Protein–RNA interactions for Protein: Q99LF4

Rtcb, tRNA-splicing ligase RtcB homolog, mousemouse

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RtcbQ99LF4 Rfx4-205ENSMUST00000166696 3332 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
RtcbQ99LF4 Olfr384-202ENSMUST00000214228 2576 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
RtcbQ99LF4 Olfr190-203ENSMUST00000216495 8240 ntAPPRIS P1 TSL 3 BASIC6.92□□□□□ -1.3
RtcbQ99LF4 Gm26717-201ENSMUST00000181713 1418 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
RtcbQ99LF4 Lrrc49-201ENSMUST00000053171 3086 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
RtcbQ99LF4 Sulf1-202ENSMUST00000177608 5598 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
RtcbQ99LF4 Lig4-202ENSMUST00000170033 3105 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
RtcbQ99LF4 Gm43229-201ENSMUST00000201812 1850 ntBASIC6.92□□□□□ -1.3
RtcbQ99LF4 Slc9a4-201ENSMUST00000027233 3962 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
RtcbQ99LF4 Gm45352-201ENSMUST00000210140 1452 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
RtcbQ99LF4 Cntn3-202ENSMUST00000203619 5294 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
RtcbQ99LF4 Gm34240-201ENSMUST00000192500 1936 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
RtcbQ99LF4 2700078F05Rik-201ENSMUST00000194331 3244 ntBASIC6.91□□□□□ -1.3
RtcbQ99LF4 Bmpr1b-204ENSMUST00000106232 4164 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
RtcbQ99LF4 Ino80d-206ENSMUST00000172416 13438 ntTSL 5 BASIC6.91□□□□□ -1.3
RtcbQ99LF4 Atp13a5-203ENSMUST00000143373 3789 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
RtcbQ99LF4 Gm9968-201ENSMUST00000147504 2990 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
RtcbQ99LF4 Tdo2-204ENSMUST00000193879 1616 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
RtcbQ99LF4 AC155243.1-201ENSMUST00000220141 2262 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
RtcbQ99LF4 Gm26002-201ENSMUST00000101915 107 ntBASIC6.91□□□□□ -1.3
RtcbQ99LF4 Igkv4-70-201ENSMUST00000103348 379 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
RtcbQ99LF4 Gm24429-201ENSMUST00000104076 132 ntBASIC6.91□□□□□ -1.3
RtcbQ99LF4 Ceacam13-202ENSMUST00000108488 1005 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
RtcbQ99LF4 Gm14766-201ENSMUST00000121689 367 ntBASIC6.91□□□□□ -1.3
RtcbQ99LF4 Gm14162-201ENSMUST00000121985 601 ntBASIC6.91□□□□□ -1.3
RtcbQ99LF4 Gm11254-201ENSMUST00000122368 653 ntBASIC6.91□□□□□ -1.3
RtcbQ99LF4 Mir1946b-201ENSMUST00000157853 133 ntBASIC6.91□□□□□ -1.3
RtcbQ99LF4 Gm25655-201ENSMUST00000158465 290 ntBASIC6.91□□□□□ -1.3
RtcbQ99LF4 Gm10784-201ENSMUST00000178715 238 ntBASIC6.91□□□□□ -1.3
RtcbQ99LF4 Mrgprc1-ps-201ENSMUST00000185552 952 ntBASIC6.91□□□□□ -1.3
RtcbQ99LF4 1700016P04Rik-201ENSMUST00000186770 429 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
RtcbQ99LF4 Scgb1b1-ps-201ENSMUST00000189264 268 ntBASIC6.91□□□□□ -1.3
RtcbQ99LF4 Gm29000-207ENSMUST00000190152 1160 ntTSL 5 BASIC6.91□□□□□ -1.3
RtcbQ99LF4 Gm37719-201ENSMUST00000194615 292 ntBASIC6.91□□□□□ -1.3
RtcbQ99LF4 Gm9057-201ENSMUST00000198791 296 ntBASIC6.91□□□□□ -1.3
RtcbQ99LF4 Gm42663-201ENSMUST00000199883 351 ntBASIC6.91□□□□□ -1.3
RtcbQ99LF4 Gm42604-201ENSMUST00000200077 801 ntTSL 3 BASIC6.91□□□□□ -1.3
RtcbQ99LF4 Gm44748-201ENSMUST00000206040 658 ntTSL 5 BASIC6.91□□□□□ -1.3
RtcbQ99LF4 Gm45246-201ENSMUST00000210820 367 ntBASIC6.91□□□□□ -1.3
RtcbQ99LF4 Olfr638-202ENSMUST00000218325 1158 ntAPPRIS ALT2 TSL 5 BASIC6.91□□□□□ -1.3
RtcbQ99LF4 AC152951.1-201ENSMUST00000218907 266 ntBASIC6.91□□□□□ -1.3
RtcbQ99LF4 AC120540.1-201ENSMUST00000221879 324 ntBASIC6.91□□□□□ -1.3
RtcbQ99LF4 Vmn2r-ps102-203ENSMUST00000222739 604 ntTSL 5 BASIC6.91□□□□□ -1.3
RtcbQ99LF4 AC154426.1-201ENSMUST00000225614 1132 ntBASIC6.91□□□□□ -1.3
RtcbQ99LF4 AC144798.1-201ENSMUST00000228120 391 ntBASIC6.91□□□□□ -1.3
RtcbQ99LF4 Agps-203ENSMUST00000175646 1839 ntAPPRIS ALT2 TSL 5 BASIC6.91□□□□□ -1.3
RtcbQ99LF4 Vmn2r-ps21-201ENSMUST00000177115 2947 ntBASIC6.91□□□□□ -1.3
RtcbQ99LF4 Gm5891-202ENSMUST00000186212 2495 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
RtcbQ99LF4 Gm10662-202ENSMUST00000186928 2495 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
RtcbQ99LF4 Psg-ps1-202ENSMUST00000206181 1943 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
RtcbQ99LF4 Pum2-201ENSMUST00000020915 3587 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
RtcbQ99LF4 Ptprz1-204ENSMUST00000202102 4947 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
RtcbQ99LF4 Ino80d-201ENSMUST00000097718 13675 ntTSL 5 BASIC6.91□□□□□ -1.3
RtcbQ99LF4 Olfr479-203ENSMUST00000214599 3248 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
RtcbQ99LF4 Vmn2r88-204ENSMUST00000228139 3227 ntAPPRIS ALT2 BASIC6.91□□□□□ -1.3
RtcbQ99LF4 1700080O16Rik-201ENSMUST00000033449 1454 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
RtcbQ99LF4 Iqch-203ENSMUST00000163624 3339 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
RtcbQ99LF4 Gm9314-201ENSMUST00000199881 1528 ntBASIC6.91□□□□□ -1.3
RtcbQ99LF4 Olfr318-203ENSMUST00000214728 4552 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
RtcbQ99LF4 Pigb-201ENSMUST00000093819 2866 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
RtcbQ99LF4 Klrk1-205ENSMUST00000168919 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.3
RtcbQ99LF4 Gm3526-201ENSMUST00000164544 1750 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.3
RtcbQ99LF4 Pcdh15-222ENSMUST00000147189 6806 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.3
RtcbQ99LF4 Ranbp17-201ENSMUST00000037522 3950 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.3
RtcbQ99LF4 Olfr97-205ENSMUST00000214848 1861 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.3
RtcbQ99LF4 AC113031.7-201ENSMUST00000228609 1928 ntBASIC6.9□□□□□ -1.3
RtcbQ99LF4 Dennd4c-204ENSMUST00000142837 5870 ntAPPRIS P2 TSL 1 (best) BASIC6.9□□□□□ -1.3
RtcbQ99LF4 Dppa1-202ENSMUST00000109227 551 ntAPPRIS P1 TSL 2 BASIC6.9□□□□□ -1.3
RtcbQ99LF4 Gm14308-202ENSMUST00000117267 777 ntTSL 3 BASIC6.9□□□□□ -1.3
RtcbQ99LF4 Gm16128-201ENSMUST00000117855 626 ntBASIC6.9□□□□□ -1.3
RtcbQ99LF4 Gm11844-201ENSMUST00000129207 459 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
RtcbQ99LF4 Gm14505-201ENSMUST00000145383 831 ntTSL 3 BASIC6.9□□□□□ -1.3
RtcbQ99LF4 Gm25559-201ENSMUST00000157182 74 ntBASIC6.9□□□□□ -1.3
RtcbQ99LF4 Scarna13-201ENSMUST00000158164 275 ntBASIC6.9□□□□□ -1.3
RtcbQ99LF4 Gm20543-201ENSMUST00000174200 726 ntBASIC6.9□□□□□ -1.3
RtcbQ99LF4 Gm26962-201ENSMUST00000182545 265 ntTSL 3 BASIC6.9□□□□□ -1.3
RtcbQ99LF4 Mir6943-201ENSMUST00000185186 66 ntBASIC6.9□□□□□ -1.3
RtcbQ99LF4 Gm29216-201ENSMUST00000187117 492 ntBASIC6.9□□□□□ -1.3
RtcbQ99LF4 4930447N08Rik-201ENSMUST00000196290 497 ntTSL 3 BASIC6.9□□□□□ -1.3
RtcbQ99LF4 Gm29736-201ENSMUST00000198189 385 ntBASIC6.9□□□□□ -1.3
RtcbQ99LF4 AC134334.1-201ENSMUST00000214277 255 ntBASIC6.9□□□□□ -1.3
RtcbQ99LF4 AC152979.3-201ENSMUST00000217720 479 ntBASIC6.9□□□□□ -1.3
RtcbQ99LF4 AC131720.2-201ENSMUST00000220420 431 ntBASIC6.9□□□□□ -1.3
RtcbQ99LF4 AC154709.1-201ENSMUST00000222304 446 ntTSL 3 BASIC6.9□□□□□ -1.3
RtcbQ99LF4 AC131747.1-201ENSMUST00000226159 793 ntBASIC6.9□□□□□ -1.3
RtcbQ99LF4 AC116656.1-201ENSMUST00000227040 755 ntBASIC6.9□□□□□ -1.3
RtcbQ99LF4 AC154283.1-201ENSMUST00000228417 389 ntBASIC6.9□□□□□ -1.3
RtcbQ99LF4 Capza3-201ENSMUST00000043797 1222 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
RtcbQ99LF4 Olfr178-201ENSMUST00000058564 960 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
RtcbQ99LF4 Rps26-ps1-201ENSMUST00000077208 449 ntBASIC6.9□□□□□ -1.3
RtcbQ99LF4 Skint11-201ENSMUST00000079915 820 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
RtcbQ99LF4 Olfr1456-ps1-201ENSMUST00000087769 518 ntBASIC6.9□□□□□ -1.3
RtcbQ99LF4 Olfr1000-201ENSMUST00000099921 945 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
RtcbQ99LF4 Gm37041-201ENSMUST00000195873 3853 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
RtcbQ99LF4 Atf2-206ENSMUST00000112016 3943 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
RtcbQ99LF4 Gm8700-201ENSMUST00000222187 3054 ntBASIC6.9□□□□□ -1.3
RtcbQ99LF4 Gm10256-201ENSMUST00000179404 1358 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.31
RtcbQ99LF4 AC154642.2-201ENSMUST00000223657 2485 ntBASIC6.9□□□□□ -1.31
RtcbQ99LF4 Olfr1423-202ENSMUST00000214472 5570 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.31
RtcbQ99LF4 Gm42520-201ENSMUST00000199642 1502 ntBASIC6.9□□□□□ -1.31
Retrieved 100 of 76,532 protein–RNA pairs in 80 ms