Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Gm42876-201ENSMUST00000196989 3215 ntBASIC4.42□□□□□ -1.7
H2afb2S4R1M3 Kcnj1-201ENSMUST00000047334 2987 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
H2afb2S4R1M3 AC147639.2-202ENSMUST00000224834 1545 ntBASIC4.42□□□□□ -1.7
H2afb2S4R1M3 Hdx-202ENSMUST00000113422 9534 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
H2afb2S4R1M3 Gm43009-201ENSMUST00000199979 3566 ntBASIC4.42□□□□□ -1.7
H2afb2S4R1M3 Vmn1r80-204ENSMUST00000227471 6368 ntBASIC4.42□□□□□ -1.7
H2afb2S4R1M3 Olfr1123-203ENSMUST00000216208 5245 ntAPPRIS ALT2 TSL 2 BASIC4.42□□□□□ -1.7
H2afb2S4R1M3 Smim8-203ENSMUST00000108132 864 ntAPPRIS P1 TSL 3 BASIC4.42□□□□□ -1.7
H2afb2S4R1M3 Gm15553-201ENSMUST00000118757 430 ntBASIC4.42□□□□□ -1.7
H2afb2S4R1M3 Gm12724-201ENSMUST00000140196 665 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
H2afb2S4R1M3 Nell1os-203ENSMUST00000152166 410 ntTSL 2 BASIC4.42□□□□□ -1.7
H2afb2S4R1M3 Gm23229-201ENSMUST00000157297 105 ntBASIC4.42□□□□□ -1.7
H2afb2S4R1M3 Gm24664-201ENSMUST00000158939 100 ntBASIC4.42□□□□□ -1.7
H2afb2S4R1M3 Gm21820-201ENSMUST00000179056 1083 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
H2afb2S4R1M3 Gm21971-201ENSMUST00000180187 337 ntTSL 5 BASIC4.42□□□□□ -1.7
H2afb2S4R1M3 Gm26992-201ENSMUST00000182089 468 ntAPPRIS P1 TSL 2 BASIC4.42□□□□□ -1.7
H2afb2S4R1M3 Rian-211ENSMUST00000182737 699 ntTSL 3 BASIC4.42□□□□□ -1.7
H2afb2S4R1M3 Gm5058-201ENSMUST00000187331 463 ntBASIC4.42□□□□□ -1.7
H2afb2S4R1M3 Gm23925-202ENSMUST00000188429 132 ntBASIC4.42□□□□□ -1.7
H2afb2S4R1M3 Gm37632-201ENSMUST00000191811 1142 ntBASIC4.42□□□□□ -1.7
H2afb2S4R1M3 Gm44077-201ENSMUST00000203453 435 ntTSL 2 BASIC4.42□□□□□ -1.7
H2afb2S4R1M3 Gm18877-201ENSMUST00000207706 539 ntBASIC4.42□□□□□ -1.7
H2afb2S4R1M3 Gm45137-201ENSMUST00000208652 4415 ntBASIC4.42□□□□□ -1.7
H2afb2S4R1M3 Gm21037-201ENSMUST00000209086 2608 ntBASIC4.42□□□□□ -1.7
H2afb2S4R1M3 AC166263.1-201ENSMUST00000218586 238 ntBASIC4.42□□□□□ -1.7
H2afb2S4R1M3 Gm46191-201ENSMUST00000218899 433 ntBASIC4.42□□□□□ -1.7
H2afb2S4R1M3 Rpl29-ps2-202ENSMUST00000220540 1165 ntTSL 5 BASIC4.42□□□□□ -1.7
H2afb2S4R1M3 Rpl29-ps2-203ENSMUST00000222043 1036 ntTSL 5 BASIC4.42□□□□□ -1.7
H2afb2S4R1M3 Gm33958-201ENSMUST00000222879 450 ntTSL 5 BASIC4.42□□□□□ -1.7
H2afb2S4R1M3 AC154441.1-201ENSMUST00000223653 1006 ntBASIC4.42□□□□□ -1.7
H2afb2S4R1M3 Mucl2-202ENSMUST00000226584 823 ntAPPRIS ALT2 BASIC4.42□□□□□ -1.7
H2afb2S4R1M3 AC139294.1-201ENSMUST00000226708 571 ntBASIC4.42□□□□□ -1.7
H2afb2S4R1M3 Olfr123-201ENSMUST00000054748 930 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
H2afb2S4R1M3 Vmn1r47-201ENSMUST00000074881 933 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
H2afb2S4R1M3 Olfr482-201ENSMUST00000081184 972 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
H2afb2S4R1M3 Vmn1r55-201ENSMUST00000098844 1284 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
H2afb2S4R1M3 Gm20139-202ENSMUST00000216041 3888 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
H2afb2S4R1M3 Cysltr1-202ENSMUST00000113480 5142 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
H2afb2S4R1M3 Ccser2-201ENSMUST00000067700 7334 ntTSL 5 BASIC4.42□□□□□ -1.7
H2afb2S4R1M3 Gm29048-202ENSMUST00000190399 1601 ntTSL 5 BASIC4.42□□□□□ -1.7
H2afb2S4R1M3 Gm42671-201ENSMUST00000198013 1604 ntBASIC4.42□□□□□ -1.7
H2afb2S4R1M3 Serpinb3a-201ENSMUST00000027567 1620 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
H2afb2S4R1M3 Vmn1r185-212ENSMUST00000228633 5385 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
H2afb2S4R1M3 Gm30302-202ENSMUST00000220773 3511 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
H2afb2S4R1M3 Zfp300-201ENSMUST00000040667 4634 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
H2afb2S4R1M3 Stag2-202ENSMUST00000115072 5955 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
H2afb2S4R1M3 Gm28940-201ENSMUST00000187929 1682 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
H2afb2S4R1M3 Gm37696-201ENSMUST00000194223 3349 ntBASIC4.41□□□□□ -1.7
H2afb2S4R1M3 Arhgap18-201ENSMUST00000039557 3651 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
H2afb2S4R1M3 Vmn2r89-202ENSMUST00000159734 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
H2afb2S4R1M3 Rd3l-203ENSMUST00000189759 1427 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
H2afb2S4R1M3 Neto2-201ENSMUST00000109686 5610 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
H2afb2S4R1M3 Gm43844-201ENSMUST00000202926 5605 ntBASIC4.41□□□□□ -1.7
H2afb2S4R1M3 Olfr1104-203ENSMUST00000215972 2797 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
H2afb2S4R1M3 Gm10375-201ENSMUST00000100692 836 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
H2afb2S4R1M3 Gm26376-201ENSMUST00000104784 110 ntBASIC4.41□□□□□ -1.7
H2afb2S4R1M3 Gm4910-201ENSMUST00000119605 366 ntBASIC4.41□□□□□ -1.7
H2afb2S4R1M3 Gm15780-201ENSMUST00000121283 935 ntBASIC4.41□□□□□ -1.7
H2afb2S4R1M3 Vmn1r-ps107-201ENSMUST00000121458 581 ntBASIC4.41□□□□□ -1.7
H2afb2S4R1M3 Gm13366-201ENSMUST00000122198 970 ntBASIC4.41□□□□□ -1.7
H2afb2S4R1M3 Gm23897-201ENSMUST00000158110 158 ntBASIC4.41□□□□□ -1.7
H2afb2S4R1M3 Gm17133-201ENSMUST00000170636 289 ntTSL 3 BASIC4.41□□□□□ -1.7
H2afb2S4R1M3 Malat1-203ENSMUST00000173499 485 ntTSL 3 BASIC4.41□□□□□ -1.7
H2afb2S4R1M3 Vmn1r-ps25-201ENSMUST00000173545 799 ntBASIC4.41□□□□□ -1.7
H2afb2S4R1M3 1700001F09Rik-201ENSMUST00000178178 884 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
H2afb2S4R1M3 Mir6374-201ENSMUST00000184003 107 ntBASIC4.41□□□□□ -1.7
H2afb2S4R1M3 Gm18342-201ENSMUST00000186987 694 ntBASIC4.41□□□□□ -1.7
H2afb2S4R1M3 A930005H10Rik-205ENSMUST00000187055 436 ntTSL 3 BASIC4.41□□□□□ -1.7
H2afb2S4R1M3 Gm21856-201ENSMUST00000187547 696 ntBASIC4.41□□□□□ -1.7
H2afb2S4R1M3 Gm2427-201ENSMUST00000189121 881 ntBASIC4.41□□□□□ -1.7
H2afb2S4R1M3 Gm21735-201ENSMUST00000190360 696 ntBASIC4.41□□□□□ -1.7
H2afb2S4R1M3 Gm28803-201ENSMUST00000190385 764 ntBASIC4.41□□□□□ -1.7
H2afb2S4R1M3 Gm37741-201ENSMUST00000191768 1256 ntBASIC4.41□□□□□ -1.7
H2afb2S4R1M3 Olfr416-ps1-201ENSMUST00000192734 804 ntBASIC4.41□□□□□ -1.7
H2afb2S4R1M3 Gm18867-201ENSMUST00000198022 1179 ntBASIC4.41□□□□□ -1.7
H2afb2S4R1M3 Gm5288-201ENSMUST00000198323 1119 ntBASIC4.41□□□□□ -1.7
H2afb2S4R1M3 Gm45651-201ENSMUST00000210857 335 ntBASIC4.41□□□□□ -1.7
H2afb2S4R1M3 Gm17915-201ENSMUST00000222077 548 ntBASIC4.41□□□□□ -1.7
H2afb2S4R1M3 AC102435.1-201ENSMUST00000222199 908 ntTSL 5 BASIC4.41□□□□□ -1.7
H2afb2S4R1M3 AC161453.1-201ENSMUST00000226078 884 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
H2afb2S4R1M3 Gm42681-201ENSMUST00000197999 1611 ntBASIC4.41□□□□□ -1.7
H2afb2S4R1M3 Ptprc-203ENSMUST00000182283 4702 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
H2afb2S4R1M3 Gm33680-202ENSMUST00000219411 3401 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
H2afb2S4R1M3 Hm629797-201ENSMUST00000183645 2398 ntBASIC4.41□□□□□ -1.7
H2afb2S4R1M3 Olfr291-202ENSMUST00000217039 3471 ntAPPRIS ALT2 TSL 2 BASIC4.41□□□□□ -1.7
H2afb2S4R1M3 1700097M23Rik-201ENSMUST00000204079 1522 ntBASIC4.41□□□□□ -1.7
H2afb2S4R1M3 Mga-203ENSMUST00000110773 13577 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.7
H2afb2S4R1M3 Olfr819-202ENSMUST00000216322 3930 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.7
H2afb2S4R1M3 Gm14806-201ENSMUST00000116606 2110 ntBASIC4.4□□□□□ -1.7
H2afb2S4R1M3 Fcrl5-203ENSMUST00000178261 1791 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.7
H2afb2S4R1M3 Gm45378-201ENSMUST00000211063 2711 ntBASIC4.4□□□□□ -1.7
H2afb2S4R1M3 Agtr1b-202ENSMUST00000163776 1633 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
H2afb2S4R1M3 Gm20631-201ENSMUST00000177239 5697 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
H2afb2S4R1M3 Gm15752-201ENSMUST00000117427 394 ntBASIC4.4□□□□□ -1.71
H2afb2S4R1M3 Gm13785-201ENSMUST00000119099 690 ntBASIC4.4□□□□□ -1.71
H2afb2S4R1M3 Gm5392-201ENSMUST00000122189 789 ntBASIC4.4□□□□□ -1.71
H2afb2S4R1M3 4933430M04Rik-201ENSMUST00000152726 744 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
H2afb2S4R1M3 Gm24690-201ENSMUST00000157759 97 ntBASIC4.4□□□□□ -1.71
H2afb2S4R1M3 Gm27940-201ENSMUST00000184449 98 ntBASIC4.4□□□□□ -1.71
H2afb2S4R1M3 Gm29031-201ENSMUST00000185316 614 ntBASIC4.4□□□□□ -1.71
Retrieved 100 of 76,532 protein–RNA pairs in 108.8 ms