Protein–RNA interactions for Protein: Q8CDD9

Lrif1, Ligand-dependent nuclear receptor-interacting factor 1, mousemouse

Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrif1Q8CDD9 Gm14819-201ENSMUST00000101645 928 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
Lrif1Q8CDD9 Gm25096-201ENSMUST00000104043 129 ntBASIC4.49□□□□□ -1.69
Lrif1Q8CDD9 Mir105-201ENSMUST00000104655 80 ntBASIC4.49□□□□□ -1.69
Lrif1Q8CDD9 Gm17193-201ENSMUST00000116345 691 ntTSL 5 BASIC4.49□□□□□ -1.69
Lrif1Q8CDD9 Gm25103-201ENSMUST00000122671 318 ntBASIC4.49□□□□□ -1.69
Lrif1Q8CDD9 Gm12259-201ENSMUST00000138391 328 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
Lrif1Q8CDD9 Gm23902-201ENSMUST00000157571 134 ntBASIC4.49□□□□□ -1.69
Lrif1Q8CDD9 Gm24188-201ENSMUST00000157980 108 ntBASIC4.49□□□□□ -1.69
Lrif1Q8CDD9 Gm17191-201ENSMUST00000165200 417 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
Lrif1Q8CDD9 Cldn34c1-206ENSMUST00000169445 705 ntAPPRIS P3 TSL 5 BASIC4.49□□□□□ -1.69
Lrif1Q8CDD9 4930509E16Rik-201ENSMUST00000181405 1191 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
Lrif1Q8CDD9 Gm2950-201ENSMUST00000185530 520 ntBASIC4.49□□□□□ -1.69
Lrif1Q8CDD9 BE692007-201ENSMUST00000186054 954 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
Lrif1Q8CDD9 Gm4290-201ENSMUST00000206897 814 ntBASIC4.49□□□□□ -1.69
Lrif1Q8CDD9 Gm19366-201ENSMUST00000206996 156 ntBASIC4.49□□□□□ -1.69
Lrif1Q8CDD9 Gm38843-201ENSMUST00000209189 323 ntTSL 5 BASIC4.49□□□□□ -1.69
Lrif1Q8CDD9 Mir670hg-207ENSMUST00000211619 819 ntTSL 5 BASIC4.49□□□□□ -1.69
Lrif1Q8CDD9 Gm19885-201ENSMUST00000212853 343 ntBASIC4.49□□□□□ -1.69
Lrif1Q8CDD9 1700025K04Rik-201ENSMUST00000218075 1174 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
Lrif1Q8CDD9 AC152062.1-201ENSMUST00000218129 386 ntBASIC4.49□□□□□ -1.69
Lrif1Q8CDD9 AC125190.2-201ENSMUST00000221160 497 ntBASIC4.49□□□□□ -1.69
Lrif1Q8CDD9 AC126253.2-201ENSMUST00000226518 205 ntBASIC4.49□□□□□ -1.69
Lrif1Q8CDD9 AC133910.1-201ENSMUST00000228128 624 ntBASIC4.49□□□□□ -1.69
Lrif1Q8CDD9 Olfr1323-201ENSMUST00000057071 930 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
Lrif1Q8CDD9 Mup3-201ENSMUST00000084531 938 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
Lrif1Q8CDD9 Gm5458-201ENSMUST00000096121 997 ntAPPRIS P1 TSL 2 BASIC4.49□□□□□ -1.69
Lrif1Q8CDD9 Gm45211-201ENSMUST00000206208 2650 ntBASIC4.49□□□□□ -1.69
Lrif1Q8CDD9 Gm10319-201ENSMUST00000078431 1355 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
Lrif1Q8CDD9 Olfr1440-205ENSMUST00000216145 7542 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
Lrif1Q8CDD9 4932429P05Rik-201ENSMUST00000113958 3093 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
Lrif1Q8CDD9 Gm5925-201ENSMUST00000105016 1497 ntBASIC4.49□□□□□ -1.69
Lrif1Q8CDD9 Nlrp2-201ENSMUST00000045022 3404 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
Lrif1Q8CDD9 Agtr2-201ENSMUST00000089188 3283 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
Lrif1Q8CDD9 Gm43185-201ENSMUST00000197507 2775 ntBASIC4.48□□□□□ -1.69
Lrif1Q8CDD9 AC163296.2-201ENSMUST00000220177 1315 ntBASIC4.48□□□□□ -1.69
Lrif1Q8CDD9 AC152414.1-201ENSMUST00000218784 2287 ntTSL 5 BASIC4.48□□□□□ -1.69
Lrif1Q8CDD9 Klhl13-204ENSMUST00000115317 3216 ntAPPRIS ALT1 TSL 5 BASIC4.48□□□□□ -1.69
Lrif1Q8CDD9 Olfr823-202ENSMUST00000213145 1431 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
Lrif1Q8CDD9 Olfr699-202ENSMUST00000215952 3669 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
Lrif1Q8CDD9 Olfr1191-ps1-202ENSMUST00000217379 5933 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
Lrif1Q8CDD9 Gm45804-201ENSMUST00000212137 3435 ntBASIC4.48□□□□□ -1.69
Lrif1Q8CDD9 Tmem167-201ENSMUST00000012566 1541 ntTSL 5 BASIC4.48□□□□□ -1.69
Lrif1Q8CDD9 Zfp873-201ENSMUST00000105313 1893 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
Lrif1Q8CDD9 Glyat-202ENSMUST00000119960 3296 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
Lrif1Q8CDD9 2700016F22Rik-201ENSMUST00000181556 3605 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
Lrif1Q8CDD9 Macrod2-203ENSMUST00000110061 887 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
Lrif1Q8CDD9 Gm16107-201ENSMUST00000162523 862 ntBASIC4.48□□□□□ -1.69
Lrif1Q8CDD9 Gm21244-201ENSMUST00000178447 684 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
Lrif1Q8CDD9 Mir6344-201ENSMUST00000183462 104 ntBASIC4.48□□□□□ -1.69
Lrif1Q8CDD9 Gm19585-201ENSMUST00000186007 587 ntTSL 2 BASIC4.48□□□□□ -1.69
Lrif1Q8CDD9 1700128A07Rik-201ENSMUST00000186311 860 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
Lrif1Q8CDD9 Gm29332-201ENSMUST00000190829 227 ntBASIC4.48□□□□□ -1.69
Lrif1Q8CDD9 Gm8599-201ENSMUST00000193033 457 ntBASIC4.48□□□□□ -1.69
Lrif1Q8CDD9 Gm37095-201ENSMUST00000195421 205 ntBASIC4.48□□□□□ -1.69
Lrif1Q8CDD9 Gm34224-201ENSMUST00000204606 364 ntBASIC4.48□□□□□ -1.69
Lrif1Q8CDD9 Olfr852-ps1-201ENSMUST00000212273 226 ntBASIC4.48□□□□□ -1.69
Lrif1Q8CDD9 Gm10037-202ENSMUST00000221266 549 ntAPPRIS P5 TSL 2 BASIC4.48□□□□□ -1.69
Lrif1Q8CDD9 AC131745.1-201ENSMUST00000223660 330 ntBASIC4.48□□□□□ -1.69
Lrif1Q8CDD9 AC164116.1-201ENSMUST00000225810 622 ntBASIC4.48□□□□□ -1.69
Lrif1Q8CDD9 AC112142.1-206ENSMUST00000228136 982 ntBASIC4.48□□□□□ -1.69
Lrif1Q8CDD9 4933400A11Rik-201ENSMUST00000068874 1230 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
Lrif1Q8CDD9 Olfr955-201ENSMUST00000073946 945 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
Lrif1Q8CDD9 Vmn1r52-201ENSMUST00000079832 930 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
Lrif1Q8CDD9 Gm23300-201ENSMUST00000082712 125 ntBASIC4.48□□□□□ -1.69
Lrif1Q8CDD9 Mir202-201ENSMUST00000083568 72 ntBASIC4.48□□□□□ -1.69
Lrif1Q8CDD9 Abca16-201ENSMUST00000056042 5085 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
Lrif1Q8CDD9 Olfr145-202ENSMUST00000213688 6691 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
Lrif1Q8CDD9 Jchain-201ENSMUST00000087033 1393 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
Lrif1Q8CDD9 Gm21854-202ENSMUST00000190391 1480 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
Lrif1Q8CDD9 Lipo5-201ENSMUST00000156818 2003 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
Lrif1Q8CDD9 Vmn2r4-201ENSMUST00000170280 2484 ntAPPRIS P2 TSL 5 BASIC4.48□□□□□ -1.69
Lrif1Q8CDD9 AL589737.1-201ENSMUST00000221163 2763 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
Lrif1Q8CDD9 2700099C18Rik-204ENSMUST00000183133 1333 ntBASIC4.47□□□□□ -1.69
Lrif1Q8CDD9 AC190403.1-201ENSMUST00000224515 1325 ntBASIC4.47□□□□□ -1.69
Lrif1Q8CDD9 Vmn2r-ps123-201ENSMUST00000176763 2410 ntBASIC4.47□□□□□ -1.69
Lrif1Q8CDD9 Gm281-201ENSMUST00000144914 2952 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
Lrif1Q8CDD9 Zfp72-202ENSMUST00000223163 4153 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
Lrif1Q8CDD9 Mef2c-201ENSMUST00000005722 6217 ntTSL 5 BASIC4.47□□□□□ -1.69
Lrif1Q8CDD9 Vmn2r-ps11-201ENSMUST00000176568 2730 ntBASIC4.47□□□□□ -1.69
Lrif1Q8CDD9 Rbm41-203ENSMUST00000113007 3691 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
Lrif1Q8CDD9 Olfr1331-202ENSMUST00000106360 3230 ntAPPRIS P2 TSL 5 BASIC4.47□□□□□ -1.69
Lrif1Q8CDD9 Rbbp6-203ENSMUST00000098062 6345 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
Lrif1Q8CDD9 Tdo2-201ENSMUST00000029645 3431 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
Lrif1Q8CDD9 4930528J11Rik-201ENSMUST00000201689 3611 ntBASIC4.47□□□□□ -1.69
Lrif1Q8CDD9 Trappc1-203ENSMUST00000102602 751 ntAPPRIS P1 TSL 2 BASIC4.47□□□□□ -1.69
Lrif1Q8CDD9 Gm15560-201ENSMUST00000117107 643 ntBASIC4.47□□□□□ -1.69
Lrif1Q8CDD9 Ube2v2-204ENSMUST00000118236 893 ntTSL 5 BASIC4.47□□□□□ -1.69
Lrif1Q8CDD9 Gm15288-201ENSMUST00000126640 653 ntTSL 3 BASIC4.47□□□□□ -1.69
Lrif1Q8CDD9 Gm15905-201ENSMUST00000137042 298 ntBASIC4.47□□□□□ -1.69
Lrif1Q8CDD9 Gm24217-201ENSMUST00000158260 133 ntBASIC4.47□□□□□ -1.69
Lrif1Q8CDD9 Gm3053-201ENSMUST00000161709 616 ntBASIC4.47□□□□□ -1.69
Lrif1Q8CDD9 Prl5a1-201ENSMUST00000017208 1061 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
Lrif1Q8CDD9 Vmn1r-ps28-201ENSMUST00000174767 942 ntBASIC4.47□□□□□ -1.69
Lrif1Q8CDD9 Gm20711-201ENSMUST00000177351 714 ntTSL 3 BASIC4.47□□□□□ -1.69
Lrif1Q8CDD9 Snhg6-205ENSMUST00000182819 816 ntTSL 2 BASIC4.47□□□□□ -1.69
Lrif1Q8CDD9 1600010M07Rik-201ENSMUST00000185931 1204 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
Lrif1Q8CDD9 Skint2-204ENSMUST00000186969 1258 ntAPPRIS P2 TSL 1 (best) BASIC4.47□□□□□ -1.69
Lrif1Q8CDD9 Gm29148-201ENSMUST00000188140 336 ntBASIC4.47□□□□□ -1.69
Lrif1Q8CDD9 Gm29036-201ENSMUST00000189967 877 ntBASIC4.47□□□□□ -1.69
Lrif1Q8CDD9 4930440C22Rik-202ENSMUST00000190754 512 ntTSL 3 BASIC4.47□□□□□ -1.69
Retrieved 100 of 76,532 protein–RNA pairs in 81.9 ms