Protein–RNA interactions for Protein: Q9CQ56

Use1, Vesicle transport protein USE1, mousemouse

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Use1Q9CQ56 Gm43913-201ENSMUST00000203924 3029 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
Use1Q9CQ56 Gm42843-201ENSMUST00000196328 3616 ntBASIC4.28□□□□□ -1.72
Use1Q9CQ56 Gm11346-201ENSMUST00000118346 704 ntBASIC4.28□□□□□ -1.72
Use1Q9CQ56 Gm12231-201ENSMUST00000119447 695 ntBASIC4.28□□□□□ -1.72
Use1Q9CQ56 Gm14925-201ENSMUST00000120611 438 ntBASIC4.28□□□□□ -1.72
Use1Q9CQ56 2210408F21Rik-202ENSMUST00000124811 384 ntTSL 2 BASIC4.28□□□□□ -1.72
Use1Q9CQ56 Gm13209-201ENSMUST00000138492 494 ntTSL 5 BASIC4.28□□□□□ -1.72
Use1Q9CQ56 Gm23327-201ENSMUST00000157420 78 ntBASIC4.28□□□□□ -1.72
Use1Q9CQ56 Gm16545-201ENSMUST00000161968 463 ntBASIC4.28□□□□□ -1.72
Use1Q9CQ56 Gm3030-201ENSMUST00000163410 516 ntBASIC4.28□□□□□ -1.72
Use1Q9CQ56 Gm3339-201ENSMUST00000163462 475 ntBASIC4.28□□□□□ -1.72
Use1Q9CQ56 Gm7876-201ENSMUST00000169465 984 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
Use1Q9CQ56 Gm8265-201ENSMUST00000170469 475 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
Use1Q9CQ56 Gm6337-202ENSMUST00000170613 997 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
Use1Q9CQ56 Vmn1r139-202ENSMUST00000173668 753 ntTSL 3 BASIC4.28□□□□□ -1.72
Use1Q9CQ56 Gm22859-201ENSMUST00000174978 122 ntBASIC4.28□□□□□ -1.72
Use1Q9CQ56 Lipo1-202ENSMUST00000178735 1188 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
Use1Q9CQ56 4930509E16Rik-201ENSMUST00000181405 1191 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
Use1Q9CQ56 Nabp1-207ENSMUST00000188204 972 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
Use1Q9CQ56 Gm37934-201ENSMUST00000192902 402 ntBASIC4.28□□□□□ -1.72
Use1Q9CQ56 Gm37815-201ENSMUST00000195665 411 ntTSL 5 BASIC4.28□□□□□ -1.72
Use1Q9CQ56 Cycs-ps2-201ENSMUST00000197114 292 ntBASIC4.28□□□□□ -1.72
Use1Q9CQ56 AC120011.1-201ENSMUST00000202147 744 ntBASIC4.28□□□□□ -1.72
Use1Q9CQ56 Gm5886-201ENSMUST00000203420 641 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
Use1Q9CQ56 Gm44389-201ENSMUST00000203795 182 ntBASIC4.28□□□□□ -1.72
Use1Q9CQ56 Gm44234-201ENSMUST00000204246 900 ntBASIC4.28□□□□□ -1.72
Use1Q9CQ56 Gm38843-201ENSMUST00000209189 323 ntTSL 5 BASIC4.28□□□□□ -1.72
Use1Q9CQ56 Gm45830-201ENSMUST00000212945 344 ntTSL 5 BASIC4.28□□□□□ -1.72
Use1Q9CQ56 Gm29154-234ENSMUST00000215272 750 ntTSL 5 BASIC4.28□□□□□ -1.72
Use1Q9CQ56 Olfr228-201ENSMUST00000216534 942 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
Use1Q9CQ56 Gm34609-201ENSMUST00000219284 789 ntTSL 5 BASIC4.28□□□□□ -1.72
Use1Q9CQ56 AC131117.2-203ENSMUST00000225886 950 ntBASIC4.28□□□□□ -1.72
Use1Q9CQ56 AC154335.2-201ENSMUST00000225916 638 ntBASIC4.28□□□□□ -1.72
Use1Q9CQ56 Olfr1206-201ENSMUST00000077302 924 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
Use1Q9CQ56 Wfdc17-201ENSMUST00000092836 533 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Use1Q9CQ56 Olfr894-201ENSMUST00000093866 949 ntAPPRIS P2 BASIC4.28□□□□□ -1.72
Use1Q9CQ56 Ncr1-202ENSMUST00000126417 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
Use1Q9CQ56 Pkhd1l1-203ENSMUST00000209244 12949 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
Use1Q9CQ56 Rgs21-202ENSMUST00000184189 1674 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
Use1Q9CQ56 Kcnj1-201ENSMUST00000047334 2987 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Use1Q9CQ56 Gm43662-201ENSMUST00000198310 2271 ntBASIC4.28□□□□□ -1.72
Use1Q9CQ56 Usp15-211ENSMUST00000220377 11525 ntAPPRIS P2 TSL 1 (best) BASIC4.28□□□□□ -1.72
Use1Q9CQ56 Gm3665-201ENSMUST00000177214 2461 ntBASIC4.28□□□□□ -1.72
Use1Q9CQ56 Vmn2r-ps51-201ENSMUST00000177271 2461 ntBASIC4.28□□□□□ -1.72
Use1Q9CQ56 Olfr822-202ENSMUST00000216879 2663 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.73
Use1Q9CQ56 Gm13757-201ENSMUST00000126038 4460 ntAPPRIS P1 TSL 3 BASIC4.27□□□□□ -1.73
Use1Q9CQ56 Olfr741-202ENSMUST00000205518 3406 ntAPPRIS P1 TSL 2 BASIC4.27□□□□□ -1.73
Use1Q9CQ56 Hbp1-204ENSMUST00000175686 1315 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Use1Q9CQ56 Gm33594-201ENSMUST00000209502 1333 ntTSL 5 BASIC4.27□□□□□ -1.73
Use1Q9CQ56 4921515E04Rik-202ENSMUST00000226383 1738 ntBASIC4.27□□□□□ -1.73
Use1Q9CQ56 Ptgs2os-202ENSMUST00000181915 2937 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Use1Q9CQ56 Gm37696-201ENSMUST00000194223 3349 ntBASIC4.27□□□□□ -1.73
Use1Q9CQ56 Olfr955-203ENSMUST00000220176 1452 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Use1Q9CQ56 Gm13386-201ENSMUST00000117677 124 ntBASIC4.27□□□□□ -1.73
Use1Q9CQ56 Ube2v2-204ENSMUST00000118236 893 ntTSL 5 BASIC4.27□□□□□ -1.73
Use1Q9CQ56 Gm7189-201ENSMUST00000119811 429 ntBASIC4.27□□□□□ -1.73
Use1Q9CQ56 Gm13470-201ENSMUST00000123911 421 ntTSL 2 BASIC4.27□□□□□ -1.73
Use1Q9CQ56 Gm16347-201ENSMUST00000131707 622 ntTSL 2 BASIC4.27□□□□□ -1.73
Use1Q9CQ56 Rap1gapos-201ENSMUST00000135358 471 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Use1Q9CQ56 Gm25433-201ENSMUST00000158283 286 ntBASIC4.27□□□□□ -1.73
Use1Q9CQ56 1700058P15Rik-201ENSMUST00000159981 413 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Use1Q9CQ56 Has2os-203ENSMUST00000165880 638 ntTSL 2 BASIC4.27□□□□□ -1.73
Use1Q9CQ56 Gm9027-201ENSMUST00000165914 661 ntBASIC4.27□□□□□ -1.73
Use1Q9CQ56 Vmn1r152-201ENSMUST00000168326 924 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Use1Q9CQ56 Vmn1r104-201ENSMUST00000169689 924 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Use1Q9CQ56 Gm3453-202ENSMUST00000178308 618 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
Use1Q9CQ56 Gm3127-203ENSMUST00000178386 618 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
Use1Q9CQ56 Gm3187-201ENSMUST00000178429 618 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
Use1Q9CQ56 Gm3685-202ENSMUST00000179199 618 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
Use1Q9CQ56 1700027I24Rik-201ENSMUST00000183612 696 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Use1Q9CQ56 Gm27976-201ENSMUST00000183635 162 ntBASIC4.27□□□□□ -1.73
Use1Q9CQ56 1700128A07Rik-201ENSMUST00000186311 860 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Use1Q9CQ56 Skint2-204ENSMUST00000186969 1258 ntAPPRIS P2 TSL 1 (best) BASIC4.27□□□□□ -1.73
Use1Q9CQ56 Gm17981-201ENSMUST00000191109 739 ntBASIC4.27□□□□□ -1.73
Use1Q9CQ56 Gm43350-201ENSMUST00000196382 711 ntBASIC4.27□□□□□ -1.73
Use1Q9CQ56 Gm33093-201ENSMUST00000197751 790 ntTSL 5 BASIC4.27□□□□□ -1.73
Use1Q9CQ56 Mir142-201ENSMUST00000198092 64 ntBASIC4.27□□□□□ -1.73
Use1Q9CQ56 Gm32308-201ENSMUST00000203053 280 ntBASIC4.27□□□□□ -1.73
Use1Q9CQ56 Gm2691-201ENSMUST00000203205 901 ntBASIC4.27□□□□□ -1.73
Use1Q9CQ56 Gm43945-201ENSMUST00000203595 754 ntBASIC4.27□□□□□ -1.73
Use1Q9CQ56 Gm5995-201ENSMUST00000204107 1273 ntBASIC4.27□□□□□ -1.73
Use1Q9CQ56 Gm36371-201ENSMUST00000209043 1103 ntBASIC4.27□□□□□ -1.73
Use1Q9CQ56 Gm44515-201ENSMUST00000209045 379 ntTSL 5 BASIC4.27□□□□□ -1.73
Use1Q9CQ56 Gm18258-201ENSMUST00000210413 542 ntBASIC4.27□□□□□ -1.73
Use1Q9CQ56 4930503L19Rik-202ENSMUST00000211817 913 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Use1Q9CQ56 Olfr603-202ENSMUST00000218246 1021 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Use1Q9CQ56 Gm40692-201ENSMUST00000220411 491 ntBASIC4.27□□□□□ -1.73
Use1Q9CQ56 AC174776.1-201ENSMUST00000221509 405 ntBASIC4.27□□□□□ -1.73
Use1Q9CQ56 Gm40658-202ENSMUST00000221900 701 ntTSL 5 BASIC4.27□□□□□ -1.73
Use1Q9CQ56 AC174776.2-201ENSMUST00000222561 405 ntBASIC4.27□□□□□ -1.73
Use1Q9CQ56 AC154838.2-201ENSMUST00000226602 747 ntBASIC4.27□□□□□ -1.73
Use1Q9CQ56 Olfr603-201ENSMUST00000071844 939 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Use1Q9CQ56 Gm28362-201ENSMUST00000189430 2420 ntBASIC4.27□□□□□ -1.73
Use1Q9CQ56 Olfr655-203ENSMUST00000215538 2012 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Use1Q9CQ56 Olfr655-204ENSMUST00000216750 2010 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Use1Q9CQ56 Nlrp4e-201ENSMUST00000076470 3382 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Use1Q9CQ56 Gm37899-201ENSMUST00000193116 8717 ntBASIC4.27□□□□□ -1.73
Use1Q9CQ56 Olfr172-202ENSMUST00000214139 1778 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Use1Q9CQ56 Cast-208ENSMUST00000223033 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
Use1Q9CQ56 Gm43844-201ENSMUST00000202926 5605 ntBASIC4.27□□□□□ -1.73
Retrieved 100 of 76,532 protein–RNA pairs in 101.9 ms