Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Rd3l-203ENSMUST00000189759 1427 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Trub1Q8C0D0 Olfr1316-202ENSMUST00000213696 4184 ntAPPRIS ALT1 TSL 5 BASIC4.44□□□□□ -1.7
Trub1Q8C0D0 Gm44847-201ENSMUST00000207104 1991 ntBASIC4.44□□□□□ -1.7
Trub1Q8C0D0 Gm18189-201ENSMUST00000218153 1951 ntBASIC4.44□□□□□ -1.7
Trub1Q8C0D0 Olfr970-203ENSMUST00000215922 1739 ntAPPRIS P1 TSL 3 BASIC4.43□□□□□ -1.7
Trub1Q8C0D0 Zfp595-201ENSMUST00000109735 3896 ntAPPRIS P2 TSL 1 (best) BASIC4.43□□□□□ -1.7
Trub1Q8C0D0 Gm45131-201ENSMUST00000208051 2582 ntBASIC4.43□□□□□ -1.7
Trub1Q8C0D0 2210418O10Rik-203ENSMUST00000136719 2314 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
Trub1Q8C0D0 Zfp11-201ENSMUST00000049778 3929 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
Trub1Q8C0D0 Gm1968-201ENSMUST00000100016 348 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
Trub1Q8C0D0 Smpx-202ENSMUST00000112520 503 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
Trub1Q8C0D0 Gm11432-201ENSMUST00000117334 231 ntBASIC4.43□□□□□ -1.7
Trub1Q8C0D0 Gm12328-201ENSMUST00000118611 197 ntBASIC4.43□□□□□ -1.7
Trub1Q8C0D0 Gm15603-201ENSMUST00000119252 492 ntBASIC4.43□□□□□ -1.7
Trub1Q8C0D0 Gm14908-201ENSMUST00000120930 1286 ntBASIC4.43□□□□□ -1.7
Trub1Q8C0D0 Clec2f-201ENSMUST00000121051 374 ntBASIC4.43□□□□□ -1.7
Trub1Q8C0D0 6030471H07Rik-201ENSMUST00000125884 492 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
Trub1Q8C0D0 Rrm2b-203ENSMUST00000137636 900 ntTSL 5 BASIC4.43□□□□□ -1.7
Trub1Q8C0D0 Gm16085-201ENSMUST00000144575 453 ntTSL 3 BASIC4.43□□□□□ -1.7
Trub1Q8C0D0 Gm4487-201ENSMUST00000150617 442 ntBASIC4.43□□□□□ -1.7
Trub1Q8C0D0 Bhlhe40-202ENSMUST00000163617 476 ntTSL 2 BASIC4.43□□□□□ -1.7
Trub1Q8C0D0 Cldn34c1-206ENSMUST00000169445 705 ntAPPRIS P3 TSL 5 BASIC4.43□□□□□ -1.7
Trub1Q8C0D0 Gm22859-201ENSMUST00000174978 122 ntBASIC4.43□□□□□ -1.7
Trub1Q8C0D0 Gm23617-201ENSMUST00000175410 95 ntBASIC4.43□□□□□ -1.7
Trub1Q8C0D0 Gm13249-201ENSMUST00000177803 345 ntBASIC4.43□□□□□ -1.7
Trub1Q8C0D0 Gm13144-201ENSMUST00000179385 345 ntBASIC4.43□□□□□ -1.7
Trub1Q8C0D0 Gm26723-201ENSMUST00000180771 787 ntTSL 5 BASIC4.43□□□□□ -1.7
Trub1Q8C0D0 Gm27564-201ENSMUST00000185196 96 ntBASIC4.43□□□□□ -1.7
Trub1Q8C0D0 Gm18558-201ENSMUST00000186253 1214 ntBASIC4.43□□□□□ -1.7
Trub1Q8C0D0 Gm38250-201ENSMUST00000192691 766 ntTSL 3 BASIC4.43□□□□□ -1.7
Trub1Q8C0D0 1700013M08Rik-201ENSMUST00000197709 683 ntTSL 3 BASIC4.43□□□□□ -1.7
Trub1Q8C0D0 Gm33093-201ENSMUST00000197751 790 ntTSL 5 BASIC4.43□□□□□ -1.7
Trub1Q8C0D0 Gm43464-201ENSMUST00000198003 317 ntTSL 3 BASIC4.43□□□□□ -1.7
Trub1Q8C0D0 Fbxw23-201ENSMUST00000198015 425 ntTSL 2 BASIC4.43□□□□□ -1.7
Trub1Q8C0D0 Gm18452-201ENSMUST00000202968 1111 ntBASIC4.43□□□□□ -1.7
Trub1Q8C0D0 Gm44023-201ENSMUST00000203710 469 ntBASIC4.43□□□□□ -1.7
Trub1Q8C0D0 Olfr673-ps1-201ENSMUST00000210859 411 ntBASIC4.43□□□□□ -1.7
Trub1Q8C0D0 AC132121.1-201ENSMUST00000220774 332 ntBASIC4.43□□□□□ -1.7
Trub1Q8C0D0 CT030170.6-201ENSMUST00000221149 550 ntTSL 5 BASIC4.43□□□□□ -1.7
Trub1Q8C0D0 CT030657.1-201ENSMUST00000222397 378 ntTSL 5 BASIC4.43□□□□□ -1.7
Trub1Q8C0D0 Gtpbp8-201ENSMUST00000023348 836 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
Trub1Q8C0D0 Vmn1r211-201ENSMUST00000073728 985 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
Trub1Q8C0D0 Gm37195-201ENSMUST00000192006 3018 ntBASIC4.43□□□□□ -1.7
Trub1Q8C0D0 Gm17752-201ENSMUST00000185787 3726 ntBASIC4.43□□□□□ -1.7
Trub1Q8C0D0 Gm20139-202ENSMUST00000216041 3888 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
Trub1Q8C0D0 4930467D21Rik-201ENSMUST00000180634 2530 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
Trub1Q8C0D0 Vmn1r171-204ENSMUST00000226733 2918 ntAPPRIS ALT2 BASIC4.42□□□□□ -1.7
Trub1Q8C0D0 AC115034.1-201ENSMUST00000215393 3846 ntBASIC4.42□□□□□ -1.7
Trub1Q8C0D0 AC156632.1-201ENSMUST00000220626 3845 ntBASIC4.42□□□□□ -1.7
Trub1Q8C0D0 Rgs21-202ENSMUST00000184189 1674 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
Trub1Q8C0D0 Gm43528-201ENSMUST00000199492 1674 ntBASIC4.42□□□□□ -1.7
Trub1Q8C0D0 Vmn1r42-202ENSMUST00000226436 4045 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
Trub1Q8C0D0 Mga-203ENSMUST00000110773 13577 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
Trub1Q8C0D0 Trav8n-2-201ENSMUST00000103632 408 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
Trub1Q8C0D0 Gm26019-201ENSMUST00000104407 119 ntBASIC4.42□□□□□ -1.7
Trub1Q8C0D0 BB287469-201ENSMUST00000110149 1851 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
Trub1Q8C0D0 Gm14854-201ENSMUST00000117758 841 ntBASIC4.42□□□□□ -1.7
Trub1Q8C0D0 Gm15426-201ENSMUST00000117823 556 ntBASIC4.42□□□□□ -1.7
Trub1Q8C0D0 Gm5379-201ENSMUST00000120973 826 ntBASIC4.42□□□□□ -1.7
Trub1Q8C0D0 Gm15141-201ENSMUST00000121860 729 ntBASIC4.42□□□□□ -1.7
Trub1Q8C0D0 Gm14916-201ENSMUST00000121904 204 ntBASIC4.42□□□□□ -1.7
Trub1Q8C0D0 Gm12708-201ENSMUST00000126143 349 ntTSL 5 BASIC4.42□□□□□ -1.7
Trub1Q8C0D0 Gm15338-201ENSMUST00000151884 552 ntTSL 3 BASIC4.42□□□□□ -1.7
Trub1Q8C0D0 Gm25665-201ENSMUST00000157695 110 ntBASIC4.42□□□□□ -1.7
Trub1Q8C0D0 4430402I18Rik-203ENSMUST00000160542 1057 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
Trub1Q8C0D0 Gm3053-201ENSMUST00000161709 616 ntBASIC4.42□□□□□ -1.7
Trub1Q8C0D0 Gm17109-201ENSMUST00000163985 358 ntBASIC4.42□□□□□ -1.7
Trub1Q8C0D0 Gm4027-201ENSMUST00000164838 1850 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
Trub1Q8C0D0 Vmn1r-ps32-201ENSMUST00000174389 956 ntBASIC4.42□□□□□ -1.7
Trub1Q8C0D0 Mir3090-201ENSMUST00000175597 87 ntBASIC4.42□□□□□ -1.7
Trub1Q8C0D0 4933440J02Rik-201ENSMUST00000181547 1144 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
Trub1Q8C0D0 Obox8-201ENSMUST00000184356 1167 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
Trub1Q8C0D0 Gm18342-201ENSMUST00000186987 694 ntBASIC4.42□□□□□ -1.7
Trub1Q8C0D0 Gm28190-201ENSMUST00000189766 722 ntBASIC4.42□□□□□ -1.7
Trub1Q8C0D0 2610001A08Rik-201ENSMUST00000193315 867 ntBASIC4.42□□□□□ -1.7
Trub1Q8C0D0 Gm43655-201ENSMUST00000197367 222 ntBASIC4.42□□□□□ -1.7
Trub1Q8C0D0 Gm43730-201ENSMUST00000199863 372 ntBASIC4.42□□□□□ -1.7
Trub1Q8C0D0 4930478M09Rik-201ENSMUST00000201366 1113 ntBASIC4.42□□□□□ -1.7
Trub1Q8C0D0 Gm44145-201ENSMUST00000203711 172 ntTSL 3 BASIC4.42□□□□□ -1.7
Trub1Q8C0D0 4930598N05Rik-204ENSMUST00000207733 675 ntTSL 3 BASIC4.42□□□□□ -1.7
Trub1Q8C0D0 Gm44946-201ENSMUST00000208425 572 ntBASIC4.42□□□□□ -1.7
Trub1Q8C0D0 Gm39197-201ENSMUST00000212069 457 ntBASIC4.42□□□□□ -1.7
Trub1Q8C0D0 Olfr367-ps-203ENSMUST00000213819 541 ntTSL 3 BASIC4.42□□□□□ -1.7
Trub1Q8C0D0 AC117237.1-201ENSMUST00000224035 395 ntBASIC4.42□□□□□ -1.7
Trub1Q8C0D0 Pate4-201ENSMUST00000034610 1072 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
Trub1Q8C0D0 Gm7117-201ENSMUST00000071515 387 ntBASIC4.42□□□□□ -1.7
Trub1Q8C0D0 Olfr192-201ENSMUST00000080251 925 ntBASIC4.42□□□□□ -1.7
Trub1Q8C0D0 Olfr740-201ENSMUST00000089838 936 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
Trub1Q8C0D0 AC154184.1-201ENSMUST00000224375 1620 ntBASIC4.42□□□□□ -1.7
Trub1Q8C0D0 Serpina6-201ENSMUST00000044159 1605 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
Trub1Q8C0D0 Gm44283-201ENSMUST00000204461 3950 ntBASIC4.42□□□□□ -1.7
Trub1Q8C0D0 Vmn1r58-201ENSMUST00000108569 10140 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
Trub1Q8C0D0 Vmn1r72-202ENSMUST00000209638 6501 ntAPPRIS P1 TSL 3 BASIC4.42□□□□□ -1.7
Trub1Q8C0D0 Gm26523-201ENSMUST00000180713 1658 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
Trub1Q8C0D0 AC153964.1-201ENSMUST00000219677 3142 ntBASIC4.41□□□□□ -1.7
Trub1Q8C0D0 Mybpc1-201ENSMUST00000119185 3752 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
Trub1Q8C0D0 AI314180-203ENSMUST00000107557 4946 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
Trub1Q8C0D0 AC154313.1-201ENSMUST00000217755 3841 ntBASIC4.41□□□□□ -1.7
Trub1Q8C0D0 Ifi208-202ENSMUST00000169857 1767 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
Trub1Q8C0D0 Gm20631-201ENSMUST00000177239 5697 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
Retrieved 100 of 76,532 protein–RNA pairs in 74.8 ms