Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Prrc2c-210ENSMUST00000182660 11502 ntAPPRIS P2 TSL 5 BASIC4.25□□□□□ -1.73
Cdx2P43241 Sult6b1-204ENSMUST00000169544 2060 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
Cdx2P43241 Cd226-201ENSMUST00000037142 2357 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
Cdx2P43241 Ndst4-205ENSMUST00000174648 4996 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Cdx2P43241 Acsm3-205ENSMUST00000106529 3295 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Cdx2P43241 Igkv8-19-201ENSMUST00000103389 305 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
Cdx2P43241 Olfr1292-ps1-201ENSMUST00000118137 939 ntBASIC4.25□□□□□ -1.73
Cdx2P43241 Gm12719-201ENSMUST00000118859 241 ntBASIC4.25□□□□□ -1.73
Cdx2P43241 Gm9208-201ENSMUST00000120468 948 ntBASIC4.25□□□□□ -1.73
Cdx2P43241 Gm12755-201ENSMUST00000122297 282 ntBASIC4.25□□□□□ -1.73
Cdx2P43241 Gm22986-201ENSMUST00000122753 130 ntBASIC4.25□□□□□ -1.73
Cdx2P43241 Gm15533-201ENSMUST00000126205 465 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Cdx2P43241 Gm22588-201ENSMUST00000157510 140 ntBASIC4.25□□□□□ -1.73
Cdx2P43241 Gm22501-201ENSMUST00000158981 127 ntBASIC4.25□□□□□ -1.73
Cdx2P43241 Gm17191-201ENSMUST00000165200 417 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Cdx2P43241 Il3-201ENSMUST00000019058 629 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
Cdx2P43241 Gm38201-201ENSMUST00000192143 387 ntBASIC4.25□□□□□ -1.73
Cdx2P43241 Gm37505-201ENSMUST00000195670 461 ntTSL 5 BASIC4.25□□□□□ -1.73
Cdx2P43241 6030400A10Rik-201ENSMUST00000199734 1212 ntBASIC4.25□□□□□ -1.73
Cdx2P43241 Gm44002-201ENSMUST00000205134 594 ntBASIC4.25□□□□□ -1.73
Cdx2P43241 Gm8319-201ENSMUST00000205708 641 ntBASIC4.25□□□□□ -1.73
Cdx2P43241 AC127581.1-201ENSMUST00000214084 771 ntTSL 5 BASIC4.25□□□□□ -1.73
Cdx2P43241 AC154738.5-201ENSMUST00000227397 310 ntBASIC4.25□□□□□ -1.73
Cdx2P43241 Gm7257-201ENSMUST00000041537 519 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
Cdx2P43241 Gm5548-201ENSMUST00000055878 397 ntBASIC4.25□□□□□ -1.73
Cdx2P43241 Olfr986-201ENSMUST00000062229 1016 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
Cdx2P43241 Olfr682-ps1-201ENSMUST00000071242 934 ntBASIC4.25□□□□□ -1.73
Cdx2P43241 Vmn1r215-201ENSMUST00000072972 1048 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
Cdx2P43241 Olfr168-201ENSMUST00000078554 939 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
Cdx2P43241 Olfr629-203ENSMUST00000216300 2277 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
Cdx2P43241 Cnot6l-210ENSMUST00000155901 8564 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
Cdx2P43241 Gm32444-201ENSMUST00000195147 3511 ntBASIC4.25□□□□□ -1.73
Cdx2P43241 Olfr270-201ENSMUST00000095084 2204 ntAPPRIS ALT1 TSL 5 BASIC4.25□□□□□ -1.73
Cdx2P43241 Trim30a-201ENSMUST00000076922 3771 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
Cdx2P43241 Abi3bp-203ENSMUST00000096013 4495 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
Cdx2P43241 A630033H20Rik-201ENSMUST00000067249 3004 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Cdx2P43241 Zfp967-202ENSMUST00000178443 1458 ntAPPRIS P1 TSL 2 BASIC4.24□□□□□ -1.73
Cdx2P43241 Zfp969-203ENSMUST00000179061 1458 ntAPPRIS P1 TSL 3 BASIC4.24□□□□□ -1.73
Cdx2P43241 Olfr187-202ENSMUST00000207673 1322 ntAPPRIS P1 TSL 2 BASIC4.24□□□□□ -1.73
Cdx2P43241 Akr1c14-201ENSMUST00000041768 2436 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Cdx2P43241 Olfr1217-203ENSMUST00000214022 3947 ntAPPRIS P1 TSL 3 BASIC4.24□□□□□ -1.73
Cdx2P43241 Olfr876-203ENSMUST00000215287 4474 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
Cdx2P43241 Gm3985-201ENSMUST00000132101 2515 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
Cdx2P43241 Gm29325-201ENSMUST00000190705 2528 ntBASIC4.24□□□□□ -1.73
Cdx2P43241 Gm38106-201ENSMUST00000194107 2534 ntBASIC4.24□□□□□ -1.73
Cdx2P43241 Btbd35f17-201ENSMUST00000105014 1960 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
Cdx2P43241 Btbd35f28-201ENSMUST00000105015 1960 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
Cdx2P43241 Btbd35f18-201ENSMUST00000105019 1960 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
Cdx2P43241 Btbd35f11-201ENSMUST00000105020 1960 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
Cdx2P43241 Trim30b-205ENSMUST00000171830 2771 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
Cdx2P43241 Hdx-202ENSMUST00000113422 9534 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Cdx2P43241 Gm5591-201ENSMUST00000079759 3441 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Cdx2P43241 Gm24544-201ENSMUST00000103862 110 ntBASIC4.24□□□□□ -1.73
Cdx2P43241 Gm15076-201ENSMUST00000117076 474 ntBASIC4.24□□□□□ -1.73
Cdx2P43241 Gm12245-201ENSMUST00000117266 357 ntBASIC4.24□□□□□ -1.73
Cdx2P43241 Gm15185-201ENSMUST00000117397 746 ntBASIC4.24□□□□□ -1.73
Cdx2P43241 Gm5757-201ENSMUST00000117494 528 ntBASIC4.24□□□□□ -1.73
Cdx2P43241 Gm16420-201ENSMUST00000120258 856 ntBASIC4.24□□□□□ -1.73
Cdx2P43241 Gm6031-201ENSMUST00000121314 1054 ntBASIC4.24□□□□□ -1.73
Cdx2P43241 Gm14587-201ENSMUST00000121714 658 ntBASIC4.24□□□□□ -1.73
Cdx2P43241 Gm14916-201ENSMUST00000121904 204 ntBASIC4.24□□□□□ -1.73
Cdx2P43241 Gm17546-201ENSMUST00000168960 733 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
Cdx2P43241 Gm6214-201ENSMUST00000178845 541 ntBASIC4.24□□□□□ -1.73
Cdx2P43241 Gm28389-201ENSMUST00000190090 697 ntBASIC4.24□□□□□ -1.73
Cdx2P43241 Gm29527-201ENSMUST00000190722 622 ntTSL 5 BASIC4.24□□□□□ -1.73
Cdx2P43241 Gm8790-201ENSMUST00000194108 322 ntBASIC4.24□□□□□ -1.73
Cdx2P43241 Gm44354-201ENSMUST00000196017 143 ntBASIC4.24□□□□□ -1.73
Cdx2P43241 Zfp950-210ENSMUST00000205854 466 ntTSL 3 BASIC4.24□□□□□ -1.73
Cdx2P43241 AC131747.1-201ENSMUST00000226159 793 ntBASIC4.24□□□□□ -1.73
Cdx2P43241 Pate4-201ENSMUST00000034610 1072 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Cdx2P43241 Olfr664-201ENSMUST00000072887 966 ntAPPRIS P5 BASIC4.24□□□□□ -1.73
Cdx2P43241 Zfp300-201ENSMUST00000040667 4634 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Cdx2P43241 Smgc-201ENSMUST00000088555 2977 ntAPPRIS P2 TSL 1 (best) BASIC4.24□□□□□ -1.73
Cdx2P43241 Gm9597-202ENSMUST00000227632 1387 ntBASIC4.24□□□□□ -1.73
Cdx2P43241 Gm42494-201ENSMUST00000196515 3051 ntBASIC4.24□□□□□ -1.73
Cdx2P43241 Olfr639-202ENSMUST00000215653 6570 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
Cdx2P43241 Gm20449-201ENSMUST00000094532 3847 ntAPPRIS P1 TSL 2 BASIC4.24□□□□□ -1.73
Cdx2P43241 Gm15624-203ENSMUST00000204811 3402 ntBASIC4.24□□□□□ -1.73
Cdx2P43241 AC133076.2-201ENSMUST00000227678 3532 ntBASIC4.24□□□□□ -1.73
Cdx2P43241 Vmn1r52-202ENSMUST00000226520 3125 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
Cdx2P43241 Olfr414-202ENSMUST00000192358 4526 ntAPPRIS P1 TSL 2 BASIC4.23□□□□□ -1.73
Cdx2P43241 Gm18422-202ENSMUST00000203798 2214 ntBASIC4.23□□□□□ -1.73
Cdx2P43241 Vmn2r77-201ENSMUST00000164996 2565 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Cdx2P43241 Olfr676-204ENSMUST00000219602 2802 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Cdx2P43241 Olfr372-202ENSMUST00000215324 3542 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Cdx2P43241 Zfp950-204ENSMUST00000143264 4825 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
Cdx2P43241 Ighv5-16-201ENSMUST00000103458 350 ntAPPRIS ALT2 BASIC4.23□□□□□ -1.73
Cdx2P43241 Casp8ap2-202ENSMUST00000108178 1189 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
Cdx2P43241 Gm15038-201ENSMUST00000122144 296 ntBASIC4.23□□□□□ -1.73
Cdx2P43241 Gm14902-201ENSMUST00000145576 1007 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
Cdx2P43241 Gm25714-201ENSMUST00000158626 296 ntBASIC4.23□□□□□ -1.73
Cdx2P43241 Snrpe-201ENSMUST00000164096 669 ntTSL 2 BASIC4.23□□□□□ -1.73
Cdx2P43241 Gm25999-201ENSMUST00000175398 133 ntBASIC4.23□□□□□ -1.73
Cdx2P43241 Gm28709-201ENSMUST00000186967 456 ntTSL 5 BASIC4.23□□□□□ -1.73
Cdx2P43241 Gm8498-201ENSMUST00000188227 974 ntBASIC4.23□□□□□ -1.73
Cdx2P43241 Gm28612-201ENSMUST00000189214 416 ntTSL 5 BASIC4.23□□□□□ -1.73
Cdx2P43241 Gm2447-201ENSMUST00000191954 544 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
Cdx2P43241 Gm43405-201ENSMUST00000198642 337 ntBASIC4.23□□□□□ -1.73
Cdx2P43241 Gm43001-202ENSMUST00000199076 192 ntTSL 3 BASIC4.23□□□□□ -1.73
Cdx2P43241 Arl8b-202ENSMUST00000204483 695 ntTSL 3 BASIC4.23□□□□□ -1.73
Retrieved 100 of 76,532 protein–RNA pairs in 99.4 ms