Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Gm23068-201ENSMUST00000158239 293 ntBASIC6.63□□□□□ -1.35
Trim11Q99PQ2 Gm15970-201ENSMUST00000160623 834 ntBASIC6.63□□□□□ -1.35
Trim11Q99PQ2 Gm22650-201ENSMUST00000175138 105 ntBASIC6.63□□□□□ -1.35
Trim11Q99PQ2 Vmn2r-ps10-201ENSMUST00000176836 898 ntBASIC6.63□□□□□ -1.35
Trim11Q99PQ2 Pkib-211ENSMUST00000177473 525 ntAPPRIS P1 TSL 3 BASIC6.63□□□□□ -1.35
Trim11Q99PQ2 Gm28086-201ENSMUST00000191586 317 ntTSL 5 BASIC6.63□□□□□ -1.35
Trim11Q99PQ2 Gm37854-201ENSMUST00000192149 1463 ntTSL 5 BASIC6.63□□□□□ -1.35
Trim11Q99PQ2 Gm43369-201ENSMUST00000196373 1552 ntBASIC6.63□□□□□ -1.35
Trim11Q99PQ2 Gm44221-201ENSMUST00000203552 388 ntBASIC6.63□□□□□ -1.35
Trim11Q99PQ2 Gm44149-201ENSMUST00000204256 226 ntBASIC6.63□□□□□ -1.35
Trim11Q99PQ2 Olfr821-202ENSMUST00000205181 1993 ntAPPRIS P1 TSL 2 BASIC6.63□□□□□ -1.35
Trim11Q99PQ2 Olfr515-ps1-201ENSMUST00000208389 189 ntBASIC6.63□□□□□ -1.35
Trim11Q99PQ2 Gm45387-201ENSMUST00000209792 632 ntBASIC6.63□□□□□ -1.35
Trim11Q99PQ2 Gm8748-201ENSMUST00000211125 587 ntBASIC6.63□□□□□ -1.35
Trim11Q99PQ2 Olfr293-202ENSMUST00000214401 2852 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
Trim11Q99PQ2 AC154296.2-201ENSMUST00000214696 545 ntBASIC6.63□□□□□ -1.35
Trim11Q99PQ2 CAAA01125382.4-201ENSMUST00000217222 774 ntBASIC6.63□□□□□ -1.35
Trim11Q99PQ2 Olfr1094-202ENSMUST00000217509 1693 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
Trim11Q99PQ2 Gm6125-201ENSMUST00000217983 3472 ntBASIC6.63□□□□□ -1.35
Trim11Q99PQ2 Gm7530-201ENSMUST00000218466 605 ntBASIC6.63□□□□□ -1.35
Trim11Q99PQ2 AC159297.1-201ENSMUST00000218689 290 ntBASIC6.63□□□□□ -1.35
Trim11Q99PQ2 Mdga2-211ENSMUST00000222623 1449 ntTSL 5 BASIC6.63□□□□□ -1.35
Trim11Q99PQ2 Gm34639-201ENSMUST00000222648 2241 ntTSL 5 BASIC6.63□□□□□ -1.35
Trim11Q99PQ2 AC155167.2-201ENSMUST00000226127 1945 ntBASIC6.63□□□□□ -1.35
Trim11Q99PQ2 CT009556.1-201ENSMUST00000227282 449 ntBASIC6.63□□□□□ -1.35
Trim11Q99PQ2 Ythdc1-201ENSMUST00000038384 2960 ntAPPRIS P3 TSL 5 BASIC6.63□□□□□ -1.35
Trim11Q99PQ2 Pmch-201ENSMUST00000048621 749 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Trim11Q99PQ2 Daw1-202ENSMUST00000065436 1349 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Trim11Q99PQ2 Olfr726-201ENSMUST00000072370 966 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
Trim11Q99PQ2 Zfp605-201ENSMUST00000086686 2085 ntAPPRIS P1 TSL 3 BASIC6.63□□□□□ -1.35
Trim11Q99PQ2 Olfr78-204ENSMUST00000217123 4695 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Trim11Q99PQ2 Zpld1-201ENSMUST00000036412 2589 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Trim11Q99PQ2 Slc7a2-203ENSMUST00000117077 7626 ntAPPRIS ALT1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Trim11Q99PQ2 Cts8-201ENSMUST00000021891 2505 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Trim11Q99PQ2 Pign-206ENSMUST00000187537 4006 ntTSL 5 BASIC6.62□□□□□ -1.35
Trim11Q99PQ2 Hdlbp-204ENSMUST00000186164 3808 ntTSL 5 BASIC6.62□□□□□ -1.35
Trim11Q99PQ2 Zmynd11-201ENSMUST00000062658 3796 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Trim11Q99PQ2 Homer2-202ENSMUST00000098326 10982 ntTSL 5 BASIC6.62□□□□□ -1.35
Trim11Q99PQ2 Naip5-201ENSMUST00000049789 5204 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Trim11Q99PQ2 Olfr447-202ENSMUST00000216408 3185 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
Trim11Q99PQ2 Gm336-201ENSMUST00000186376 1480 ntBASIC6.62□□□□□ -1.35
Trim11Q99PQ2 Gm42397-205ENSMUST00000208692 1449 ntTSL 5 BASIC6.62□□□□□ -1.35
Trim11Q99PQ2 A230103L15Rik-201ENSMUST00000207198 3872 ntBASIC6.62□□□□□ -1.35
Trim11Q99PQ2 G930045G22Rik-201ENSMUST00000101402 480 ntTSL 5 BASIC6.62□□□□□ -1.35
Trim11Q99PQ2 Gm23311-201ENSMUST00000104152 134 ntBASIC6.62□□□□□ -1.35
Trim11Q99PQ2 Magea6-202ENSMUST00000112562 1212 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
Trim11Q99PQ2 Gm13503-201ENSMUST00000119017 446 ntBASIC6.62□□□□□ -1.35
Trim11Q99PQ2 Gm14115-201ENSMUST00000119242 482 ntBASIC6.62□□□□□ -1.35
Trim11Q99PQ2 Gm12638-201ENSMUST00000119531 298 ntBASIC6.62□□□□□ -1.35
Trim11Q99PQ2 Gm14269-201ENSMUST00000120455 306 ntBASIC6.62□□□□□ -1.35
Trim11Q99PQ2 Gm6446-201ENSMUST00000120604 818 ntBASIC6.62□□□□□ -1.35
Trim11Q99PQ2 Gm12890-201ENSMUST00000120885 373 ntBASIC6.62□□□□□ -1.35
Trim11Q99PQ2 Vmn1r-ps116-201ENSMUST00000121544 292 ntBASIC6.62□□□□□ -1.35
Trim11Q99PQ2 Olfr349-ps1-201ENSMUST00000121879 609 ntBASIC6.62□□□□□ -1.35
Trim11Q99PQ2 Gm11965-201ENSMUST00000122017 277 ntBASIC6.62□□□□□ -1.35
Trim11Q99PQ2 Gm12343-201ENSMUST00000138817 414 ntTSL 3 BASIC6.62□□□□□ -1.35
Trim11Q99PQ2 Gm14742-201ENSMUST00000148284 381 ntTSL 3 BASIC6.62□□□□□ -1.35
Trim11Q99PQ2 Ap3m1-ps-201ENSMUST00000177652 1258 ntBASIC6.62□□□□□ -1.35
Trim11Q99PQ2 Gm17048-201ENSMUST00000179266 847 ntBASIC6.62□□□□□ -1.35
Trim11Q99PQ2 Gm7952-201ENSMUST00000180540 984 ntBASIC6.62□□□□□ -1.35
Trim11Q99PQ2 D630011A20Rik-201ENSMUST00000180858 500 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Trim11Q99PQ2 Gm26863-201ENSMUST00000181144 624 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Trim11Q99PQ2 Gm19261-201ENSMUST00000189628 539 ntTSL 2 BASIC6.62□□□□□ -1.35
Trim11Q99PQ2 Ighv1-10-201ENSMUST00000194372 355 ntBASIC6.62□□□□□ -1.35
Trim11Q99PQ2 Nras-ps2-201ENSMUST00000195269 178 ntBASIC6.62□□□□□ -1.35
Trim11Q99PQ2 Gm37095-201ENSMUST00000195421 205 ntBASIC6.62□□□□□ -1.35
Trim11Q99PQ2 Gm21006-201ENSMUST00000196930 667 ntBASIC6.62□□□□□ -1.35
Trim11Q99PQ2 Gm18327-201ENSMUST00000202426 830 ntBASIC6.62□□□□□ -1.35
Trim11Q99PQ2 Olfr1430-ps1-201ENSMUST00000207422 917 ntBASIC6.62□□□□□ -1.35
Trim11Q99PQ2 Gm45157-201ENSMUST00000208729 401 ntBASIC6.62□□□□□ -1.35
Trim11Q99PQ2 Gm45508-201ENSMUST00000209298 299 ntBASIC6.62□□□□□ -1.35
Trim11Q99PQ2 Gm45368-201ENSMUST00000209323 703 ntTSL 5 BASIC6.62□□□□□ -1.35
Trim11Q99PQ2 Gm45366-201ENSMUST00000209828 384 ntBASIC6.62□□□□□ -1.35
Trim11Q99PQ2 C230072F16Rik-203ENSMUST00000220322 1136 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Trim11Q99PQ2 Gm36372-201ENSMUST00000221011 778 ntTSL 5 BASIC6.62□□□□□ -1.35
Trim11Q99PQ2 AC138718.1-201ENSMUST00000225947 1009 ntBASIC6.62□□□□□ -1.35
Trim11Q99PQ2 AC137871.2-201ENSMUST00000226482 289 ntBASIC6.62□□□□□ -1.35
Trim11Q99PQ2 AC155314.1-201ENSMUST00000227624 508 ntBASIC6.62□□□□□ -1.35
Trim11Q99PQ2 Gm12582-201ENSMUST00000030555 697 ntBASIC6.62□□□□□ -1.35
Trim11Q99PQ2 Olfr161-201ENSMUST00000061541 942 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
Trim11Q99PQ2 Gm10061-201ENSMUST00000073111 465 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
Trim11Q99PQ2 Olfr532-201ENSMUST00000073226 930 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
Trim11Q99PQ2 Magea6-201ENSMUST00000076986 1201 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Trim11Q99PQ2 Olfr376-201ENSMUST00000078952 1210 ntAPPRIS ALT2 TSL 2 BASIC6.62□□□□□ -1.35
Trim11Q99PQ2 Ssxb3-202ENSMUST00000089379 604 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Trim11Q99PQ2 Rps19-ps4-201ENSMUST00000091925 438 ntBASIC6.62□□□□□ -1.35
Trim11Q99PQ2 Klhl4-202ENSMUST00000113371 3566 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
Trim11Q99PQ2 Klhl4-201ENSMUST00000040504 3584 ntAPPRIS P3 TSL 1 (best) BASIC6.62□□□□□ -1.35
Trim11Q99PQ2 Gng12-201ENSMUST00000043148 4248 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Trim11Q99PQ2 March1-205ENSMUST00000110255 4177 ntAPPRIS P3 TSL 1 (best) BASIC6.62□□□□□ -1.35
Trim11Q99PQ2 Gm30292-201ENSMUST00000194198 3000 ntTSL 3 BASIC6.62□□□□□ -1.35
Trim11Q99PQ2 Fignl1-202ENSMUST00000109664 2807 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Trim11Q99PQ2 Pkn2-206ENSMUST00000173830 2808 ntTSL 5 BASIC6.62□□□□□ -1.35
Trim11Q99PQ2 Cntn1-201ENSMUST00000000109 5646 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Trim11Q99PQ2 Gm19035-201ENSMUST00000193299 1742 ntBASIC6.62□□□□□ -1.35
Trim11Q99PQ2 Vmn2r-ps130-201ENSMUST00000175853 2568 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
Trim11Q99PQ2 Vmn2r-ps129-201ENSMUST00000177509 2568 ntBASIC6.62□□□□□ -1.35
Trim11Q99PQ2 1700017N19Rik-201ENSMUST00000041162 1691 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Trim11Q99PQ2 Gm16270-201ENSMUST00000160327 3238 ntBASIC6.61□□□□□ -1.35
Trim11Q99PQ2 Gm32122-201ENSMUST00000212119 2259 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Retrieved 100 of 76,532 protein–RNA pairs in 84.4 ms