Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Scgb2b17-203ENSMUST00000182673 434 ntAPPRIS P2 TSL 2 BASIC3.53□□□□□ -1.84
Hmgb3O54879 Scgb2b15-201ENSMUST00000182975 434 ntAPPRIS P1 TSL 2 BASIC3.53□□□□□ -1.84
Hmgb3O54879 Rian-217ENSMUST00000183266 687 ntTSL 3 BASIC3.53□□□□□ -1.84
Hmgb3O54879 4930548G14Rik-202ENSMUST00000190364 1185 ntTSL 2 BASIC3.53□□□□□ -1.84
Hmgb3O54879 Gm44474-201ENSMUST00000196525 127 ntBASIC3.53□□□□□ -1.84
Hmgb3O54879 Gm42437-201ENSMUST00000197263 923 ntBASIC3.53□□□□□ -1.84
Hmgb3O54879 Gm43895-201ENSMUST00000203219 855 ntBASIC3.53□□□□□ -1.84
Hmgb3O54879 Gm44237-201ENSMUST00000205183 936 ntBASIC3.53□□□□□ -1.84
Hmgb3O54879 B130024G19Rik-205ENSMUST00000207952 485 ntTSL 3 BASIC3.53□□□□□ -1.84
Hmgb3O54879 Gm45485-201ENSMUST00000211229 357 ntBASIC3.53□□□□□ -1.84
Hmgb3O54879 Olfr864-ps1-201ENSMUST00000212664 930 ntBASIC3.53□□□□□ -1.84
Hmgb3O54879 Gm18904-201ENSMUST00000218756 329 ntBASIC3.53□□□□□ -1.84
Hmgb3O54879 AC154635.1-201ENSMUST00000221433 400 ntTSL 3 BASIC3.53□□□□□ -1.84
Hmgb3O54879 Gm40658-202ENSMUST00000221900 701 ntTSL 5 BASIC3.53□□□□□ -1.84
Hmgb3O54879 AC174797.2-203ENSMUST00000224017 716 ntBASIC3.53□□□□□ -1.84
Hmgb3O54879 AC125399.1-201ENSMUST00000224236 595 ntBASIC3.53□□□□□ -1.84
Hmgb3O54879 AC139750.2-201ENSMUST00000224424 386 ntBASIC3.53□□□□□ -1.84
Hmgb3O54879 AC164437.2-201ENSMUST00000228915 797 ntBASIC3.53□□□□□ -1.84
Hmgb3O54879 Defb25-201ENSMUST00000099203 293 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
Hmgb3O54879 Gm6043-201ENSMUST00000099961 492 ntBASIC3.53□□□□□ -1.84
Hmgb3O54879 Gm29325-201ENSMUST00000190705 2528 ntBASIC3.53□□□□□ -1.84
Hmgb3O54879 Gm16421-201ENSMUST00000117616 1557 ntBASIC3.53□□□□□ -1.84
Hmgb3O54879 Pik3c2a-201ENSMUST00000170430 8044 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.85
Hmgb3O54879 Olfr715-202ENSMUST00000214919 5114 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.85
Hmgb3O54879 Nlrp4e-201ENSMUST00000076470 3382 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
Hmgb3O54879 Gm6367-201ENSMUST00000178646 2464 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
Hmgb3O54879 Gm45093-201ENSMUST00000206859 2463 ntBASIC3.52□□□□□ -1.85
Hmgb3O54879 AC091683.1-201ENSMUST00000222307 2446 ntBASIC3.52□□□□□ -1.85
Hmgb3O54879 Gm42876-201ENSMUST00000196989 3215 ntBASIC3.52□□□□□ -1.85
Hmgb3O54879 AC152162.1-201ENSMUST00000225910 2917 ntBASIC3.52□□□□□ -1.85
Hmgb3O54879 Synj2bp-202ENSMUST00000114201 1121 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
Hmgb3O54879 Gm3267-201ENSMUST00000118671 473 ntBASIC3.52□□□□□ -1.85
Hmgb3O54879 Gm15926-201ENSMUST00000120492 550 ntBASIC3.52□□□□□ -1.85
Hmgb3O54879 Gm15245-201ENSMUST00000129410 1186 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
Hmgb3O54879 Gm4660-201ENSMUST00000131499 403 ntBASIC3.52□□□□□ -1.85
Hmgb3O54879 Gm12735-201ENSMUST00000146218 651 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
Hmgb3O54879 Gm24441-201ENSMUST00000157235 281 ntBASIC3.52□□□□□ -1.85
Hmgb3O54879 Gm23781-201ENSMUST00000157940 308 ntBASIC3.52□□□□□ -1.85
Hmgb3O54879 Gm6245-201ENSMUST00000164699 768 ntBASIC3.52□□□□□ -1.85
Hmgb3O54879 Rd3l-201ENSMUST00000170525 984 ntAPPRIS P1 TSL 2 BASIC3.52□□□□□ -1.85
Hmgb3O54879 Gm28385-201ENSMUST00000185671 292 ntBASIC3.52□□□□□ -1.85
Hmgb3O54879 Gm29570-201ENSMUST00000185813 681 ntTSL 3 BASIC3.52□□□□□ -1.85
Hmgb3O54879 Gm28614-201ENSMUST00000186483 458 ntBASIC3.52□□□□□ -1.85
Hmgb3O54879 Il19-203ENSMUST00000187410 1135 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
Hmgb3O54879 Gm18752-202ENSMUST00000193627 587 ntTSL 3 BASIC3.52□□□□□ -1.85
Hmgb3O54879 A330074H02Rik-201ENSMUST00000194667 1039 ntBASIC3.52□□□□□ -1.85
Hmgb3O54879 Gm7825-201ENSMUST00000204046 416 ntBASIC3.52□□□□□ -1.85
Hmgb3O54879 Olfr1492-ps1-201ENSMUST00000207071 865 ntBASIC3.52□□□□□ -1.85
Hmgb3O54879 Gm45272-202ENSMUST00000209875 502 ntTSL 3 BASIC3.52□□□□□ -1.85
Hmgb3O54879 Gm45392-201ENSMUST00000210441 214 ntBASIC3.52□□□□□ -1.85
Hmgb3O54879 Olfr673-ps1-201ENSMUST00000210859 411 ntBASIC3.52□□□□□ -1.85
Hmgb3O54879 Olfr603-202ENSMUST00000218246 1021 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
Hmgb3O54879 AC108401.1-201ENSMUST00000219740 361 ntTSL 3 BASIC3.52□□□□□ -1.85
Hmgb3O54879 AC161884.2-201ENSMUST00000224513 227 ntBASIC3.52□□□□□ -1.85
Hmgb3O54879 AC160962.1-203ENSMUST00000225167 1105 ntAPPRIS P5 BASIC3.52□□□□□ -1.85
Hmgb3O54879 Uts2b-201ENSMUST00000070531 835 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
Hmgb3O54879 Olfr603-201ENSMUST00000071844 939 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
Hmgb3O54879 Gm26449-201ENSMUST00000082452 104 ntBASIC3.52□□□□□ -1.85
Hmgb3O54879 Gm26072-201ENSMUST00000083135 107 ntBASIC3.52□□□□□ -1.85
Hmgb3O54879 Gm10491-201ENSMUST00000085330 117 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
Hmgb3O54879 March1-202ENSMUST00000072482 3953 ntTSL 5 BASIC3.52□□□□□ -1.85
Hmgb3O54879 Nlrp2-201ENSMUST00000045022 3404 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
Hmgb3O54879 Gm42447-201ENSMUST00000200102 2903 ntBASIC3.52□□□□□ -1.85
Hmgb3O54879 Arrdc3-201ENSMUST00000099356 4101 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
Hmgb3O54879 AC126033.1-201ENSMUST00000227628 6773 ntBASIC3.52□□□□□ -1.85
Hmgb3O54879 Gm43486-201ENSMUST00000196431 4339 ntBASIC3.51□□□□□ -1.85
Hmgb3O54879 Gm3623-201ENSMUST00000173643 2747 ntBASIC3.51□□□□□ -1.85
Hmgb3O54879 Sult1c1-201ENSMUST00000024738 1556 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
Hmgb3O54879 Gm43508-201ENSMUST00000197251 3783 ntBASIC3.51□□□□□ -1.85
Hmgb3O54879 Olfr148-202ENSMUST00000216801 2775 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
Hmgb3O54879 Defa-ps15-201ENSMUST00000118178 477 ntBASIC3.51□□□□□ -1.85
Hmgb3O54879 Gm12244-201ENSMUST00000119500 291 ntBASIC3.51□□□□□ -1.85
Hmgb3O54879 Gm14434-201ENSMUST00000120521 559 ntTSL 3 BASIC3.51□□□□□ -1.85
Hmgb3O54879 Gm6305-201ENSMUST00000121027 1012 ntBASIC3.51□□□□□ -1.85
Hmgb3O54879 Gm14303-201ENSMUST00000121320 171 ntBASIC3.51□□□□□ -1.85
Hmgb3O54879 Xaf1-202ENSMUST00000140842 651 ntTSL 3 BASIC3.51□□□□□ -1.85
Hmgb3O54879 Gm14582-201ENSMUST00000141697 1189 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
Hmgb3O54879 Gm15767-202ENSMUST00000153786 544 ntTSL 3 BASIC3.51□□□□□ -1.85
Hmgb3O54879 Gm23229-201ENSMUST00000157297 105 ntBASIC3.51□□□□□ -1.85
Hmgb3O54879 Gm22895-201ENSMUST00000157508 308 ntBASIC3.51□□□□□ -1.85
Hmgb3O54879 Gm23385-201ENSMUST00000158592 295 ntBASIC3.51□□□□□ -1.85
Hmgb3O54879 Gm8358-201ENSMUST00000167222 555 ntBASIC3.51□□□□□ -1.85
Hmgb3O54879 Gm17160-201ENSMUST00000170645 260 ntTSL 3 BASIC3.51□□□□□ -1.85
Hmgb3O54879 Gm17430-201ENSMUST00000171339 474 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
Hmgb3O54879 4930509E16Rik-201ENSMUST00000181405 1191 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
Hmgb3O54879 Gm4258-201ENSMUST00000182127 506 ntTSL 2 BASIC3.51□□□□□ -1.85
Hmgb3O54879 Gm21070-201ENSMUST00000182425 985 ntBASIC3.51□□□□□ -1.85
Hmgb3O54879 Mir6343-201ENSMUST00000183584 84 ntBASIC3.51□□□□□ -1.85
Hmgb3O54879 Gm37300-201ENSMUST00000193327 280 ntBASIC3.51□□□□□ -1.85
Hmgb3O54879 Gm28724-202ENSMUST00000194218 295 ntBASIC3.51□□□□□ -1.85
Hmgb3O54879 Gm18843-201ENSMUST00000194982 719 ntBASIC3.51□□□□□ -1.85
Hmgb3O54879 Gm17954-201ENSMUST00000195893 607 ntBASIC3.51□□□□□ -1.85
Hmgb3O54879 Gm43774-201ENSMUST00000196327 878 ntBASIC3.51□□□□□ -1.85
Hmgb3O54879 Gm42610-201ENSMUST00000196557 650 ntTSL 3 BASIC3.51□□□□□ -1.85
Hmgb3O54879 Gm5288-201ENSMUST00000198323 1119 ntBASIC3.51□□□□□ -1.85
Hmgb3O54879 Gng12-208ENSMUST00000204511 739 ntTSL 5 BASIC3.51□□□□□ -1.85
Hmgb3O54879 Gm18007-201ENSMUST00000205019 844 ntBASIC3.51□□□□□ -1.85
Hmgb3O54879 Gm4290-201ENSMUST00000206897 814 ntBASIC3.51□□□□□ -1.85
Hmgb3O54879 Gm3816-201ENSMUST00000209803 433 ntBASIC3.51□□□□□ -1.85
Hmgb3O54879 4930567H12Rik-204ENSMUST00000213085 801 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
Retrieved 100 of 76,532 protein–RNA pairs in 61.1 ms