Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 Vmn2r-ps51-201ENSMUST00000177271 2461 ntBASIC5.63□□□□□ -1.51
Ddx56Q9D0R4 Olfr1130-201ENSMUST00000213103 2643 ntAPPRIS P1 TSL 3 BASIC5.62□□□□□ -1.51
Ddx56Q9D0R4 Gm37400-201ENSMUST00000193148 3605 ntBASIC5.62□□□□□ -1.51
Ddx56Q9D0R4 1700022I11Rik-201ENSMUST00000030163 3727 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Ddx56Q9D0R4 Creb5-203ENSMUST00000203528 7917 ntAPPRIS P2 TSL 5 BASIC5.62□□□□□ -1.51
Ddx56Q9D0R4 Olfr2-206ENSMUST00000216375 5828 ntAPPRIS P1 TSL 3 BASIC5.62□□□□□ -1.51
Ddx56Q9D0R4 Gm38299-201ENSMUST00000193214 3789 ntBASIC5.62□□□□□ -1.51
Ddx56Q9D0R4 Gm6134-201ENSMUST00000117265 171 ntBASIC5.62□□□□□ -1.51
Ddx56Q9D0R4 Gm14142-201ENSMUST00000117833 296 ntBASIC5.62□□□□□ -1.51
Ddx56Q9D0R4 Gm13579-201ENSMUST00000118519 517 ntBASIC5.62□□□□□ -1.51
Ddx56Q9D0R4 Gm11584-201ENSMUST00000120636 325 ntBASIC5.62□□□□□ -1.51
Ddx56Q9D0R4 Gm15267-201ENSMUST00000120888 464 ntBASIC5.62□□□□□ -1.51
Ddx56Q9D0R4 Gm15643-201ENSMUST00000126556 383 ntTSL 3 BASIC5.62□□□□□ -1.51
Ddx56Q9D0R4 Gm14223-201ENSMUST00000146060 517 ntTSL 3 BASIC5.62□□□□□ -1.51
Ddx56Q9D0R4 Rpl39-ps-202ENSMUST00000146505 151 ntBASIC5.62□□□□□ -1.51
Ddx56Q9D0R4 Gm11419-201ENSMUST00000150772 683 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Ddx56Q9D0R4 Gm24175-201ENSMUST00000158931 129 ntBASIC5.62□□□□□ -1.51
Ddx56Q9D0R4 Gm10087-201ENSMUST00000167650 330 ntBASIC5.62□□□□□ -1.51
Ddx56Q9D0R4 Vmn2r-ps127-201ENSMUST00000175850 1029 ntBASIC5.62□□□□□ -1.51
Ddx56Q9D0R4 AU023070-201ENSMUST00000176972 387 ntTSL 2 BASIC5.62□□□□□ -1.51
Ddx56Q9D0R4 Gm5849-201ENSMUST00000180151 351 ntAPPRIS P1 TSL 3 BASIC5.62□□□□□ -1.51
Ddx56Q9D0R4 Gm26683-201ENSMUST00000181737 470 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Ddx56Q9D0R4 Gm8614-201ENSMUST00000182528 978 ntBASIC5.62□□□□□ -1.51
Ddx56Q9D0R4 Gm27659-201ENSMUST00000183472 98 ntBASIC5.62□□□□□ -1.51
Ddx56Q9D0R4 Gm27602-201ENSMUST00000183861 111 ntBASIC5.62□□□□□ -1.51
Ddx56Q9D0R4 Gm28541-201ENSMUST00000185206 442 ntTSL 5 BASIC5.62□□□□□ -1.51
Ddx56Q9D0R4 Gm29191-201ENSMUST00000185427 621 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Ddx56Q9D0R4 Mrgprc1-ps-201ENSMUST00000185552 952 ntBASIC5.62□□□□□ -1.51
Ddx56Q9D0R4 Gm28486-201ENSMUST00000188443 621 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Ddx56Q9D0R4 Gm28550-201ENSMUST00000189125 618 ntTSL 5 BASIC5.62□□□□□ -1.51
Ddx56Q9D0R4 Gm28460-202ENSMUST00000190590 618 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Ddx56Q9D0R4 Gm28811-201ENSMUST00000190650 442 ntTSL 5 BASIC5.62□□□□□ -1.51
Ddx56Q9D0R4 Gm37808-201ENSMUST00000192038 442 ntTSL 5 BASIC5.62□□□□□ -1.51
Ddx56Q9D0R4 Gm37445-201ENSMUST00000195318 242 ntBASIC5.62□□□□□ -1.51
Ddx56Q9D0R4 Gm38008-201ENSMUST00000195333 518 ntBASIC5.62□□□□□ -1.51
Ddx56Q9D0R4 Gm43841-201ENSMUST00000199491 586 ntBASIC5.62□□□□□ -1.51
Ddx56Q9D0R4 Rho-205ENSMUST00000203877 939 ntTSL 2 BASIC5.62□□□□□ -1.51
Ddx56Q9D0R4 Gm44969-201ENSMUST00000207829 549 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Ddx56Q9D0R4 Gm45494-201ENSMUST00000211167 545 ntTSL 3 BASIC5.62□□□□□ -1.51
Ddx56Q9D0R4 Olfr856-ps1-201ENSMUST00000212177 948 ntBASIC5.62□□□□□ -1.51
Ddx56Q9D0R4 Gm18587-201ENSMUST00000213736 841 ntBASIC5.62□□□□□ -1.51
Ddx56Q9D0R4 AC123832.2-201ENSMUST00000215151 129 ntBASIC5.62□□□□□ -1.51
Ddx56Q9D0R4 AC134439.1-201ENSMUST00000220923 600 ntBASIC5.62□□□□□ -1.51
Ddx56Q9D0R4 AC140368.1-202ENSMUST00000226131 658 ntBASIC5.62□□□□□ -1.51
Ddx56Q9D0R4 AC113031.2-201ENSMUST00000226132 579 ntBASIC5.62□□□□□ -1.51
Ddx56Q9D0R4 AC121960.3-201ENSMUST00000227077 623 ntBASIC5.62□□□□□ -1.51
Ddx56Q9D0R4 AC154239.1-201ENSMUST00000228565 406 ntBASIC5.62□□□□□ -1.51
Ddx56Q9D0R4 4930447F04Rik-201ENSMUST00000033525 703 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Ddx56Q9D0R4 Olfr720-201ENSMUST00000035250 1023 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Ddx56Q9D0R4 Olfr1124-201ENSMUST00000062494 957 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Ddx56Q9D0R4 n-R5s160-201ENSMUST00000083096 120 ntBASIC5.62□□□□□ -1.51
Ddx56Q9D0R4 Olfr1297-201ENSMUST00000099612 939 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Ddx56Q9D0R4 Chl1-203ENSMUST00000203830 4152 ntAPPRIS P2 TSL 1 (best) BASIC5.62□□□□□ -1.51
Ddx56Q9D0R4 Ttc37-205ENSMUST00000224386 6976 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Ddx56Q9D0R4 Zfp967-202ENSMUST00000178443 1458 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
Ddx56Q9D0R4 Zfp969-203ENSMUST00000179061 1458 ntAPPRIS P1 TSL 3 BASIC5.62□□□□□ -1.51
Ddx56Q9D0R4 Gm28445-201ENSMUST00000187686 1498 ntTSL 5 BASIC5.62□□□□□ -1.51
Ddx56Q9D0R4 Ehf-201ENSMUST00000090475 4469 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Ddx56Q9D0R4 Pirb-201ENSMUST00000078451 3824 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Ddx56Q9D0R4 Gm38090-201ENSMUST00000195733 1942 ntBASIC5.62□□□□□ -1.51
Ddx56Q9D0R4 Rbm41-202ENSMUST00000087400 2229 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Ddx56Q9D0R4 Rmi1-204ENSMUST00000225815 2447 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Ddx56Q9D0R4 Vmn1r171-206ENSMUST00000227386 2570 ntAPPRIS ALT2 BASIC5.61□□□□□ -1.51
Ddx56Q9D0R4 Vmn1r171-208ENSMUST00000227866 2566 ntAPPRIS ALT2 BASIC5.61□□□□□ -1.51
Ddx56Q9D0R4 Slco1a5-201ENSMUST00000081380 2572 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Ddx56Q9D0R4 AC153969.1-201ENSMUST00000214047 2605 ntBASIC5.61□□□□□ -1.51
Ddx56Q9D0R4 Vmn2r85-201ENSMUST00000171811 3042 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Ddx56Q9D0R4 Hgf-204ENSMUST00000199581 3468 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Ddx56Q9D0R4 Flrt2-201ENSMUST00000057324 7099 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Ddx56Q9D0R4 Olfr1263-202ENSMUST00000214382 4400 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Ddx56Q9D0R4 Lpp-203ENSMUST00000115314 14854 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Ddx56Q9D0R4 Trav16d-dv11-201ENSMUST00000103606 353 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
Ddx56Q9D0R4 Mir669p-2-201ENSMUST00000103868 87 ntBASIC5.61□□□□□ -1.51
Ddx56Q9D0R4 Mir669p-1-201ENSMUST00000103884 87 ntBASIC5.61□□□□□ -1.51
Ddx56Q9D0R4 Gm24235-201ENSMUST00000104319 129 ntBASIC5.61□□□□□ -1.51
Ddx56Q9D0R4 Gm11008-201ENSMUST00000109032 622 ntTSL 5 BASIC5.61□□□□□ -1.51
Ddx56Q9D0R4 Mup-ps14-201ENSMUST00000118437 532 ntBASIC5.61□□□□□ -1.51
Ddx56Q9D0R4 Gm13785-201ENSMUST00000119099 690 ntBASIC5.61□□□□□ -1.51
Ddx56Q9D0R4 Mup-ps10-201ENSMUST00000119626 556 ntBASIC5.61□□□□□ -1.51
Ddx56Q9D0R4 Gm14925-201ENSMUST00000120611 438 ntBASIC5.61□□□□□ -1.51
Ddx56Q9D0R4 Gm13865-201ENSMUST00000120957 865 ntBASIC5.61□□□□□ -1.51
Ddx56Q9D0R4 Xlr4e-ps-201ENSMUST00000122102 648 ntBASIC5.61□□□□□ -1.51
Ddx56Q9D0R4 Gm12701-201ENSMUST00000134206 659 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Ddx56Q9D0R4 Gm13599-201ENSMUST00000134476 678 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Ddx56Q9D0R4 Gm11659-201ENSMUST00000137561 466 ntTSL 3 BASIC5.61□□□□□ -1.51
Ddx56Q9D0R4 Sspnos-201ENSMUST00000139089 826 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Ddx56Q9D0R4 Crem-235ENSMUST00000154705 529 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Ddx56Q9D0R4 Gm26489-201ENSMUST00000157880 264 ntBASIC5.61□□□□□ -1.51
Ddx56Q9D0R4 Skint1-204ENSMUST00000162158 1260 ntAPPRIS P2 TSL 1 (best) BASIC5.61□□□□□ -1.51
Ddx56Q9D0R4 Scgb1b20-201ENSMUST00000166714 421 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
Ddx56Q9D0R4 Gm6395-201ENSMUST00000167639 691 ntBASIC5.61□□□□□ -1.51
Ddx56Q9D0R4 Gm18416-201ENSMUST00000175635 1003 ntBASIC5.61□□□□□ -1.51
Ddx56Q9D0R4 Mir6417-201ENSMUST00000183815 116 ntBASIC5.61□□□□□ -1.51
Ddx56Q9D0R4 Gm18852-201ENSMUST00000184149 3593 ntBASIC5.61□□□□□ -1.51
Ddx56Q9D0R4 Gm38260-201ENSMUST00000193573 3995 ntBASIC5.61□□□□□ -1.51
Ddx56Q9D0R4 Gm37930-201ENSMUST00000194308 1886 ntBASIC5.61□□□□□ -1.51
Ddx56Q9D0R4 Gm37551-201ENSMUST00000195556 2861 ntBASIC5.61□□□□□ -1.51
Ddx56Q9D0R4 Gm44282-201ENSMUST00000203199 190 ntBASIC5.61□□□□□ -1.51
Ddx56Q9D0R4 Gm44708-201ENSMUST00000205580 2237 ntBASIC5.61□□□□□ -1.51
Ddx56Q9D0R4 4930533N22Rik-202ENSMUST00000206684 1503 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 76.3 ms