Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 Pot1a-203ENSMUST00000115330 3151 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Trim8Q99PJ2 Olfr1261-204ENSMUST00000216953 3176 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Trim8Q99PJ2 Nlrp4a-201ENSMUST00000068767 4259 ntAPPRIS P2 TSL 1 (best) BASIC5.41□□□□□ -1.54
Trim8Q99PJ2 4732496C06Rik-201ENSMUST00000206533 2500 ntBASIC5.41□□□□□ -1.54
Trim8Q99PJ2 Usp26-202ENSMUST00000114869 4133 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Trim8Q99PJ2 Gm37226-201ENSMUST00000191644 3255 ntBASIC5.41□□□□□ -1.54
Trim8Q99PJ2 Mir582-201ENSMUST00000103758 81 ntBASIC5.41□□□□□ -1.54
Trim8Q99PJ2 Gm12077-201ENSMUST00000117049 364 ntBASIC5.41□□□□□ -1.54
Trim8Q99PJ2 Gm13733-201ENSMUST00000117290 535 ntBASIC5.41□□□□□ -1.54
Trim8Q99PJ2 Rpl38-ps1-201ENSMUST00000117723 215 ntBASIC5.41□□□□□ -1.54
Trim8Q99PJ2 Hspe1-ps5-201ENSMUST00000118080 297 ntBASIC5.41□□□□□ -1.54
Trim8Q99PJ2 Cabyr-203ENSMUST00000119108 818 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
Trim8Q99PJ2 Gm7079-201ENSMUST00000119726 171 ntBASIC5.41□□□□□ -1.54
Trim8Q99PJ2 Gm16423-201ENSMUST00000120078 947 ntBASIC5.41□□□□□ -1.54
Trim8Q99PJ2 Atp5l2-ps-201ENSMUST00000120130 312 ntBASIC5.41□□□□□ -1.54
Trim8Q99PJ2 Gm14620-201ENSMUST00000120656 383 ntBASIC5.41□□□□□ -1.54
Trim8Q99PJ2 Gm14979-201ENSMUST00000121561 1035 ntBASIC5.41□□□□□ -1.54
Trim8Q99PJ2 Gm12110-201ENSMUST00000121601 579 ntBASIC5.41□□□□□ -1.54
Trim8Q99PJ2 Gm25806-201ENSMUST00000122782 122 ntBASIC5.41□□□□□ -1.54
Trim8Q99PJ2 Gm14808-201ENSMUST00000129259 361 ntTSL 3 BASIC5.41□□□□□ -1.54
Trim8Q99PJ2 8030443G20Rik-201ENSMUST00000140919 903 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Trim8Q99PJ2 G630016G05Rik-201ENSMUST00000152412 796 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Trim8Q99PJ2 Gm22518-201ENSMUST00000158267 68 ntBASIC5.41□□□□□ -1.54
Trim8Q99PJ2 Gm25439-201ENSMUST00000158280 131 ntBASIC5.41□□□□□ -1.54
Trim8Q99PJ2 R3hcc1l-202ENSMUST00000160107 950 ntAPPRIS ALT2 TSL 2 BASIC5.41□□□□□ -1.54
Trim8Q99PJ2 Fabp7-202ENSMUST00000165013 880 ntTSL 2 BASIC5.41□□□□□ -1.54
Trim8Q99PJ2 Vmn1r7-201ENSMUST00000176252 1219 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
Trim8Q99PJ2 Gm10251-201ENSMUST00000178788 384 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Trim8Q99PJ2 Gm21758-201ENSMUST00000179336 819 ntBASIC5.41□□□□□ -1.54
Trim8Q99PJ2 4933440J02Rik-201ENSMUST00000181547 1144 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Trim8Q99PJ2 1700064J06Rik-201ENSMUST00000187551 386 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Trim8Q99PJ2 Gm28597-201ENSMUST00000187664 666 ntBASIC5.41□□□□□ -1.54
Trim8Q99PJ2 Gm28881-201ENSMUST00000187710 470 ntTSL 3 BASIC5.41□□□□□ -1.54
Trim8Q99PJ2 Gm7266-201ENSMUST00000187999 405 ntBASIC5.41□□□□□ -1.54
Trim8Q99PJ2 Gm29639-201ENSMUST00000188375 580 ntBASIC5.41□□□□□ -1.54
Trim8Q99PJ2 Gm29647-201ENSMUST00000188795 666 ntBASIC5.41□□□□□ -1.54
Trim8Q99PJ2 Gm29133-201ENSMUST00000189155 885 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Trim8Q99PJ2 Gm9775-201ENSMUST00000189402 331 ntBASIC5.41□□□□□ -1.54
Trim8Q99PJ2 Gm28337-201ENSMUST00000190425 666 ntBASIC5.41□□□□□ -1.54
Trim8Q99PJ2 Gm28504-201ENSMUST00000190977 666 ntBASIC5.41□□□□□ -1.54
Trim8Q99PJ2 Gm31511-201ENSMUST00000193134 657 ntBASIC5.41□□□□□ -1.54
Trim8Q99PJ2 Gm35843-201ENSMUST00000193716 666 ntBASIC5.41□□□□□ -1.54
Trim8Q99PJ2 Gm18952-201ENSMUST00000194471 846 ntBASIC5.41□□□□□ -1.54
Trim8Q99PJ2 Gimd1-202ENSMUST00000196701 654 ntAPPRIS P1 TSL 3 BASIC5.41□□□□□ -1.54
Trim8Q99PJ2 Gm43619-201ENSMUST00000197267 914 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Trim8Q99PJ2 Gm44360-201ENSMUST00000200081 82 ntBASIC5.41□□□□□ -1.54
Trim8Q99PJ2 Rab5a-ps-201ENSMUST00000203252 653 ntBASIC5.41□□□□□ -1.54
Trim8Q99PJ2 Clec2f-202ENSMUST00000204981 657 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Trim8Q99PJ2 Rpl7a-ps14-201ENSMUST00000205097 790 ntBASIC5.41□□□□□ -1.54
Trim8Q99PJ2 Gm44571-201ENSMUST00000208092 533 ntBASIC5.41□□□□□ -1.54
Trim8Q99PJ2 Gm44516-201ENSMUST00000208794 833 ntTSL 5 BASIC5.41□□□□□ -1.54
Trim8Q99PJ2 Gm45870-201ENSMUST00000211269 601 ntBASIC5.41□□□□□ -1.54
Trim8Q99PJ2 AC138284.2-201ENSMUST00000213982 567 ntBASIC5.41□□□□□ -1.54
Trim8Q99PJ2 Olfr953-ps1-201ENSMUST00000214463 892 ntBASIC5.41□□□□□ -1.54
Trim8Q99PJ2 AC102369.1-201ENSMUST00000218415 373 ntBASIC5.41□□□□□ -1.54
Trim8Q99PJ2 AC112274.2-201ENSMUST00000218436 170 ntBASIC5.41□□□□□ -1.54
Trim8Q99PJ2 AC124445.1-201ENSMUST00000218613 452 ntBASIC5.41□□□□□ -1.54
Trim8Q99PJ2 AC159622.3-201ENSMUST00000221010 361 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Trim8Q99PJ2 AC114572.1-201ENSMUST00000227262 300 ntBASIC5.41□□□□□ -1.54
Trim8Q99PJ2 CT030238.4-203ENSMUST00000227343 836 ntBASIC5.41□□□□□ -1.54
Trim8Q99PJ2 Vmn1r24-202ENSMUST00000228315 891 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
Trim8Q99PJ2 Smr3a-201ENSMUST00000031211 635 ntAPPRIS P2 TSL 1 (best) BASIC5.41□□□□□ -1.54
Trim8Q99PJ2 Ctag2-201ENSMUST00000033524 854 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Trim8Q99PJ2 1700013H16Rik-201ENSMUST00000067940 1224 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Trim8Q99PJ2 Olfr1261-201ENSMUST00000077785 921 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
Trim8Q99PJ2 Gm10221-201ENSMUST00000088299 309 ntBASIC5.41□□□□□ -1.54
Trim8Q99PJ2 Elmod1-202ENSMUST00000166580 2243 ntAPPRIS ALT1 TSL 5 BASIC5.41□□□□□ -1.54
Trim8Q99PJ2 Cntnap5c-201ENSMUST00000076038 3931 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
Trim8Q99PJ2 Glcci1-203ENSMUST00000161494 3248 ntTSL 2 BASIC5.41□□□□□ -1.54
Trim8Q99PJ2 Ms4a13-202ENSMUST00000188464 1301 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
Trim8Q99PJ2 Gm5890-201ENSMUST00000190145 1336 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Trim8Q99PJ2 Wdr49-203ENSMUST00000204341 1344 ntTSL 5 BASIC5.41□□□□□ -1.54
Trim8Q99PJ2 Olfr1443-203ENSMUST00000215134 3995 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Trim8Q99PJ2 Acer3-201ENSMUST00000033020 11340 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Trim8Q99PJ2 Olfr303-203ENSMUST00000215532 3572 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Trim8Q99PJ2 Usp29-204ENSMUST00000200535 7540 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Trim8Q99PJ2 Cd226-201ENSMUST00000037142 2357 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Trim8Q99PJ2 Vmn1r63-201ENSMUST00000075085 2172 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Trim8Q99PJ2 Gm38067-201ENSMUST00000192346 1911 ntBASIC5.4□□□□□ -1.54
Trim8Q99PJ2 Gm37846-201ENSMUST00000191840 3774 ntBASIC5.4□□□□□ -1.54
Trim8Q99PJ2 Senp8-202ENSMUST00000163586 3570 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.54
Trim8Q99PJ2 Lrriq1-201ENSMUST00000020043 2542 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
Trim8Q99PJ2 Olfr78-201ENSMUST00000060187 3410 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Trim8Q99PJ2 Vmn1r184-204ENSMUST00000227534 4807 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
Trim8Q99PJ2 Lipn-201ENSMUST00000025682 1502 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Trim8Q99PJ2 Olfr329-ps-203ENSMUST00000219448 4052 ntAPPRIS P2 TSL 5 BASIC5.4□□□□□ -1.54
Trim8Q99PJ2 Prl-202ENSMUST00000110369 895 ntAPPRIS P2 TSL 1 (best) BASIC5.4□□□□□ -1.54
Trim8Q99PJ2 Gm23839-201ENSMUST00000116957 109 ntBASIC5.4□□□□□ -1.54
Trim8Q99PJ2 Gm6427-201ENSMUST00000118721 979 ntBASIC5.4□□□□□ -1.54
Trim8Q99PJ2 Olfr1117-ps1-201ENSMUST00000118736 984 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
Trim8Q99PJ2 Gm14600-201ENSMUST00000121032 630 ntBASIC5.4□□□□□ -1.54
Trim8Q99PJ2 Defa-ps14-201ENSMUST00000121373 418 ntBASIC5.4□□□□□ -1.54
Trim8Q99PJ2 Rps11-ps2-201ENSMUST00000121547 456 ntBASIC5.4□□□□□ -1.54
Trim8Q99PJ2 Gm15022-201ENSMUST00000122074 746 ntBASIC5.4□□□□□ -1.54
Trim8Q99PJ2 Gm25291-201ENSMUST00000122795 144 ntBASIC5.4□□□□□ -1.54
Trim8Q99PJ2 Gm15241-201ENSMUST00000125700 474 ntTSL 3 BASIC5.4□□□□□ -1.54
Trim8Q99PJ2 1700047A11Rik-201ENSMUST00000144750 427 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
Trim8Q99PJ2 1700095A21Rik-201ENSMUST00000145269 1069 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
Trim8Q99PJ2 Gm23233-201ENSMUST00000157301 137 ntBASIC5.4□□□□□ -1.54
Trim8Q99PJ2 Gm24965-201ENSMUST00000157922 106 ntBASIC5.4□□□□□ -1.54
Retrieved 100 of 76,532 protein–RNA pairs in 134.5 ms