Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Olfr725-201ENSMUST00000089844 1110 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
Smc1aQ9CU62 Clca4c-ps-201ENSMUST00000098551 712 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Smc1aQ9CU62 Olfr655-204ENSMUST00000216750 2010 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
Smc1aQ9CU62 Gm43843-201ENSMUST00000202396 1587 ntBASIC5.24□□□□□ -1.57
Smc1aQ9CU62 Ifit2-201ENSMUST00000102826 3818 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Smc1aQ9CU62 Fus-202ENSMUST00000079045 2623 ntBASIC5.24□□□□□ -1.57
Smc1aQ9CU62 Gm43605-201ENSMUST00000199663 3426 ntBASIC5.23□□□□□ -1.57
Smc1aQ9CU62 Gm37461-201ENSMUST00000193929 3704 ntBASIC5.23□□□□□ -1.57
Smc1aQ9CU62 Olfr397-202ENSMUST00000213134 4048 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
Smc1aQ9CU62 Gm33680-202ENSMUST00000219411 3401 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Smc1aQ9CU62 Gm14221-201ENSMUST00000109473 340 ntTSL 3 BASIC5.23□□□□□ -1.57
Smc1aQ9CU62 Gm14388-201ENSMUST00000118119 477 ntBASIC5.23□□□□□ -1.57
Smc1aQ9CU62 Olfr1149-ps1-201ENSMUST00000118232 691 ntBASIC5.23□□□□□ -1.57
Smc1aQ9CU62 Gm13902-201ENSMUST00000120168 605 ntBASIC5.23□□□□□ -1.57
Smc1aQ9CU62 Gm13000-201ENSMUST00000120937 496 ntBASIC5.23□□□□□ -1.57
Smc1aQ9CU62 AI662270-201ENSMUST00000142709 304 ntTSL 2 BASIC5.23□□□□□ -1.57
Smc1aQ9CU62 Gm12707-201ENSMUST00000155789 489 ntTSL 3 BASIC5.23□□□□□ -1.57
Smc1aQ9CU62 Gm23046-201ENSMUST00000158369 284 ntBASIC5.23□□□□□ -1.57
Smc1aQ9CU62 Gm17103-201ENSMUST00000168897 549 ntTSL 3 BASIC5.23□□□□□ -1.57
Smc1aQ9CU62 Vmn1r-ps75-201ENSMUST00000174316 920 ntBASIC5.23□□□□□ -1.57
Smc1aQ9CU62 Gm16456-201ENSMUST00000174431 920 ntBASIC5.23□□□□□ -1.57
Smc1aQ9CU62 Vmn2r-ps121-201ENSMUST00000176230 802 ntBASIC5.23□□□□□ -1.57
Smc1aQ9CU62 Obox3-ps8-201ENSMUST00000177182 960 ntBASIC5.23□□□□□ -1.57
Smc1aQ9CU62 Gm5777-201ENSMUST00000177265 448 ntBASIC5.23□□□□□ -1.57
Smc1aQ9CU62 Gm21698-201ENSMUST00000178487 666 ntTSL 5 BASIC5.23□□□□□ -1.57
Smc1aQ9CU62 Gm27036-201ENSMUST00000182465 980 ntBASIC5.23□□□□□ -1.57
Smc1aQ9CU62 Gm28129-201ENSMUST00000186273 537 ntTSL 5 BASIC5.23□□□□□ -1.57
Smc1aQ9CU62 Gm28097-201ENSMUST00000187333 366 ntBASIC5.23□□□□□ -1.57
Smc1aQ9CU62 Gm9569-201ENSMUST00000187492 787 ntBASIC5.23□□□□□ -1.57
Smc1aQ9CU62 Gm8599-201ENSMUST00000193033 457 ntBASIC5.23□□□□□ -1.57
Smc1aQ9CU62 Gm10292-202ENSMUST00000193165 585 ntBASIC5.23□□□□□ -1.57
Smc1aQ9CU62 Gm33093-201ENSMUST00000197751 790 ntTSL 5 BASIC5.23□□□□□ -1.57
Smc1aQ9CU62 AC160635.2-201ENSMUST00000216368 734 ntTSL 5 BASIC5.23□□□□□ -1.57
Smc1aQ9CU62 AC158807.1-201ENSMUST00000217959 187 ntBASIC5.23□□□□□ -1.57
Smc1aQ9CU62 Gm33958-201ENSMUST00000222879 450 ntTSL 5 BASIC5.23□□□□□ -1.57
Smc1aQ9CU62 AC161269.1-201ENSMUST00000228426 318 ntBASIC5.23□□□□□ -1.57
Smc1aQ9CU62 Mir504-201ENSMUST00000093602 79 ntBASIC5.23□□□□□ -1.57
Smc1aQ9CU62 Nfyc-202ENSMUST00000097906 1008 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Smc1aQ9CU62 Gnpnat1-206ENSMUST00000227468 1490 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
Smc1aQ9CU62 Olfr1104-203ENSMUST00000215972 2797 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
Smc1aQ9CU62 Ceacam3-201ENSMUST00000108491 3261 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
Smc1aQ9CU62 Trpc5os-201ENSMUST00000155206 3585 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Smc1aQ9CU62 Gm17131-201ENSMUST00000164420 3846 ntBASIC5.23□□□□□ -1.57
Smc1aQ9CU62 Gm2123-201ENSMUST00000221476 2836 ntBASIC5.23□□□□□ -1.57
Smc1aQ9CU62 Tsga10-203ENSMUST00000114902 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
Smc1aQ9CU62 Nxt2-202ENSMUST00000112913 2538 ntTSL 3 BASIC5.23□□□□□ -1.57
Smc1aQ9CU62 Olfr1223-201ENSMUST00000217342 2333 ntAPPRIS P1 TSL 2 BASIC5.23□□□□□ -1.57
Smc1aQ9CU62 Gm42615-201ENSMUST00000197704 1820 ntBASIC5.23□□□□□ -1.57
Smc1aQ9CU62 Olfr1026-202ENSMUST00000217615 1538 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
Smc1aQ9CU62 Vmn1r200-202ENSMUST00000226157 5505 ntAPPRIS P2 BASIC5.22□□□□□ -1.57
Smc1aQ9CU62 Zfp287-201ENSMUST00000005399 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
Smc1aQ9CU62 6720489N17Rik-202ENSMUST00000201563 2640 ntAPPRIS P2 TSL 1 (best) BASIC5.22□□□□□ -1.57
Smc1aQ9CU62 Kif20b-201ENSMUST00000087341 5564 ntAPPRIS P2 TSL 5 BASIC5.22□□□□□ -1.57
Smc1aQ9CU62 6720464F23Rik-201ENSMUST00000193946 3496 ntBASIC5.22□□□□□ -1.57
Smc1aQ9CU62 Gm42986-201ENSMUST00000201618 3385 ntBASIC5.22□□□□□ -1.57
Smc1aQ9CU62 Gm16082-201ENSMUST00000115992 377 ntBASIC5.22□□□□□ -1.57
Smc1aQ9CU62 Gm12112-201ENSMUST00000117772 231 ntBASIC5.22□□□□□ -1.57
Smc1aQ9CU62 Cyp2j7-ps3-201ENSMUST00000121405 206 ntBASIC5.22□□□□□ -1.57
Smc1aQ9CU62 Olfr1003-ps1-201ENSMUST00000122238 717 ntBASIC5.22□□□□□ -1.57
Smc1aQ9CU62 Gm24444-201ENSMUST00000157244 308 ntBASIC5.22□□□□□ -1.57
Smc1aQ9CU62 Gm23906-201ENSMUST00000157573 128 ntBASIC5.22□□□□□ -1.57
Smc1aQ9CU62 Gm17060-201ENSMUST00000172394 824 ntBASIC5.22□□□□□ -1.57
Smc1aQ9CU62 Gm20389-201ENSMUST00000174217 1006 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Smc1aQ9CU62 Vmn2r-ps124-201ENSMUST00000176236 903 ntBASIC5.22□□□□□ -1.57
Smc1aQ9CU62 Gm27690-201ENSMUST00000184596 126 ntBASIC5.22□□□□□ -1.57
Smc1aQ9CU62 Gm27286-201ENSMUST00000184934 179 ntBASIC5.22□□□□□ -1.57
Smc1aQ9CU62 Gm18426-201ENSMUST00000191874 973 ntBASIC5.22□□□□□ -1.57
Smc1aQ9CU62 Gm38334-201ENSMUST00000195060 313 ntBASIC5.22□□□□□ -1.57
Smc1aQ9CU62 Igkv3-12-1-201ENSMUST00000197093 351 ntBASIC5.22□□□□□ -1.57
Smc1aQ9CU62 Gm45498-201ENSMUST00000210346 283 ntBASIC5.22□□□□□ -1.57
Smc1aQ9CU62 Gm45269-201ENSMUST00000210359 282 ntBASIC5.22□□□□□ -1.57
Smc1aQ9CU62 Gm45651-201ENSMUST00000210857 335 ntBASIC5.22□□□□□ -1.57
Smc1aQ9CU62 Olfr856-ps1-201ENSMUST00000212177 948 ntBASIC5.22□□□□□ -1.57
Smc1aQ9CU62 Olfr1133-202ENSMUST00000217368 993 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
Smc1aQ9CU62 Serpinb3d-201ENSMUST00000023861 1216 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Smc1aQ9CU62 Macc1-201ENSMUST00000048880 3818 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
Smc1aQ9CU62 Olfr881-201ENSMUST00000074611 948 ntBASIC5.22□□□□□ -1.57
Smc1aQ9CU62 Olfr884-201ENSMUST00000077732 930 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
Smc1aQ9CU62 Olfr206-201ENSMUST00000084791 1005 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
Smc1aQ9CU62 AC149588.1-201ENSMUST00000228274 3745 ntBASIC5.22□□□□□ -1.57
Smc1aQ9CU62 Mmp1a-201ENSMUST00000034492 2022 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
Smc1aQ9CU62 Vmn2r-ps40-201ENSMUST00000174438 2558 ntBASIC5.22□□□□□ -1.57
Smc1aQ9CU62 Nxf2-203ENSMUST00000113189 2375 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
Smc1aQ9CU62 Olfr629-203ENSMUST00000216300 2277 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
Smc1aQ9CU62 Zc4h2-203ENSMUST00000120620 2156 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Smc1aQ9CU62 Vmn1r214-203ENSMUST00000227652 3906 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
Smc1aQ9CU62 Grik1-203ENSMUST00000114137 2894 ntTSL 5 BASIC5.22□□□□□ -1.57
Smc1aQ9CU62 Mbnl1-219ENSMUST00000194201 4319 ntTSL 5 BASIC5.21□□□□□ -1.57
Smc1aQ9CU62 Olfr753-ps1-201ENSMUST00000174025 3121 ntAPPRIS P1 TSL 3 BASIC5.21□□□□□ -1.57
Smc1aQ9CU62 Zfp759-201ENSMUST00000052716 3482 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
Smc1aQ9CU62 Elavl2-202ENSMUST00000102799 3840 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
Smc1aQ9CU62 Gm37588-201ENSMUST00000195024 2496 ntBASIC5.21□□□□□ -1.57
Smc1aQ9CU62 Mlip-205ENSMUST00000183955 3069 ntAPPRIS P5 TSL 5 BASIC5.21□□□□□ -1.58
Smc1aQ9CU62 Vmn1r184-202ENSMUST00000227230 7999 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
Smc1aQ9CU62 Prame-201ENSMUST00000033786 1395 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
Smc1aQ9CU62 Jchain-201ENSMUST00000087033 1393 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Smc1aQ9CU62 Olfr410-203ENSMUST00000214490 5075 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
Smc1aQ9CU62 Traj50-201ENSMUST00000103693 63 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
Smc1aQ9CU62 Gm3020-201ENSMUST00000112801 450 ntTSL 5 BASIC5.21□□□□□ -1.58
Smc1aQ9CU62 Olfr1035-ps1-201ENSMUST00000120109 966 ntBASIC5.21□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 88.7 ms