Protein–RNA interactions for Protein: P97386

Lig3, DNA ligase 3, mousemouse

Predictions only

Length 1,015 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3P97386 2210414B05Rik-201ENSMUST00000139600 872 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Lig3P97386 Gm23902-201ENSMUST00000157571 134 ntBASIC5.2□□□□□ -1.58
Lig3P97386 Vmn1r-ps22-201ENSMUST00000176017 900 ntBASIC5.2□□□□□ -1.58
Lig3P97386 Mir6414-201ENSMUST00000183685 82 ntBASIC5.2□□□□□ -1.58
Lig3P97386 Gm4707-202ENSMUST00000183937 276 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
Lig3P97386 Gm27568-201ENSMUST00000184220 99 ntBASIC5.2□□□□□ -1.58
Lig3P97386 Obox8-201ENSMUST00000184356 1167 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Lig3P97386 Gm7135-201ENSMUST00000187538 675 ntTSL 3 BASIC5.2□□□□□ -1.58
Lig3P97386 Scgb2b31-ps-201ENSMUST00000188734 328 ntBASIC5.2□□□□□ -1.58
Lig3P97386 Gm29065-201ENSMUST00000188786 487 ntTSL 3 BASIC5.2□□□□□ -1.58
Lig3P97386 Scgb2b32-ps-201ENSMUST00000190326 337 ntBASIC5.2□□□□□ -1.58
Lig3P97386 Gm38283-201ENSMUST00000193041 695 ntBASIC5.2□□□□□ -1.58
Lig3P97386 Ighv3-4-201ENSMUST00000193408 353 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
Lig3P97386 Gm5842-201ENSMUST00000195073 622 ntBASIC5.2□□□□□ -1.58
Lig3P97386 Obox4-ps32-201ENSMUST00000196512 537 ntBASIC5.2□□□□□ -1.58
Lig3P97386 Clec2g-205ENSMUST00000203405 967 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Lig3P97386 Snhg1-205ENSMUST00000205825 495 ntTSL 3 BASIC5.2□□□□□ -1.58
Lig3P97386 Gm38944-201ENSMUST00000208218 512 ntTSL 2 BASIC5.2□□□□□ -1.58
Lig3P97386 AC159819.1-201ENSMUST00000213911 328 ntBASIC5.2□□□□□ -1.58
Lig3P97386 AC164087.1-201ENSMUST00000215174 733 ntTSL 3 BASIC5.2□□□□□ -1.58
Lig3P97386 AC138290.1-201ENSMUST00000219242 820 ntTSL 5 BASIC5.2□□□□□ -1.58
Lig3P97386 Gm36525-201ENSMUST00000222590 638 ntTSL 5 BASIC5.2□□□□□ -1.58
Lig3P97386 AC140368.1-202ENSMUST00000226131 658 ntBASIC5.2□□□□□ -1.58
Lig3P97386 AC080021.1-201ENSMUST00000228104 700 ntBASIC5.2□□□□□ -1.58
Lig3P97386 AC127371.1-201ENSMUST00000228516 312 ntBASIC5.2□□□□□ -1.58
Lig3P97386 Zfp781-201ENSMUST00000076281 732 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Lig3P97386 Zfp874b-201ENSMUST00000019572 3744 ntAPPRIS P1 TSL 3 BASIC5.2□□□□□ -1.58
Lig3P97386 Zfp811-201ENSMUST00000080905 1656 ntTSL 5 BASIC5.2□□□□□ -1.58
Lig3P97386 Rab30-201ENSMUST00000032879 9456 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Lig3P97386 Olfr715b-202ENSMUST00000215713 3879 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Lig3P97386 Dmxl2-202ENSMUST00000118600 9465 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
Lig3P97386 Trpc5os-201ENSMUST00000155206 3585 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Lig3P97386 Gm37053-201ENSMUST00000192399 2087 ntBASIC5.19□□□□□ -1.58
Lig3P97386 Olfr391-ps-201ENSMUST00000214485 2080 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
Lig3P97386 Gm44822-201ENSMUST00000208559 6389 ntBASIC5.19□□□□□ -1.58
Lig3P97386 Gm43313-201ENSMUST00000201398 2235 ntBASIC5.19□□□□□ -1.58
Lig3P97386 Gm18422-202ENSMUST00000203798 2214 ntBASIC5.19□□□□□ -1.58
Lig3P97386 Gm18189-201ENSMUST00000218153 1951 ntBASIC5.19□□□□□ -1.58
Lig3P97386 Vmn1r217-202ENSMUST00000227110 9888 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
Lig3P97386 Cav1-203ENSMUST00000115454 613 ntTSL 2 BASIC5.19□□□□□ -1.58
Lig3P97386 Gm11196-201ENSMUST00000119052 395 ntBASIC5.19□□□□□ -1.58
Lig3P97386 Klra14-ps-201ENSMUST00000119532 802 ntBASIC5.19□□□□□ -1.58
Lig3P97386 Gm23837-201ENSMUST00000122656 286 ntBASIC5.19□□□□□ -1.58
Lig3P97386 Gm14435-202ENSMUST00000127687 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
Lig3P97386 Gm23441-201ENSMUST00000157268 127 ntBASIC5.19□□□□□ -1.58
Lig3P97386 Gm26404-201ENSMUST00000158498 109 ntBASIC5.19□□□□□ -1.58
Lig3P97386 Gm25714-201ENSMUST00000158626 296 ntBASIC5.19□□□□□ -1.58
Lig3P97386 Gm20389-201ENSMUST00000174217 1006 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Lig3P97386 Mir6416-201ENSMUST00000183664 117 ntBASIC5.19□□□□□ -1.58
Lig3P97386 1700031M16Rik-204ENSMUST00000189724 824 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
Lig3P97386 Rps27a-ps1-201ENSMUST00000191424 463 ntBASIC5.19□□□□□ -1.58
Lig3P97386 1700031M16Rik-207ENSMUST00000191513 847 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
Lig3P97386 Gm37228-201ENSMUST00000193574 331 ntTSL 5 BASIC5.19□□□□□ -1.58
Lig3P97386 Gm37359-201ENSMUST00000195243 526 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Lig3P97386 Gm43350-201ENSMUST00000196382 711 ntBASIC5.19□□□□□ -1.58
Lig3P97386 Gm19617-201ENSMUST00000202977 308 ntBASIC5.19□□□□□ -1.58
Lig3P97386 Gm44061-201ENSMUST00000203962 1195 ntBASIC5.19□□□□□ -1.58
Lig3P97386 Olfr574-202ENSMUST00000211329 1039 ntAPPRIS ALT2 BASIC5.19□□□□□ -1.58
Lig3P97386 AC142273.1-201ENSMUST00000213723 673 ntBASIC5.19□□□□□ -1.58
Lig3P97386 Cyp3a61-ps1-201ENSMUST00000218470 592 ntBASIC5.19□□□□□ -1.58
Lig3P97386 AC122301.1-201ENSMUST00000219625 507 ntBASIC5.19□□□□□ -1.58
Lig3P97386 CT485612.3-201ENSMUST00000222179 408 ntBASIC5.19□□□□□ -1.58
Lig3P97386 U90926-201ENSMUST00000031356 520 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
Lig3P97386 Iapp-201ENSMUST00000041993 839 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Lig3P97386 Olfr1020-201ENSMUST00000055840 1079 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
Lig3P97386 Olfr1451-201ENSMUST00000063144 933 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
Lig3P97386 Olfr811-201ENSMUST00000076437 960 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
Lig3P97386 Gm25260-201ENSMUST00000083053 134 ntBASIC5.19□□□□□ -1.58
Lig3P97386 Mir199a-2-201ENSMUST00000093618 110 ntBASIC5.19□□□□□ -1.58
Lig3P97386 Gm904-201ENSMUST00000099519 649 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Lig3P97386 Hormad1-204ENSMUST00000171191 1437 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
Lig3P97386 Ccnb3-202ENSMUST00000115752 4554 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Lig3P97386 Gm45235-201ENSMUST00000208016 4465 ntBASIC5.19□□□□□ -1.58
Lig3P97386 Brcc3-202ENSMUST00000114074 2473 ntAPPRIS P2 TSL 1 (best) BASIC5.19□□□□□ -1.58
Lig3P97386 Postn-204ENSMUST00000117373 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
Lig3P97386 Gm43654-201ENSMUST00000200664 3417 ntBASIC5.19□□□□□ -1.58
Lig3P97386 Ago2-201ENSMUST00000044113 13705 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Lig3P97386 Gm36931-201ENSMUST00000192997 4801 ntBASIC5.18□□□□□ -1.58
Lig3P97386 Zfp322a-201ENSMUST00000050101 4844 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Lig3P97386 Scaper-205ENSMUST00000217647 4370 ntAPPRIS P2 TSL 5 BASIC5.18□□□□□ -1.58
Lig3P97386 Vmn2r110-201ENSMUST00000169559 2577 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Lig3P97386 Nxt2-201ENSMUST00000042329 2447 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
Lig3P97386 Gm43319-201ENSMUST00000198036 2270 ntBASIC5.18□□□□□ -1.58
Lig3P97386 Phyhipl-206ENSMUST00000162251 1540 ntTSL 3 BASIC5.18□□□□□ -1.58
Lig3P97386 Gm37965-201ENSMUST00000195304 1362 ntBASIC5.18□□□□□ -1.58
Lig3P97386 Cyp3a11-201ENSMUST00000035918 2344 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Lig3P97386 AC170999.1-201ENSMUST00000226359 1585 ntBASIC5.18□□□□□ -1.58
Lig3P97386 Gm2099-202ENSMUST00000223310 3341 ntBASIC5.18□□□□□ -1.58
Lig3P97386 Vmn1r43-204ENSMUST00000226983 12805 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
Lig3P97386 Gm8674-201ENSMUST00000179367 3047 ntBASIC5.18□□□□□ -1.58
Lig3P97386 Mir706-201ENSMUST00000102262 84 ntBASIC5.18□□□□□ -1.58
Lig3P97386 Igkv1-132-201ENSMUST00000103305 362 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
Lig3P97386 Gm14995-201ENSMUST00000117135 391 ntBASIC5.18□□□□□ -1.58
Lig3P97386 Gm14753-201ENSMUST00000118503 246 ntBASIC5.18□□□□□ -1.58
Lig3P97386 Gm12007-201ENSMUST00000120978 597 ntBASIC5.18□□□□□ -1.58
Lig3P97386 Vmn2r-ps2-201ENSMUST00000121053 765 ntBASIC5.18□□□□□ -1.58
Lig3P97386 Gm13808-201ENSMUST00000121353 184 ntBASIC5.18□□□□□ -1.58
Lig3P97386 Gm15245-201ENSMUST00000129410 1186 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Lig3P97386 4930517O19Rik-202ENSMUST00000145018 571 ntTSL 3 BASIC5.18□□□□□ -1.58
Lig3P97386 4930505K14Rik-201ENSMUST00000155504 515 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 109.6 ms