Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Gm17025-201ENSMUST00000133273 580 ntTSL 2 BASIC4.34□□□□□ -1.71
Lima1Q9ERG0 Fpr2-202ENSMUST00000149944 883 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
Lima1Q9ERG0 Gm8374-201ENSMUST00000163826 672 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
Lima1Q9ERG0 4930519F16Rik-206ENSMUST00000183292 800 ntBASIC4.34□□□□□ -1.71
Lima1Q9ERG0 1700054K19Rik-201ENSMUST00000186102 452 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
Lima1Q9ERG0 Gm28186-201ENSMUST00000187447 679 ntBASIC4.34□□□□□ -1.71
Lima1Q9ERG0 Gm28721-201ENSMUST00000187649 918 ntTSL 3 BASIC4.34□□□□□ -1.71
Lima1Q9ERG0 Gm43237-201ENSMUST00000196835 1044 ntBASIC4.34□□□□□ -1.71
Lima1Q9ERG0 Gm43449-201ENSMUST00000202955 371 ntTSL 3 BASIC4.34□□□□□ -1.71
Lima1Q9ERG0 Olfr540-ps1-201ENSMUST00000210499 612 ntBASIC4.34□□□□□ -1.71
Lima1Q9ERG0 Gm7128-201ENSMUST00000211639 533 ntBASIC4.34□□□□□ -1.71
Lima1Q9ERG0 4930503L19Rik-202ENSMUST00000211817 913 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
Lima1Q9ERG0 Jakmip1-216ENSMUST00000212997 138 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
Lima1Q9ERG0 Gm17915-201ENSMUST00000222077 548 ntBASIC4.34□□□□□ -1.71
Lima1Q9ERG0 AC154239.2-201ENSMUST00000227859 233 ntBASIC4.34□□□□□ -1.71
Lima1Q9ERG0 Olfr1026-201ENSMUST00000056718 965 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
Lima1Q9ERG0 Olfr693-201ENSMUST00000057817 952 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
Lima1Q9ERG0 Olfr781-201ENSMUST00000075613 936 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
Lima1Q9ERG0 Gm23510-201ENSMUST00000083083 163 ntBASIC4.34□□□□□ -1.71
Lima1Q9ERG0 Stk-ps2-201ENSMUST00000051224 4667 ntTSL 2 BASIC4.34□□□□□ -1.71
Lima1Q9ERG0 Olfr799-205ENSMUST00000217364 1580 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
Lima1Q9ERG0 Gm2888-201ENSMUST00000170521 1758 ntAPPRIS P5 TSL 5 BASIC4.34□□□□□ -1.71
Lima1Q9ERG0 Gm7876-202ENSMUST00000171305 1758 ntAPPRIS P5 TSL 5 BASIC4.34□□□□□ -1.71
Lima1Q9ERG0 Gm45517-201ENSMUST00000209973 2468 ntBASIC4.34□□□□□ -1.72
Lima1Q9ERG0 CAAA01194877.1-201ENSMUST00000213137 4233 ntBASIC4.34□□□□□ -1.72
Lima1Q9ERG0 Vmn1r184-202ENSMUST00000227230 7999 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
Lima1Q9ERG0 Gm43826-201ENSMUST00000199604 2612 ntBASIC4.33□□□□□ -1.72
Lima1Q9ERG0 Olfr270-203ENSMUST00000215010 2502 ntAPPRIS ALT1 TSL 5 BASIC4.33□□□□□ -1.72
Lima1Q9ERG0 Zfp984-202ENSMUST00000122309 2405 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Lima1Q9ERG0 Gm45235-201ENSMUST00000208016 4465 ntBASIC4.33□□□□□ -1.72
Lima1Q9ERG0 Igf1-202ENSMUST00000095360 7052 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Lima1Q9ERG0 Fbxw23-202ENSMUST00000198480 1388 ntBASIC4.33□□□□□ -1.72
Lima1Q9ERG0 Serpinb6c-201ENSMUST00000110273 1325 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Lima1Q9ERG0 Traj31-201ENSMUST00000103710 57 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
Lima1Q9ERG0 Mup-ps18-201ENSMUST00000120145 531 ntBASIC4.33□□□□□ -1.72
Lima1Q9ERG0 Gm12222-201ENSMUST00000121368 260 ntBASIC4.33□□□□□ -1.72
Lima1Q9ERG0 Gm11844-201ENSMUST00000129207 459 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
Lima1Q9ERG0 Gm13599-201ENSMUST00000134476 678 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
Lima1Q9ERG0 Gm24251-201ENSMUST00000157324 114 ntBASIC4.33□□□□□ -1.72
Lima1Q9ERG0 Gm24689-201ENSMUST00000157760 104 ntBASIC4.33□□□□□ -1.72
Lima1Q9ERG0 Gm23082-201ENSMUST00000157852 133 ntBASIC4.33□□□□□ -1.72
Lima1Q9ERG0 Gm25553-201ENSMUST00000158076 79 ntBASIC4.33□□□□□ -1.72
Lima1Q9ERG0 Gm26034-201ENSMUST00000158154 116 ntBASIC4.33□□□□□ -1.72
Lima1Q9ERG0 Vmn1r103-201ENSMUST00000163461 918 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
Lima1Q9ERG0 Vmn1r122-201ENSMUST00000164409 918 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
Lima1Q9ERG0 Vmn1r151-201ENSMUST00000166079 918 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
Lima1Q9ERG0 Vmn1r159-201ENSMUST00000167871 918 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
Lima1Q9ERG0 Mir7022-201ENSMUST00000183749 61 ntBASIC4.33□□□□□ -1.72
Lima1Q9ERG0 Gm28976-201ENSMUST00000188070 144 ntBASIC4.33□□□□□ -1.72
Lima1Q9ERG0 1700113H08Rik-203ENSMUST00000189775 798 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
Lima1Q9ERG0 Gm29138-201ENSMUST00000191444 348 ntBASIC4.33□□□□□ -1.72
Lima1Q9ERG0 Gm43574-201ENSMUST00000196226 809 ntTSL 3 BASIC4.33□□□□□ -1.72
Lima1Q9ERG0 AC120011.1-201ENSMUST00000202147 744 ntBASIC4.33□□□□□ -1.72
Lima1Q9ERG0 Gm44138-201ENSMUST00000204939 271 ntBASIC4.33□□□□□ -1.72
Lima1Q9ERG0 AC156832.3-201ENSMUST00000215591 435 ntBASIC4.33□□□□□ -1.72
Lima1Q9ERG0 AC134537.2-201ENSMUST00000217770 575 ntBASIC4.33□□□□□ -1.72
Lima1Q9ERG0 Gm18442-201ENSMUST00000220925 639 ntBASIC4.33□□□□□ -1.72
Lima1Q9ERG0 AC124356.2-201ENSMUST00000221874 336 ntBASIC4.33□□□□□ -1.72
Lima1Q9ERG0 Iapp-201ENSMUST00000041993 839 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Lima1Q9ERG0 Olfr957-201ENSMUST00000051653 936 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
Lima1Q9ERG0 Gm6195-201ENSMUST00000063059 357 ntBASIC4.33□□□□□ -1.72
Lima1Q9ERG0 Olfr1301-201ENSMUST00000080094 939 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
Lima1Q9ERG0 Mir28a-201ENSMUST00000083560 86 ntBASIC4.33□□□□□ -1.72
Lima1Q9ERG0 Gm25099-201ENSMUST00000093716 116 ntBASIC4.33□□□□□ -1.72
Lima1Q9ERG0 Olfr716-207ENSMUST00000216871 4062 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Lima1Q9ERG0 Polk-205ENSMUST00000221899 2319 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
Lima1Q9ERG0 Olfr128-202ENSMUST00000216440 3644 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Lima1Q9ERG0 Kcnb2-201ENSMUST00000170146 14845 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Lima1Q9ERG0 Cfhr1-201ENSMUST00000023965 1793 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Lima1Q9ERG0 Chl1-201ENSMUST00000066905 7562 ntAPPRIS P2 TSL 1 (best) BASIC4.32□□□□□ -1.72
Lima1Q9ERG0 B3galt1-201ENSMUST00000042456 2855 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Lima1Q9ERG0 Gm16421-201ENSMUST00000117616 1557 ntBASIC4.32□□□□□ -1.72
Lima1Q9ERG0 Gm38106-201ENSMUST00000194107 2534 ntBASIC4.32□□□□□ -1.72
Lima1Q9ERG0 Vsig4-201ENSMUST00000050707 1432 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Lima1Q9ERG0 Gm22498-201ENSMUST00000104497 86 ntBASIC4.32□□□□□ -1.72
Lima1Q9ERG0 Gm22899-201ENSMUST00000104540 131 ntBASIC4.32□□□□□ -1.72
Lima1Q9ERG0 Gm14305-201ENSMUST00000108980 1167 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Lima1Q9ERG0 Cask-202ENSMUST00000115435 726 ntTSL 3 BASIC4.32□□□□□ -1.72
Lima1Q9ERG0 Gm13430-201ENSMUST00000121366 288 ntBASIC4.32□□□□□ -1.72
Lima1Q9ERG0 Gm11349-201ENSMUST00000122209 1116 ntBASIC4.32□□□□□ -1.72
Lima1Q9ERG0 Gm26310-201ENSMUST00000157766 117 ntBASIC4.32□□□□□ -1.72
Lima1Q9ERG0 Gm22355-201ENSMUST00000175531 96 ntBASIC4.32□□□□□ -1.72
Lima1Q9ERG0 Lipo1-202ENSMUST00000178735 1188 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
Lima1Q9ERG0 Gm26763-201ENSMUST00000180968 1093 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Lima1Q9ERG0 Il19-203ENSMUST00000187410 1135 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
Lima1Q9ERG0 Gm28190-201ENSMUST00000189766 722 ntBASIC4.32□□□□□ -1.72
Lima1Q9ERG0 Gm18382-201ENSMUST00000194394 582 ntBASIC4.32□□□□□ -1.72
Lima1Q9ERG0 Gm37720-201ENSMUST00000195497 1241 ntBASIC4.32□□□□□ -1.72
Lima1Q9ERG0 Gm44474-201ENSMUST00000196525 127 ntBASIC4.32□□□□□ -1.72
Lima1Q9ERG0 Gm43828-201ENSMUST00000196890 639 ntBASIC4.32□□□□□ -1.72
Lima1Q9ERG0 Olfr202-202ENSMUST00000201687 1232 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
Lima1Q9ERG0 C78283-201ENSMUST00000202711 848 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Lima1Q9ERG0 Gm44603-201ENSMUST00000206820 367 ntBASIC4.32□□□□□ -1.72
Lima1Q9ERG0 Gm35326-201ENSMUST00000218234 1041 ntTSL 5 BASIC4.32□□□□□ -1.72
Lima1Q9ERG0 CT485612.3-201ENSMUST00000222179 408 ntBASIC4.32□□□□□ -1.72
Lima1Q9ERG0 Enkur-201ENSMUST00000027992 1199 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Lima1Q9ERG0 Capza3-201ENSMUST00000043797 1222 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
Lima1Q9ERG0 Olfr1323-201ENSMUST00000057071 930 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
Lima1Q9ERG0 Olfr1495-201ENSMUST00000061669 1089 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
Lima1Q9ERG0 Olfr190-201ENSMUST00000071243 924 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
Retrieved 100 of 76,532 protein–RNA pairs in 110.6 ms