Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Reg3d-202ENSMUST00000167492 644 ntTSL 5 BASIC5.02□□□□□ -1.61
Col8a1Q00780 Znrd1as-203ENSMUST00000173814 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
Col8a1Q00780 Gm22166-201ENSMUST00000178419 121 ntBASIC5.02□□□□□ -1.61
Col8a1Q00780 Gm23288-201ENSMUST00000179213 121 ntBASIC5.02□□□□□ -1.61
Col8a1Q00780 Gm28954-201ENSMUST00000190031 437 ntTSL 5 BASIC5.02□□□□□ -1.61
Col8a1Q00780 Gm28072-202ENSMUST00000190486 352 ntTSL 5 BASIC5.02□□□□□ -1.61
Col8a1Q00780 Gm37719-201ENSMUST00000194615 292 ntBASIC5.02□□□□□ -1.61
Col8a1Q00780 Gm31942-202ENSMUST00000195375 437 ntTSL 5 BASIC5.02□□□□□ -1.61
Col8a1Q00780 Gm9238-201ENSMUST00000196181 329 ntBASIC5.02□□□□□ -1.61
Col8a1Q00780 Gm8454-201ENSMUST00000196980 811 ntBASIC5.02□□□□□ -1.61
Col8a1Q00780 Gm42916-201ENSMUST00000197142 1042 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Col8a1Q00780 Ighv1-79-201ENSMUST00000200152 350 ntBASIC5.02□□□□□ -1.61
Col8a1Q00780 Gm43406-201ENSMUST00000200356 334 ntBASIC5.02□□□□□ -1.61
Col8a1Q00780 Reg3d-203ENSMUST00000205240 544 ntTSL 2 BASIC5.02□□□□□ -1.61
Col8a1Q00780 Gm45171-201ENSMUST00000206360 736 ntBASIC5.02□□□□□ -1.61
Col8a1Q00780 Gm44893-201ENSMUST00000207259 443 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Col8a1Q00780 Gm45857-201ENSMUST00000212207 356 ntBASIC5.02□□□□□ -1.61
Col8a1Q00780 CT033781.1-201ENSMUST00000223128 454 ntTSL 5 BASIC5.02□□□□□ -1.61
Col8a1Q00780 AC154527.1-201ENSMUST00000225809 242 ntBASIC5.02□□□□□ -1.61
Col8a1Q00780 Gm12582-201ENSMUST00000030555 697 ntBASIC5.02□□□□□ -1.61
Col8a1Q00780 Pmch-201ENSMUST00000048621 749 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Col8a1Q00780 Olfr1442-201ENSMUST00000057924 1065 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
Col8a1Q00780 Gm24200-201ENSMUST00000082955 157 ntBASIC5.02□□□□□ -1.61
Col8a1Q00780 n-R5s89-201ENSMUST00000083532 104 ntBASIC5.02□□□□□ -1.61
Col8a1Q00780 Reg3d-201ENSMUST00000089667 782 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Col8a1Q00780 Olfr558-201ENSMUST00000094124 3041 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Col8a1Q00780 Naip6-202ENSMUST00000118574 6827 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Col8a1Q00780 Kcnma1-209ENSMUST00000179097 4596 ntTSL 5 BASIC5.02□□□□□ -1.61
Col8a1Q00780 Rbmy-201ENSMUST00000100360 1708 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Col8a1Q00780 Gm5930-201ENSMUST00000111863 1746 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Col8a1Q00780 Gm10256-202ENSMUST00000188114 1708 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Col8a1Q00780 Gm21708-203ENSMUST00000190283 1708 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Col8a1Q00780 Zfp933-201ENSMUST00000105718 4238 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Col8a1Q00780 Gm18853-201ENSMUST00000183629 3596 ntBASIC5.02□□□□□ -1.61
Col8a1Q00780 Cwf19l1-201ENSMUST00000026218 3574 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Col8a1Q00780 Gm15232-201ENSMUST00000146929 2318 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Col8a1Q00780 Gm13977-201ENSMUST00000133648 4049 ntTSL 5 BASIC5.02□□□□□ -1.61
Col8a1Q00780 Gm4787-201ENSMUST00000062182 2474 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
Col8a1Q00780 Gm44288-201ENSMUST00000205061 2795 ntBASIC5.02□□□□□ -1.61
Col8a1Q00780 Olfr387-ps1-201ENSMUST00000134773 1513 ntAPPRIS P1 TSL 3 BASIC5.02□□□□□ -1.61
Col8a1Q00780 AC107232.1-201ENSMUST00000227785 1503 ntBASIC5.02□□□□□ -1.61
Col8a1Q00780 AC121870.1-201ENSMUST00000216279 4879 ntBASIC5.02□□□□□ -1.61
Col8a1Q00780 Matr3-ps2-201ENSMUST00000160839 1996 ntBASIC5.02□□□□□ -1.61
Col8a1Q00780 Mctp1-201ENSMUST00000109583 2283 ntAPPRIS P2 TSL 5 BASIC5.02□□□□□ -1.61
Col8a1Q00780 Gm42715-201ENSMUST00000189629 12746 ntAPPRIS P5 TSL 5 BASIC5.02□□□□□ -1.61
Col8a1Q00780 Vmn2r111-201ENSMUST00000092491 2574 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Col8a1Q00780 Nsun6-202ENSMUST00000076435 3042 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
Col8a1Q00780 Olfr373-203ENSMUST00000215198 3923 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Col8a1Q00780 4932416K20Rik-201ENSMUST00000093229 3554 ntBASIC5.01□□□□□ -1.61
Col8a1Q00780 Gm44046-201ENSMUST00000203145 2678 ntBASIC5.01□□□□□ -1.61
Col8a1Q00780 Cyp2c65-201ENSMUST00000087236 1928 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Col8a1Q00780 Fcrl6-201ENSMUST00000094303 1912 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
Col8a1Q00780 Gm10727-201ENSMUST00000197107 1602 ntBASIC5.01□□□□□ -1.61
Col8a1Q00780 Tcp1-ps1-201ENSMUST00000120941 1466 ntBASIC5.01□□□□□ -1.61
Col8a1Q00780 Btbd35f9-201ENSMUST00000178219 1497 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
Col8a1Q00780 Btbd35f22-201ENSMUST00000178747 1497 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
Col8a1Q00780 Btbd35f30-201ENSMUST00000179069 1497 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
Col8a1Q00780 Btbd35f25-201ENSMUST00000179086 1497 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
Col8a1Q00780 Btbd35f6-201ENSMUST00000179466 1497 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
Col8a1Q00780 Btbd35f29-201ENSMUST00000179532 1497 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
Col8a1Q00780 Btbd35f8-201ENSMUST00000180004 1497 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
Col8a1Q00780 Btbd35f26-201ENSMUST00000180197 1497 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
Col8a1Q00780 Gm336-201ENSMUST00000186376 1480 ntBASIC5.01□□□□□ -1.61
Col8a1Q00780 Nlrp1b-204ENSMUST00000108516 4134 ntAPPRIS P3 TSL 1 (best) BASIC5.01□□□□□ -1.61
Col8a1Q00780 Ranbp17-201ENSMUST00000037522 3950 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
Col8a1Q00780 Lrrc49-201ENSMUST00000053171 3086 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Col8a1Q00780 Gm37470-201ENSMUST00000193378 2798 ntBASIC5.01□□□□□ -1.61
Col8a1Q00780 Dock2-203ENSMUST00000101365 3785 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Col8a1Q00780 Eif2s3x-201ENSMUST00000050328 3647 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Col8a1Q00780 Gm20826-202ENSMUST00000185348 4605 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
Col8a1Q00780 Vmn1r9-202ENSMUST00000227399 6778 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
Col8a1Q00780 Ctage5-202ENSMUST00000069430 2869 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Col8a1Q00780 Gm11516-201ENSMUST00000118450 1582 ntBASIC5.01□□□□□ -1.61
Col8a1Q00780 Gm38243-201ENSMUST00000194737 1567 ntBASIC5.01□□□□□ -1.61
Col8a1Q00780 Fastkd5-202ENSMUST00000179273 2424 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
Col8a1Q00780 Ahnak-202ENSMUST00000092956 18099 ntAPPRIS P3 TSL 1 (best) BASIC5.01□□□□□ -1.61
Col8a1Q00780 Copg2-201ENSMUST00000048774 3961 ntAPPRIS P2 TSL 1 (best) BASIC5.01□□□□□ -1.61
Col8a1Q00780 Btf3l4-202ENSMUST00000102740 624 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
Col8a1Q00780 Cep112-203ENSMUST00000106718 839 ntTSL 5 BASIC5.01□□□□□ -1.61
Col8a1Q00780 Cd59b-202ENSMUST00000111130 706 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Col8a1Q00780 Gm14352-201ENSMUST00000119250 449 ntBASIC5.01□□□□□ -1.61
Col8a1Q00780 Gm14852-201ENSMUST00000120065 647 ntBASIC5.01□□□□□ -1.61
Col8a1Q00780 Gm12074-201ENSMUST00000120189 219 ntBASIC5.01□□□□□ -1.61
Col8a1Q00780 Gm12654-201ENSMUST00000120387 587 ntBASIC5.01□□□□□ -1.61
Col8a1Q00780 Gm15044-201ENSMUST00000120703 598 ntBASIC5.01□□□□□ -1.61
Col8a1Q00780 Gm13788-201ENSMUST00000120767 601 ntBASIC5.01□□□□□ -1.61
Col8a1Q00780 Gm13745-201ENSMUST00000121994 527 ntBASIC5.01□□□□□ -1.61
Col8a1Q00780 Gm14330-201ENSMUST00000155455 455 ntTSL 5 BASIC5.01□□□□□ -1.61
Col8a1Q00780 Gm22214-201ENSMUST00000157563 172 ntBASIC5.01□□□□□ -1.61
Col8a1Q00780 Gm25383-201ENSMUST00000157810 144 ntBASIC5.01□□□□□ -1.61
Col8a1Q00780 Vmn1r-ps51-201ENSMUST00000175667 320 ntBASIC5.01□□□□□ -1.61
Col8a1Q00780 Gm26318-201ENSMUST00000176507 96 ntBASIC5.01□□□□□ -1.61
Col8a1Q00780 Gm498-203ENSMUST00000179036 990 ntTSL 5 BASIC5.01□□□□□ -1.61
Col8a1Q00780 Gm21732-201ENSMUST00000179309 1083 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
Col8a1Q00780 Gm21773-201ENSMUST00000179355 1083 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
Col8a1Q00780 Gm21921-201ENSMUST00000180040 1083 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
Col8a1Q00780 Gm29111-201ENSMUST00000188823 696 ntBASIC5.01□□□□□ -1.61
Col8a1Q00780 Gm28763-201ENSMUST00000188870 166 ntTSL 5 BASIC5.01□□□□□ -1.61
Col8a1Q00780 1700066N21Rik-201ENSMUST00000190123 783 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Col8a1Q00780 Gm29579-201ENSMUST00000190820 166 ntTSL 5 BASIC5.01□□□□□ -1.61
Retrieved 100 of 76,532 protein–RNA pairs in 101.9 ms