Protein–RNA interactions for Protein: Q9D1C8

Vps28, Vacuolar protein sorting-associated protein 28 homolog, mousemouse

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps28Q9D1C8 Gm27036-201ENSMUST00000182465 980 ntBASIC5.02□□□□□ -1.61
Vps28Q9D1C8 Trav14d-1-202ENSMUST00000187138 340 ntAPPRIS ALT2 BASIC5.02□□□□□ -1.61
Vps28Q9D1C8 Gm28974-201ENSMUST00000187893 231 ntBASIC5.02□□□□□ -1.61
Vps28Q9D1C8 Gm38141-201ENSMUST00000192540 317 ntTSL 5 BASIC5.02□□□□□ -1.61
Vps28Q9D1C8 Gm37002-201ENSMUST00000194560 373 ntBASIC5.02□□□□□ -1.61
Vps28Q9D1C8 Gm44300-201ENSMUST00000196792 121 ntBASIC5.02□□□□□ -1.61
Vps28Q9D1C8 Gm42761-201ENSMUST00000201899 738 ntTSL 3 BASIC5.02□□□□□ -1.61
Vps28Q9D1C8 Olfr1479-ps1-201ENSMUST00000207752 382 ntBASIC5.02□□□□□ -1.61
Vps28Q9D1C8 Gm8264-201ENSMUST00000217801 465 ntBASIC5.02□□□□□ -1.61
Vps28Q9D1C8 AC155236.1-201ENSMUST00000220591 923 ntTSL 5 BASIC5.02□□□□□ -1.61
Vps28Q9D1C8 Enkur-201ENSMUST00000027992 1199 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Vps28Q9D1C8 Olfr273-201ENSMUST00000051520 1059 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
Vps28Q9D1C8 Olfr1020-201ENSMUST00000055840 1079 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
Vps28Q9D1C8 Gm23975-201ENSMUST00000082685 106 ntBASIC5.02□□□□□ -1.61
Vps28Q9D1C8 n-R5s205-201ENSMUST00000083149 125 ntBASIC5.02□□□□□ -1.61
Vps28Q9D1C8 Clk4-202ENSMUST00000109111 1427 ntTSL 2 BASIC5.02□□□□□ -1.61
Vps28Q9D1C8 Pou2f1-208ENSMUST00000160260 13022 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
Vps28Q9D1C8 Gm38104-201ENSMUST00000195121 1895 ntBASIC5.02□□□□□ -1.61
Vps28Q9D1C8 Gm45149-201ENSMUST00000206459 2172 ntBASIC5.02□□□□□ -1.61
Vps28Q9D1C8 Ank2-207ENSMUST00000182064 12413 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
Vps28Q9D1C8 Nfat5-202ENSMUST00000077440 12773 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
Vps28Q9D1C8 Chrnb3-203ENSMUST00000211104 3241 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Vps28Q9D1C8 P2ry12-202ENSMUST00000170388 2101 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Vps28Q9D1C8 Vmn2r117-201ENSMUST00000171996 2574 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Vps28Q9D1C8 Rbm44-201ENSMUST00000094698 3851 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Vps28Q9D1C8 Gm13582-201ENSMUST00000146034 2655 ntTSL 2 BASIC5.01□□□□□ -1.61
Vps28Q9D1C8 Gm45129-201ENSMUST00000208444 2224 ntBASIC5.01□□□□□ -1.61
Vps28Q9D1C8 Gm43121-201ENSMUST00000199065 1305 ntBASIC5.01□□□□□ -1.61
Vps28Q9D1C8 Dmxl2-202ENSMUST00000118600 9465 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
Vps28Q9D1C8 4933423P22Rik-201ENSMUST00000126219 4595 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Vps28Q9D1C8 Ighv1-4-201ENSMUST00000103493 351 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
Vps28Q9D1C8 Mir879-201ENSMUST00000104703 76 ntBASIC5.01□□□□□ -1.61
Vps28Q9D1C8 Cyp2j14-ps-201ENSMUST00000117776 361 ntBASIC5.01□□□□□ -1.61
Vps28Q9D1C8 Gm15297-201ENSMUST00000117795 290 ntBASIC5.01□□□□□ -1.61
Vps28Q9D1C8 Gm16471-201ENSMUST00000121940 618 ntBASIC5.01□□□□□ -1.61
Vps28Q9D1C8 Gm14027-201ENSMUST00000135186 622 ntTSL 3 BASIC5.01□□□□□ -1.61
Vps28Q9D1C8 Gm14011-201ENSMUST00000145178 302 ntTSL 2 BASIC5.01□□□□□ -1.61
Vps28Q9D1C8 Gm26310-201ENSMUST00000157766 117 ntBASIC5.01□□□□□ -1.61
Vps28Q9D1C8 Obox2-202ENSMUST00000172478 818 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
Vps28Q9D1C8 Vmn2r-ps74-201ENSMUST00000174705 917 ntBASIC5.01□□□□□ -1.61
Vps28Q9D1C8 Rian-217ENSMUST00000183266 687 ntTSL 3 BASIC5.01□□□□□ -1.61
Vps28Q9D1C8 Gm37219-201ENSMUST00000192036 926 ntBASIC5.01□□□□□ -1.61
Vps28Q9D1C8 Gm33206-201ENSMUST00000193544 454 ntTSL 2 BASIC5.01□□□□□ -1.61
Vps28Q9D1C8 Gm38163-201ENSMUST00000194112 482 ntTSL 5 BASIC5.01□□□□□ -1.61
Vps28Q9D1C8 Gm43968-201ENSMUST00000203388 389 ntBASIC5.01□□□□□ -1.61
Vps28Q9D1C8 Gm5581-202ENSMUST00000204992 714 ntTSL 3 BASIC5.01□□□□□ -1.61
Vps28Q9D1C8 Gm3816-201ENSMUST00000209803 433 ntBASIC5.01□□□□□ -1.61
Vps28Q9D1C8 Gm7639-201ENSMUST00000212608 484 ntBASIC5.01□□□□□ -1.61
Vps28Q9D1C8 AC127279.1-201ENSMUST00000220140 637 ntBASIC5.01□□□□□ -1.61
Vps28Q9D1C8 Gm6841-201ENSMUST00000220602 598 ntBASIC5.01□□□□□ -1.61
Vps28Q9D1C8 AC159622.1-201ENSMUST00000221004 554 ntBASIC5.01□□□□□ -1.61
Vps28Q9D1C8 AC211878.2-201ENSMUST00000222486 488 ntBASIC5.01□□□□□ -1.61
Vps28Q9D1C8 AC125543.1-201ENSMUST00000222778 101 ntBASIC5.01□□□□□ -1.61
Vps28Q9D1C8 Zmym2-202ENSMUST00000223669 1281 ntBASIC5.01□□□□□ -1.61
Vps28Q9D1C8 C2cd6b-201ENSMUST00000054653 878 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Vps28Q9D1C8 Mup14-201ENSMUST00000071005 652 ntAPPRIS P1 TSL 2 BASIC5.01□□□□□ -1.61
Vps28Q9D1C8 Vmn1r215-201ENSMUST00000072972 1048 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
Vps28Q9D1C8 Defb35-201ENSMUST00000076786 267 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Vps28Q9D1C8 Olfr1469-201ENSMUST00000077538 930 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
Vps28Q9D1C8 Gm26064-201ENSMUST00000083381 109 ntBASIC5.01□□□□□ -1.61
Vps28Q9D1C8 Olfr1290-201ENSMUST00000099616 939 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
Vps28Q9D1C8 Btbd35f15-201ENSMUST00000186329 1917 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
Vps28Q9D1C8 Vmn1r217-202ENSMUST00000227110 9888 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
Vps28Q9D1C8 Tfec-201ENSMUST00000031533 1787 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Vps28Q9D1C8 Olfr1438-ps1-201ENSMUST00000208398 4761 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
Vps28Q9D1C8 A430027C01Rik-201ENSMUST00000194599 1644 ntBASIC5.01□□□□□ -1.61
Vps28Q9D1C8 Mmp12-203ENSMUST00000120655 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
Vps28Q9D1C8 1700017N19Rik-206ENSMUST00000190386 1483 ntTSL 5 BASIC5□□□□□ -1.61
Vps28Q9D1C8 Gm10436-201ENSMUST00000071580 1883 ntAPPRIS P2 TSL 1 (best) BASIC5□□□□□ -1.61
Vps28Q9D1C8 Gm40909-202ENSMUST00000223275 5564 ntTSL 5 BASIC5□□□□□ -1.61
Vps28Q9D1C8 Gm38212-201ENSMUST00000194081 2756 ntBASIC5□□□□□ -1.61
Vps28Q9D1C8 C130079G13Rik-201ENSMUST00000049476 2789 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Vps28Q9D1C8 Zfy1-201ENSMUST00000065545 2783 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Vps28Q9D1C8 Gm37900-201ENSMUST00000195510 3805 ntBASIC5□□□□□ -1.61
Vps28Q9D1C8 Gm43369-201ENSMUST00000196373 1552 ntBASIC5□□□□□ -1.61
Vps28Q9D1C8 Olfr1459-202ENSMUST00000213493 8854 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
Vps28Q9D1C8 Postn-204ENSMUST00000117373 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
Vps28Q9D1C8 Vmn1r5-202ENSMUST00000226130 3393 ntAPPRIS P1 BASIC5□□□□□ -1.61
Vps28Q9D1C8 AC102431.1-201ENSMUST00000223773 1449 ntBASIC5□□□□□ -1.61
Vps28Q9D1C8 Fastkd2-201ENSMUST00000027103 4486 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Vps28Q9D1C8 Txndc8-201ENSMUST00000102897 620 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Vps28Q9D1C8 Gm3020-201ENSMUST00000112801 450 ntTSL 5 BASIC5□□□□□ -1.61
Vps28Q9D1C8 Gm12423-201ENSMUST00000118334 135 ntBASIC5□□□□□ -1.61
Vps28Q9D1C8 Gm12287-201ENSMUST00000119770 707 ntBASIC5□□□□□ -1.61
Vps28Q9D1C8 Gm22343-201ENSMUST00000122648 286 ntBASIC5□□□□□ -1.61
Vps28Q9D1C8 Gm14697-201ENSMUST00000147144 648 ntTSL 1 (best) BASIC5□□□□□ -1.61
Vps28Q9D1C8 Gm15866-201ENSMUST00000149048 785 ntTSL 5 BASIC5□□□□□ -1.61
Vps28Q9D1C8 Gm26490-201ENSMUST00000157879 140 ntBASIC5□□□□□ -1.61
Vps28Q9D1C8 Has2os-203ENSMUST00000165880 638 ntTSL 2 BASIC5□□□□□ -1.61
Vps28Q9D1C8 4930509E16Rik-201ENSMUST00000181405 1191 ntTSL 1 (best) BASIC5□□□□□ -1.61
Vps28Q9D1C8 Gm28129-201ENSMUST00000186273 537 ntTSL 5 BASIC5□□□□□ -1.61
Vps28Q9D1C8 2810429I04Rik-209ENSMUST00000188642 674 ntTSL 1 (best) BASIC5□□□□□ -1.61
Vps28Q9D1C8 Gm9775-201ENSMUST00000189402 331 ntBASIC5□□□□□ -1.61
Vps28Q9D1C8 Gm37815-201ENSMUST00000195665 411 ntTSL 5 BASIC5□□□□□ -1.61
Vps28Q9D1C8 Vmn1r-ps5-201ENSMUST00000202963 931 ntBASIC5□□□□□ -1.61
Vps28Q9D1C8 Gm44023-201ENSMUST00000203710 469 ntBASIC5□□□□□ -1.61
Vps28Q9D1C8 Gm44857-201ENSMUST00000208331 196 ntBASIC5□□□□□ -1.61
Vps28Q9D1C8 AC138284.2-201ENSMUST00000213982 567 ntBASIC5□□□□□ -1.61
Vps28Q9D1C8 AC151843.1-201ENSMUST00000215960 691 ntBASIC5□□□□□ -1.61
Vps28Q9D1C8 AC165092.2-201ENSMUST00000224681 368 ntBASIC5□□□□□ -1.61
Retrieved 100 of 76,532 protein–RNA pairs in 130.1 ms