q3UDK1 Xlr5d-ps-201ENSMUST00000117501 782 ntBASIC4.45□□□□□ -1.7
Trafd1Q3UDK1 Gm15058-201ENSMUST00000117689 458 ntBASIC4.45□□□□□ -1.7
Trafd1Q3UDK1 Eif3s6-ps1-201ENSMUST00000117907 470 ntBASIC4.45□□□□□ -1.7
Trafd1Q3UDK1 Gm11633-201ENSMUST00000118176 444 ntBASIC4.45□□□□□ -1.7
Trafd1Q3UDK1 Gm12105-201ENSMUST00000120846 779 ntBASIC4.45□□□□□ -1.7
Trafd1Q3UDK1 Gm6031-201ENSMUST00000121314 1054 ntBASIC4.45□□□□□ -1.7
Trafd1Q3UDK1 Gm15591-201ENSMUST00000138539 627 ntTSL 5 BASIC4.45□□□□□ -1.7
Trafd1Q3UDK1 Gm12195-201ENSMUST00000144990 469 ntTSL 3 BASIC4.45□□□□□ -1.7
Trafd1Q3UDK1 Gm24444-201ENSMUST00000157244 308 ntBASIC4.45□□□□□ -1.7
Trafd1Q3UDK1 Gm24251-201ENSMUST00000157324 114 ntBASIC4.45□□□□□ -1.7
Trafd1Q3UDK1 Gm26085-201ENSMUST00000157900 116 ntBASIC4.45□□□□□ -1.7
Trafd1Q3UDK1 Gm16451-201ENSMUST00000173484 924 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
Trafd1Q3UDK1 Gm4707-202ENSMUST00000183937 276 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
Trafd1Q3UDK1 Gm29065-201ENSMUST00000188786 487 ntTSL 3 BASIC4.45□□□□□ -1.7
Trafd1Q3UDK1 4930548G14Rik-202ENSMUST00000190364 1185 ntTSL 2 BASIC4.45□□□□□ -1.7
Trafd1Q3UDK1 Gm19086-201ENSMUST00000190772 665 ntBASIC4.45□□□□□ -1.7
Trafd1Q3UDK1 Gm43015-201ENSMUST00000199087 565 ntBASIC4.45□□□□□ -1.7
Trafd1Q3UDK1 Olfr202-202ENSMUST00000201687 1232 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
Trafd1Q3UDK1 Gm44006-201ENSMUST00000204273 396 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Trafd1Q3UDK1 Gm44849-201ENSMUST00000207595 484 ntBASIC4.45□□□□□ -1.7
Trafd1Q3UDK1 Gm20074-201ENSMUST00000208144 484 ntBASIC4.45□□□□□ -1.7
Retrieved 100 of 76,532 protein–RNA pairs in 74.2 ms