Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Gm13491-201ENSMUST00000118267 235 ntBASIC5.49□□□□□ -1.53
Traf1P39428 Gm15012-201ENSMUST00000119176 106 ntBASIC5.49□□□□□ -1.53
Traf1P39428 Gm14991-201ENSMUST00000119913 598 ntBASIC5.49□□□□□ -1.53
Traf1P39428 2610024D14Rik-201ENSMUST00000121233 294 ntBASIC5.49□□□□□ -1.53
Traf1P39428 Gm15057-201ENSMUST00000121516 534 ntBASIC5.49□□□□□ -1.53
Traf1P39428 Gm13220-201ENSMUST00000121535 508 ntBASIC5.49□□□□□ -1.53
Traf1P39428 Gm16019-201ENSMUST00000149538 261 ntTSL 5 BASIC5.49□□□□□ -1.53
Traf1P39428 Gm25665-201ENSMUST00000157695 110 ntBASIC5.49□□□□□ -1.53
Traf1P39428 Gm25839-201ENSMUST00000158921 103 ntBASIC5.49□□□□□ -1.53
Traf1P39428 4930519F16Rik-206ENSMUST00000183292 800 ntBASIC5.49□□□□□ -1.53
Traf1P39428 Gm6051-201ENSMUST00000201529 352 ntBASIC5.49□□□□□ -1.53
Traf1P39428 Gm44079-201ENSMUST00000204889 529 ntTSL 5 BASIC5.49□□□□□ -1.53
Traf1P39428 Olfr793-ps1-201ENSMUST00000205161 895 ntBASIC5.49□□□□□ -1.53
Traf1P39428 Ankrd42-207ENSMUST00000207131 1220 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Traf1P39428 Gm44919-201ENSMUST00000208587 1073 ntBASIC5.49□□□□□ -1.53
Traf1P39428 Gm45710-201ENSMUST00000212847 215 ntBASIC5.49□□□□□ -1.53
Traf1P39428 AC154313.1-201ENSMUST00000217755 3841 ntBASIC5.49□□□□□ -1.53
Traf1P39428 Olfr1291-ps1-202ENSMUST00000219064 897 ntBASIC5.49□□□□□ -1.53
Traf1P39428 Olfr202-201ENSMUST00000049859 924 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
Traf1P39428 Olfr1472-201ENSMUST00000077501 945 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
Traf1P39428 Olfr493-201ENSMUST00000080106 945 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
Traf1P39428 Rpl21-ps4-201ENSMUST00000080237 438 ntBASIC5.49□□□□□ -1.53
Traf1P39428 Olfr1475-201ENSMUST00000080801 945 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
Traf1P39428 Gm22005-201ENSMUST00000082795 141 ntBASIC5.49□□□□□ -1.53
Traf1P39428 Mir338-201ENSMUST00000083666 98 ntBASIC5.49□□□□□ -1.53
Traf1P39428 n-R5s152-201ENSMUST00000093641 119 ntBASIC5.49□□□□□ -1.53
Traf1P39428 Olfr1218-201ENSMUST00000099798 936 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
Traf1P39428 Klri2-201ENSMUST00000050385 3913 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Traf1P39428 Vmn1r41-201ENSMUST00000204949 1378 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
Traf1P39428 Olfr726-206ENSMUST00000217025 1363 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
Traf1P39428 Olfr1382-202ENSMUST00000213152 4236 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
Traf1P39428 Gm44433-201ENSMUST00000203540 4832 ntBASIC5.49□□□□□ -1.53
Traf1P39428 Olfr695-201ENSMUST00000216868 3953 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
Traf1P39428 Vmn1r6-205ENSMUST00000227631 7805 ntAPPRIS ALT2 BASIC5.49□□□□□ -1.53
Traf1P39428 Gm13477-201ENSMUST00000121620 2687 ntBASIC5.49□□□□□ -1.53
Traf1P39428 Cnot1-201ENSMUST00000068452 8152 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Traf1P39428 Vsig4-201ENSMUST00000050707 1432 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Traf1P39428 Spp1-204ENSMUST00000112747 1507 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
Traf1P39428 Ceacam2-201ENSMUST00000044547 2844 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
Traf1P39428 Slco1b2-201ENSMUST00000042812 3307 ntAPPRIS P2 TSL 1 (best) BASIC5.48□□□□□ -1.53
Traf1P39428 AC122382.2-201ENSMUST00000225128 3602 ntBASIC5.48□□□□□ -1.53
Traf1P39428 Slco1a1-201ENSMUST00000042119 3395 ntAPPRIS P2 TSL 1 (best) BASIC5.48□□□□□ -1.53
Traf1P39428 Olfr59-201ENSMUST00000143976 3088 ntAPPRIS P1 TSL 3 BASIC5.48□□□□□ -1.53
Traf1P39428 Gm44587-201ENSMUST00000207399 1685 ntBASIC5.48□□□□□ -1.53
Traf1P39428 Csn3-203ENSMUST00000113271 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Traf1P39428 Gm24124-201ENSMUST00000104103 132 ntBASIC5.48□□□□□ -1.53
Traf1P39428 Gm24855-201ENSMUST00000104848 97 ntBASIC5.48□□□□□ -1.53
Traf1P39428 4930444P10Rik-201ENSMUST00000115367 868 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
Traf1P39428 Gm14706-201ENSMUST00000117744 255 ntBASIC5.48□□□□□ -1.53
Traf1P39428 Rps12-ps26-201ENSMUST00000117751 333 ntBASIC5.48□□□□□ -1.53
Traf1P39428 Gm13932-201ENSMUST00000120873 610 ntBASIC5.48□□□□□ -1.53
Traf1P39428 Pdcl2-202ENSMUST00000122213 1049 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Traf1P39428 Gm13546-201ENSMUST00000135735 401 ntTSL 5 BASIC5.48□□□□□ -1.53
Traf1P39428 Mllt3-207ENSMUST00000148059 422 ntTSL 5 BASIC5.48□□□□□ -1.53
Traf1P39428 Gm24774-201ENSMUST00000157384 134 ntBASIC5.48□□□□□ -1.53
Traf1P39428 Gm16285-201ENSMUST00000162999 347 ntBASIC5.48□□□□□ -1.53
Traf1P39428 Gm4134-201ENSMUST00000173244 563 ntBASIC5.48□□□□□ -1.53
Traf1P39428 A630095N17Rik-202ENSMUST00000180101 571 ntAPPRIS P4 TSL 3 BASIC5.48□□□□□ -1.53
Traf1P39428 Gm26871-204ENSMUST00000181310 523 ntTSL 3 BASIC5.48□□□□□ -1.53
Traf1P39428 Gm4842-201ENSMUST00000183237 835 ntBASIC5.48□□□□□ -1.53
Traf1P39428 Gm27016-201ENSMUST00000183294 715 ntTSL 5 BASIC5.48□□□□□ -1.53
Traf1P39428 Gm27976-201ENSMUST00000183635 162 ntBASIC5.48□□□□□ -1.53
Traf1P39428 Gm27690-201ENSMUST00000184596 126 ntBASIC5.48□□□□□ -1.53
Traf1P39428 Gm37670-201ENSMUST00000193622 229 ntBASIC5.48□□□□□ -1.53
Traf1P39428 Gm37209-201ENSMUST00000194109 1276 ntBASIC5.48□□□□□ -1.53
Traf1P39428 Kcnmb2-206ENSMUST00000194796 338 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Traf1P39428 Gm43020-201ENSMUST00000197178 372 ntTSL 3 BASIC5.48□□□□□ -1.53
Traf1P39428 Gm44376-201ENSMUST00000197570 128 ntBASIC5.48□□□□□ -1.53
Traf1P39428 Ociad2-206ENSMUST00000202012 876 ntTSL 5 BASIC5.48□□□□□ -1.53
Traf1P39428 Gm40293-201ENSMUST00000202596 485 ntTSL 3 BASIC5.48□□□□□ -1.53
Traf1P39428 Gm45007-201ENSMUST00000206237 366 ntBASIC5.48□□□□□ -1.53
Traf1P39428 Gm45052-201ENSMUST00000206457 405 ntTSL 2 BASIC5.48□□□□□ -1.53
Traf1P39428 Gm36371-201ENSMUST00000209043 1103 ntBASIC5.48□□□□□ -1.53
Traf1P39428 Sult2a7-202ENSMUST00000209744 792 ntTSL 5 BASIC5.48□□□□□ -1.53
Traf1P39428 Gm6980-201ENSMUST00000214327 1003 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Traf1P39428 CT486006.1-201ENSMUST00000216797 227 ntTSL 5 BASIC5.48□□□□□ -1.53
Traf1P39428 AC159263.3-201ENSMUST00000223434 460 ntBASIC5.48□□□□□ -1.53
Traf1P39428 AC139758.1-201ENSMUST00000226573 930 ntBASIC5.48□□□□□ -1.53
Traf1P39428 Pglyrp3-201ENSMUST00000047660 1107 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Traf1P39428 Olfr1018-201ENSMUST00000054201 936 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
Traf1P39428 Olfr123-201ENSMUST00000054748 930 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
Traf1P39428 Gm14399-201ENSMUST00000099029 192 ntTSL 5 BASIC5.48□□□□□ -1.53
Traf1P39428 Zfp287-201ENSMUST00000005399 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
Traf1P39428 AC162938.2-205ENSMUST00000217551 2828 ntBASIC5.48□□□□□ -1.53
Traf1P39428 Ralgapa1-211ENSMUST00000220367 7473 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
Traf1P39428 Olfr699-202ENSMUST00000215952 3669 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
Traf1P39428 Cnot6l-202ENSMUST00000113005 3170 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
Traf1P39428 B230206I08Rik-201ENSMUST00000207479 3191 ntBASIC5.48□□□□□ -1.53
Traf1P39428 Gm4166-201ENSMUST00000220893 2996 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Traf1P39428 2210408I21Rik-201ENSMUST00000168779 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Traf1P39428 Akap6-201ENSMUST00000095737 14847 ntAPPRIS P2 TSL 1 (best) BASIC5.48□□□□□ -1.53
Traf1P39428 Abcg2-201ENSMUST00000031822 5717 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Traf1P39428 Gm45697-201ENSMUST00000212893 2876 ntBASIC5.47□□□□□ -1.53
Traf1P39428 Olfr18-203ENSMUST00000212943 2896 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
Traf1P39428 Olfr1300-ps1-201ENSMUST00000208175 2235 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Traf1P39428 Olfr1131-203ENSMUST00000216756 1459 ntTSL 3 BASIC5.47□□□□□ -1.53
Traf1P39428 Angptl3-201ENSMUST00000030280 1482 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Traf1P39428 Vmn1r200-202ENSMUST00000226157 5505 ntAPPRIS P2 BASIC5.47□□□□□ -1.53
Traf1P39428 Vmn1r5-202ENSMUST00000226130 3393 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
Traf1P39428 Gm22657-201ENSMUST00000104197 132 ntBASIC5.47□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 90.4 ms