Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 Olfr235-205ENSMUST00000214638 3459 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
Cux1P53564 Gm8297-202ENSMUST00000171964 1759 ntAPPRIS P5 TSL 5 BASIC6.58□□□□□ -1.36
Cux1P53564 Nxt2-202ENSMUST00000112913 2538 ntTSL 3 BASIC6.58□□□□□ -1.36
Cux1P53564 Vmn1r22-202ENSMUST00000227650 3674 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
Cux1P53564 Gm45517-201ENSMUST00000209973 2468 ntBASIC6.58□□□□□ -1.36
Cux1P53564 4930503E14Rik-201ENSMUST00000100688 1287 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Cux1P53564 Casp8ap2-202ENSMUST00000108178 1189 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
Cux1P53564 Mup-ps17-201ENSMUST00000120723 218 ntBASIC6.58□□□□□ -1.36
Cux1P53564 Gm24505-201ENSMUST00000157682 126 ntBASIC6.58□□□□□ -1.36
Cux1P53564 Gm22156-201ENSMUST00000158409 141 ntBASIC6.58□□□□□ -1.36
Cux1P53564 2610001A08Rik-201ENSMUST00000193315 867 ntBASIC6.58□□□□□ -1.36
Cux1P53564 1700126H18Rik-201ENSMUST00000201903 405 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Cux1P53564 Gm44174-201ENSMUST00000205022 141 ntTSL 2 BASIC6.58□□□□□ -1.36
Cux1P53564 Gm44871-201ENSMUST00000207821 497 ntBASIC6.58□□□□□ -1.36
Cux1P53564 Gm21320-201ENSMUST00000211875 861 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Cux1P53564 Olfr724-202ENSMUST00000213390 1152 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
Cux1P53564 AC154368.1-201ENSMUST00000223465 205 ntTSL 5 BASIC6.58□□□□□ -1.36
Cux1P53564 Gm25481-201ENSMUST00000083221 158 ntBASIC6.58□□□□□ -1.36
Cux1P53564 Zfp131-202ENSMUST00000178271 2966 ntAPPRIS P3 TSL 1 (best) BASIC6.58□□□□□ -1.36
Cux1P53564 Vmn1r71-202ENSMUST00000226874 5194 ntAPPRIS P2 BASIC6.58□□□□□ -1.36
Cux1P53564 Sult1c2-201ENSMUST00000023886 1846 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Cux1P53564 Gm16794-201ENSMUST00000180727 2100 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Cux1P53564 Foxp2-203ENSMUST00000115470 2692 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Cux1P53564 Vmn1r193-204ENSMUST00000228303 6653 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
Cux1P53564 Gm45235-201ENSMUST00000208016 4465 ntBASIC6.57□□□□□ -1.36
Cux1P53564 Epha3-201ENSMUST00000064405 5659 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Cux1P53564 Gm29260-201ENSMUST00000186391 2759 ntTSL 3 BASIC6.57□□□□□ -1.36
Cux1P53564 Cul4b-203ENSMUST00000115118 3344 ntAPPRIS P2 TSL 1 (best) BASIC6.57□□□□□ -1.36
Cux1P53564 Gm11781-201ENSMUST00000118328 472 ntBASIC6.57□□□□□ -1.36
Cux1P53564 Gm3160-201ENSMUST00000128343 607 ntBASIC6.57□□□□□ -1.36
Cux1P53564 Gm16290-201ENSMUST00000161175 474 ntBASIC6.57□□□□□ -1.36
Cux1P53564 Gm27033-201ENSMUST00000183226 544 ntBASIC6.57□□□□□ -1.36
Cux1P53564 Gm37164-201ENSMUST00000192809 637 ntBASIC6.57□□□□□ -1.36
Cux1P53564 Gm43304-201ENSMUST00000196803 326 ntBASIC6.57□□□□□ -1.36
Cux1P53564 Gm7468-201ENSMUST00000203900 652 ntBASIC6.57□□□□□ -1.36
Cux1P53564 AL590503.1-201ENSMUST00000222053 321 ntBASIC6.57□□□□□ -1.36
Cux1P53564 Gm21854-202ENSMUST00000190391 1480 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
Cux1P53564 Olfr1191-ps1-201ENSMUST00000120598 4677 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
Cux1P53564 AC154573.1-201ENSMUST00000225913 4659 ntBASIC6.57□□□□□ -1.36
Cux1P53564 Kcnj1-202ENSMUST00000172015 3075 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Cux1P53564 Olfr1341-203ENSMUST00000215117 4700 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
Cux1P53564 Gm43605-201ENSMUST00000199663 3426 ntBASIC6.56□□□□□ -1.36
Cux1P53564 Zfp715-202ENSMUST00000048015 4333 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Cux1P53564 Nectin3-204ENSMUST00000119941 529 ntTSL 3 BASIC6.56□□□□□ -1.36
Cux1P53564 Gm11398-201ENSMUST00000120330 320 ntBASIC6.56□□□□□ -1.36
Cux1P53564 Gm23782-201ENSMUST00000157939 120 ntBASIC6.56□□□□□ -1.36
Cux1P53564 Gm27457-201ENSMUST00000184771 156 ntBASIC6.56□□□□□ -1.36
Cux1P53564 Gm37603-201ENSMUST00000192368 219 ntBASIC6.56□□□□□ -1.36
Cux1P53564 Gm43774-201ENSMUST00000196327 878 ntBASIC6.56□□□□□ -1.36
Cux1P53564 AC153794.2-201ENSMUST00000222650 550 ntBASIC6.56□□□□□ -1.36
Cux1P53564 AC154358.1-201ENSMUST00000224871 218 ntBASIC6.56□□□□□ -1.36
Cux1P53564 Olfr502-201ENSMUST00000078933 1059 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
Cux1P53564 Gm25134-201ENSMUST00000082646 160 ntBASIC6.56□□□□□ -1.36
Cux1P53564 Gm3972-201ENSMUST00000173960 2861 ntBASIC6.56□□□□□ -1.36
Cux1P53564 Fam126b-207ENSMUST00000161600 8685 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Cux1P53564 Gm45061-201ENSMUST00000204395 2095 ntBASIC6.56□□□□□ -1.36
Cux1P53564 Tbl1xr1-202ENSMUST00000192328 3323 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Cux1P53564 Zscan4-ps1-201ENSMUST00000165848 2015 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
Cux1P53564 Cyp39a1-201ENSMUST00000170988 3053 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Cux1P53564 Olfr270-201ENSMUST00000095084 2204 ntAPPRIS ALT1 TSL 5 BASIC6.56□□□□□ -1.36
Cux1P53564 Ms4a7-201ENSMUST00000025574 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
Cux1P53564 Ahnak-202ENSMUST00000092956 18099 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
Cux1P53564 Gm28465-202ENSMUST00000220779 1701 ntTSL 5 BASIC6.56□□□□□ -1.36
Cux1P53564 Gm14365-201ENSMUST00000117535 587 ntBASIC6.55□□□□□ -1.36
Cux1P53564 Gm15313-201ENSMUST00000119179 282 ntBASIC6.55□□□□□ -1.36
Cux1P53564 AI847159-202ENSMUST00000138431 952 ntTSL 2 BASIC6.55□□□□□ -1.36
Cux1P53564 Gm17416-201ENSMUST00000163724 201 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
Cux1P53564 Gm21045-201ENSMUST00000183058 1020 ntBASIC6.55□□□□□ -1.36
Cux1P53564 Mir7669-201ENSMUST00000183442 58 ntBASIC6.55□□□□□ -1.36
Cux1P53564 Trdv1-202ENSMUST00000187163 334 ntAPPRIS ALT2 BASIC6.55□□□□□ -1.36
Cux1P53564 2010005H15Rik-202ENSMUST00000187183 639 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Cux1P53564 Gm44839-201ENSMUST00000206590 241 ntTSL 5 BASIC6.55□□□□□ -1.36
Cux1P53564 AC153852.1-201ENSMUST00000217881 567 ntBASIC6.55□□□□□ -1.36
Cux1P53564 Rpl32-ps-201ENSMUST00000091052 506 ntBASIC6.55□□□□□ -1.36
Cux1P53564 Olfr1249-201ENSMUST00000099769 957 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
Cux1P53564 Gm16185-201ENSMUST00000125071 3207 ntTSL 5 BASIC6.55□□□□□ -1.36
Cux1P53564 Olfr947-ps1-201ENSMUST00000214075 2165 ntAPPRIS P1 TSL 3 BASIC6.55□□□□□ -1.36
Cux1P53564 Gm44587-201ENSMUST00000207399 1685 ntBASIC6.55□□□□□ -1.36
Cux1P53564 9430018G01Rik-201ENSMUST00000203260 3758 ntTSL 5 BASIC6.55□□□□□ -1.36
Cux1P53564 Vmn2r6-201ENSMUST00000165012 2484 ntAPPRIS P2 TSL 5 BASIC6.55□□□□□ -1.36
Cux1P53564 Vmn2r7-203ENSMUST00000168072 2484 ntAPPRIS P2 TSL 5 BASIC6.55□□□□□ -1.36
Cux1P53564 Gm24281-201ENSMUST00000104234 136 ntBASIC6.55□□□□□ -1.36
Cux1P53564 Fam122c-201ENSMUST00000114835 745 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Cux1P53564 Gm12693-201ENSMUST00000121965 483 ntBASIC6.55□□□□□ -1.36
Cux1P53564 Gm26005-201ENSMUST00000158802 134 ntBASIC6.55□□□□□ -1.36
Cux1P53564 Gm22398-201ENSMUST00000174941 125 ntBASIC6.55□□□□□ -1.36
Cux1P53564 Gm25731-201ENSMUST00000175167 125 ntBASIC6.55□□□□□ -1.36
Cux1P53564 Gm14419-204ENSMUST00000178182 192 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Cux1P53564 Gm2004-202ENSMUST00000178872 192 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Cux1P53564 Gm14295-203ENSMUST00000179435 192 ntTSL 5 BASIC6.55□□□□□ -1.36
Cux1P53564 Nabp1-207ENSMUST00000188204 972 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Cux1P53564 Gm36259-201ENSMUST00000197340 392 ntBASIC6.55□□□□□ -1.36
Cux1P53564 Fbxw15-203ENSMUST00000198397 927 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
Cux1P53564 AC166263.1-201ENSMUST00000218586 238 ntBASIC6.55□□□□□ -1.36
Cux1P53564 AC159244.1-201ENSMUST00000220964 594 ntBASIC6.55□□□□□ -1.36
Cux1P53564 Gm12888-201ENSMUST00000097905 1181 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Cux1P53564 Vmn1r52-207ENSMUST00000228394 3069 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Cux1P53564 Nlrp4e-201ENSMUST00000076470 3382 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Cux1P53564 Ank2-207ENSMUST00000182064 12413 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
Cux1P53564 Olfr461-202ENSMUST00000215009 4292 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 72.5 ms