Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Vmn2r89-202ENSMUST00000159734 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
Cdc40Q9DC48 Hormad1-203ENSMUST00000107154 1444 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
Cdc40Q9DC48 Hormad1-204ENSMUST00000171191 1437 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
Cdc40Q9DC48 Olfr1196-202ENSMUST00000216928 4270 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
Cdc40Q9DC48 6720464F23Rik-201ENSMUST00000193946 3496 ntBASIC4.29□□□□□ -1.72
Cdc40Q9DC48 Gm42910-201ENSMUST00000198917 2921 ntBASIC4.28□□□□□ -1.72
Cdc40Q9DC48 Gm2396-202ENSMUST00000188232 3433 ntTSL 5 BASIC4.28□□□□□ -1.72
Cdc40Q9DC48 4930435E12Rik-201ENSMUST00000122078 1368 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Cdc40Q9DC48 Olfr131-202ENSMUST00000172933 1358 ntAPPRIS P1 TSL 3 BASIC4.28□□□□□ -1.72
Cdc40Q9DC48 Gm15128-202ENSMUST00000178833 1350 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
Cdc40Q9DC48 Olfr270-204ENSMUST00000215127 3145 ntAPPRIS ALT1 TSL 5 BASIC4.28□□□□□ -1.72
Cdc40Q9DC48 Vmn2r17-201ENSMUST00000171841 2550 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
Cdc40Q9DC48 Olfr753-ps1-204ENSMUST00000219487 2956 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
Cdc40Q9DC48 Gm4166-201ENSMUST00000220893 2996 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
Cdc40Q9DC48 Olfr1016-203ENSMUST00000217410 2738 ntAPPRIS P1 TSL 3 BASIC4.28□□□□□ -1.72
Cdc40Q9DC48 Gm5746-201ENSMUST00000183550 2200 ntBASIC4.28□□□□□ -1.72
Cdc40Q9DC48 Pcsk2os2-201ENSMUST00000153878 3370 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
Cdc40Q9DC48 Mga-203ENSMUST00000110773 13577 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
Cdc40Q9DC48 Prl2c1-202ENSMUST00000110335 852 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
Cdc40Q9DC48 Gm14878-201ENSMUST00000118167 293 ntBASIC4.28□□□□□ -1.72
Cdc40Q9DC48 Gm14352-201ENSMUST00000119250 449 ntBASIC4.28□□□□□ -1.72
Cdc40Q9DC48 Gm12379-201ENSMUST00000119607 391 ntBASIC4.28□□□□□ -1.72
Cdc40Q9DC48 Gm14516-201ENSMUST00000120012 252 ntBASIC4.28□□□□□ -1.72
Cdc40Q9DC48 Gm12909-201ENSMUST00000134190 620 ntTSL 2 BASIC4.28□□□□□ -1.72
Cdc40Q9DC48 Gm11861-201ENSMUST00000141571 382 ntTSL 3 BASIC4.28□□□□□ -1.72
Cdc40Q9DC48 Gm13411-201ENSMUST00000149429 414 ntTSL 2 BASIC4.28□□□□□ -1.72
Cdc40Q9DC48 Gm23906-201ENSMUST00000157573 128 ntBASIC4.28□□□□□ -1.72
Cdc40Q9DC48 Gm16285-201ENSMUST00000162999 347 ntBASIC4.28□□□□□ -1.72
Cdc40Q9DC48 Gm20428-201ENSMUST00000174365 283 ntBASIC4.28□□□□□ -1.72
Cdc40Q9DC48 4930519F16Rik-206ENSMUST00000183292 800 ntBASIC4.28□□□□□ -1.72
Cdc40Q9DC48 Gm27568-201ENSMUST00000184220 99 ntBASIC4.28□□□□□ -1.72
Cdc40Q9DC48 Mir6926-201ENSMUST00000184562 68 ntBASIC4.28□□□□□ -1.72
Cdc40Q9DC48 Gm28685-201ENSMUST00000187545 1101 ntBASIC4.28□□□□□ -1.72
Cdc40Q9DC48 Gm29668-201ENSMUST00000187802 315 ntBASIC4.28□□□□□ -1.72
Cdc40Q9DC48 Gm28763-201ENSMUST00000188870 166 ntTSL 5 BASIC4.28□□□□□ -1.72
Cdc40Q9DC48 Gm20830-202ENSMUST00000190426 1221 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Cdc40Q9DC48 Gm29579-201ENSMUST00000190820 166 ntTSL 5 BASIC4.28□□□□□ -1.72
Cdc40Q9DC48 Gm37670-201ENSMUST00000193622 229 ntBASIC4.28□□□□□ -1.72
Cdc40Q9DC48 Gm37167-201ENSMUST00000194946 396 ntBASIC4.28□□□□□ -1.72
Cdc40Q9DC48 Gm2622-201ENSMUST00000200018 471 ntBASIC4.28□□□□□ -1.72
Cdc40Q9DC48 Gm43151-201ENSMUST00000201093 657 ntTSL 3 BASIC4.28□□□□□ -1.72
Cdc40Q9DC48 AC120011.1-201ENSMUST00000202147 744 ntBASIC4.28□□□□□ -1.72
Cdc40Q9DC48 Gm9560-201ENSMUST00000205012 1201 ntBASIC4.28□□□□□ -1.72
Cdc40Q9DC48 2210406H18Rik-201ENSMUST00000207806 1108 ntBASIC4.28□□□□□ -1.72
Cdc40Q9DC48 AC166902.1-201ENSMUST00000216653 517 ntBASIC4.28□□□□□ -1.72
Cdc40Q9DC48 AC159252.1-201ENSMUST00000224450 553 ntBASIC4.28□□□□□ -1.72
Cdc40Q9DC48 AC141884.1-201ENSMUST00000226327 636 ntBASIC4.28□□□□□ -1.72
Cdc40Q9DC48 AC098742.1-201ENSMUST00000227945 373 ntBASIC4.28□□□□□ -1.72
Cdc40Q9DC48 Cr2-201ENSMUST00000043104 1044 ntTSL 5 BASIC4.28□□□□□ -1.72
Cdc40Q9DC48 Fam183b-201ENSMUST00000060581 493 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
Cdc40Q9DC48 Olfr968-201ENSMUST00000075928 1027 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
Cdc40Q9DC48 Olfr135-201ENSMUST00000076245 1079 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
Cdc40Q9DC48 Olfr510-201ENSMUST00000076289 945 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
Cdc40Q9DC48 Ccl26-201ENSMUST00000094226 282 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Cdc40Q9DC48 Olfr1297-201ENSMUST00000099612 939 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
Cdc40Q9DC48 Adam24-201ENSMUST00000051614 2887 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Cdc40Q9DC48 AC162938.2-205ENSMUST00000217551 2828 ntBASIC4.28□□□□□ -1.72
Cdc40Q9DC48 Zfp989-202ENSMUST00000146688 2295 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Cdc40Q9DC48 Olfr59-201ENSMUST00000143976 3088 ntAPPRIS P1 TSL 3 BASIC4.27□□□□□ -1.73
Cdc40Q9DC48 Cfhr1-201ENSMUST00000023965 1793 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Cdc40Q9DC48 Kcnt2-203ENSMUST00000120796 3540 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Cdc40Q9DC48 Ankrd28-204ENSMUST00000227089 3522 ntBASIC4.27□□□□□ -1.73
Cdc40Q9DC48 Nebl-202ENSMUST00000124270 8079 ntTSL 5 BASIC4.27□□□□□ -1.73
Cdc40Q9DC48 Vmn1r35-202ENSMUST00000227346 1854 ntBASIC4.27□□□□□ -1.73
Cdc40Q9DC48 Olfr799-203ENSMUST00000214182 1694 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Cdc40Q9DC48 Gm14909-201ENSMUST00000117853 351 ntBASIC4.27□□□□□ -1.73
Cdc40Q9DC48 Defa-ps15-201ENSMUST00000118178 477 ntBASIC4.27□□□□□ -1.73
Cdc40Q9DC48 Gm13220-201ENSMUST00000121535 508 ntBASIC4.27□□□□□ -1.73
Cdc40Q9DC48 Olfr405-ps1-202ENSMUST00000127098 711 ntTSL 3 BASIC4.27□□□□□ -1.73
Cdc40Q9DC48 Olfr367-ps-202ENSMUST00000143957 942 ntBASIC4.27□□□□□ -1.73
Cdc40Q9DC48 Zakit-201ENSMUST00000157677 308 ntBASIC4.27□□□□□ -1.73
Cdc40Q9DC48 Gm4842-201ENSMUST00000183237 835 ntBASIC4.27□□□□□ -1.73
Cdc40Q9DC48 1700003C15Rik-201ENSMUST00000185360 1224 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Cdc40Q9DC48 Gm28803-201ENSMUST00000190385 764 ntBASIC4.27□□□□□ -1.73
Cdc40Q9DC48 Gm44077-201ENSMUST00000203453 435 ntTSL 2 BASIC4.27□□□□□ -1.73
Cdc40Q9DC48 Gm2522-201ENSMUST00000204280 322 ntBASIC4.27□□□□□ -1.73
Cdc40Q9DC48 Gm44237-201ENSMUST00000205183 936 ntBASIC4.27□□□□□ -1.73
Cdc40Q9DC48 Gm30954-201ENSMUST00000208715 1210 ntTSL 5 BASIC4.27□□□□□ -1.73
Cdc40Q9DC48 4930518J21Rik-201ENSMUST00000209557 573 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Cdc40Q9DC48 Gm3086-202ENSMUST00000221248 310 ntBASIC4.27□□□□□ -1.73
Cdc40Q9DC48 Gm40662-201ENSMUST00000222208 453 ntTSL 5 BASIC4.27□□□□□ -1.73
Cdc40Q9DC48 Gm40662-202ENSMUST00000222263 487 ntTSL 5 BASIC4.27□□□□□ -1.73
Cdc40Q9DC48 AC155805.1-201ENSMUST00000222419 3808 ntBASIC4.27□□□□□ -1.73
Cdc40Q9DC48 AC124408.1-201ENSMUST00000228938 707 ntBASIC4.27□□□□□ -1.73
Cdc40Q9DC48 Prss37-201ENSMUST00000031967 1049 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Cdc40Q9DC48 Olfr816-201ENSMUST00000071605 939 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Cdc40Q9DC48 Gm6065-201ENSMUST00000081336 492 ntBASIC4.27□□□□□ -1.73
Cdc40Q9DC48 Gm25140-201ENSMUST00000083254 140 ntBASIC4.27□□□□□ -1.73
Cdc40Q9DC48 Defa-ps18-201ENSMUST00000098889 371 ntBASIC4.27□□□□□ -1.73
Cdc40Q9DC48 Gm6043-201ENSMUST00000099961 492 ntBASIC4.27□□□□□ -1.73
Cdc40Q9DC48 Gm10484-201ENSMUST00000196372 4759 ntBASIC4.27□□□□□ -1.73
Cdc40Q9DC48 Nfatc3-202ENSMUST00000211991 3712 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
Cdc40Q9DC48 Stk-ps2-201ENSMUST00000051224 4667 ntTSL 2 BASIC4.27□□□□□ -1.73
Cdc40Q9DC48 4930579C12Rik-202ENSMUST00000187015 3676 ntTSL 2 BASIC4.27□□□□□ -1.73
Cdc40Q9DC48 Ndst4-205ENSMUST00000174648 4996 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Cdc40Q9DC48 Gm20515-201ENSMUST00000174440 4824 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Cdc40Q9DC48 Gm36298-201ENSMUST00000223394 1732 ntBASIC4.26□□□□□ -1.73
Cdc40Q9DC48 Zfp426-201ENSMUST00000080386 2417 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
Cdc40Q9DC48 Olfr1331-203ENSMUST00000216589 3139 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
Cdc40Q9DC48 Gm17131-201ENSMUST00000164420 3846 ntBASIC4.26□□□□□ -1.73
Retrieved 100 of 76,532 protein–RNA pairs in 72.7 ms