Protein–RNA interactions for Protein: Q8BL00

Cdhr3, Cadherin-related family member 3, mousemouse

Predictions only

Length 831 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr3Q8BL00 Vmn2r39-201ENSMUST00000174388 3577 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
Cdhr3Q8BL00 Vmn1r1-203ENSMUST00000227629 3654 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
Cdhr3Q8BL00 Cftr-201ENSMUST00000045706 6303 ntAPPRIS P2 TSL 1 (best) BASIC4.08□□□□□ -1.76
Cdhr3Q8BL00 Neat1-201ENSMUST00000173672 20771 ntBASIC4.08□□□□□ -1.76
Cdhr3Q8BL00 4930404H24Rik-201ENSMUST00000109783 331 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
Cdhr3Q8BL00 Olfr987-202ENSMUST00000111598 1418 ntAPPRIS P1 TSL 3 BASIC4.08□□□□□ -1.76
Cdhr3Q8BL00 Spin2d-201ENSMUST00000114517 1015 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
Cdhr3Q8BL00 Gm14163-201ENSMUST00000117342 217 ntBASIC4.08□□□□□ -1.76
Cdhr3Q8BL00 Hikeshi-203ENSMUST00000117354 297 ntTSL 2 BASIC4.08□□□□□ -1.76
Cdhr3Q8BL00 Postn-204ENSMUST00000117373 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
Cdhr3Q8BL00 Gm11550-201ENSMUST00000118210 699 ntBASIC4.08□□□□□ -1.76
Cdhr3Q8BL00 Gm13537-201ENSMUST00000120467 267 ntBASIC4.08□□□□□ -1.76
Cdhr3Q8BL00 Gm13788-201ENSMUST00000120767 601 ntBASIC4.08□□□□□ -1.76
Cdhr3Q8BL00 Gm15537-201ENSMUST00000126677 485 ntTSL 2 BASIC4.08□□□□□ -1.76
Cdhr3Q8BL00 Gm3160-201ENSMUST00000128343 607 ntBASIC4.08□□□□□ -1.76
Cdhr3Q8BL00 Gm13584-201ENSMUST00000137134 603 ntTSL 3 BASIC4.08□□□□□ -1.76
Cdhr3Q8BL00 Gm2182-201ENSMUST00000145243 663 ntBASIC4.08□□□□□ -1.76
Cdhr3Q8BL00 Gm23250-201ENSMUST00000157444 267 ntBASIC4.08□□□□□ -1.76
Cdhr3Q8BL00 Gm22895-201ENSMUST00000157508 308 ntBASIC4.08□□□□□ -1.76
Cdhr3Q8BL00 Gm23496-201ENSMUST00000157741 248 ntBASIC4.08□□□□□ -1.76
Cdhr3Q8BL00 Gm24636-201ENSMUST00000158673 288 ntBASIC4.08□□□□□ -1.76
Cdhr3Q8BL00 Gm2389-201ENSMUST00000160487 189 ntBASIC4.08□□□□□ -1.76
Cdhr3Q8BL00 Gm16134-201ENSMUST00000161714 336 ntBASIC4.08□□□□□ -1.76
Cdhr3Q8BL00 4933403O08Rik-203ENSMUST00000164272 1517 ntAPPRIS P2 TSL 1 (best) BASIC4.08□□□□□ -1.76
Cdhr3Q8BL00 Gm6245-201ENSMUST00000164699 768 ntBASIC4.08□□□□□ -1.76
Cdhr3Q8BL00 Phf11c-201ENSMUST00000166912 3459 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
Cdhr3Q8BL00 Gm2959-201ENSMUST00000169844 621 ntBASIC4.08□□□□□ -1.76
Cdhr3Q8BL00 Vmn2r46-201ENSMUST00000171523 2430 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
Cdhr3Q8BL00 Gm27008-201ENSMUST00000182400 1360 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
Cdhr3Q8BL00 Rian-214ENSMUST00000183026 596 ntTSL 5 BASIC4.08□□□□□ -1.76
Cdhr3Q8BL00 Gm29086-201ENSMUST00000186774 222 ntBASIC4.08□□□□□ -1.76
Cdhr3Q8BL00 Gm29085-201ENSMUST00000187108 225 ntBASIC4.08□□□□□ -1.76
Cdhr3Q8BL00 Gm3145-201ENSMUST00000188584 220 ntBASIC4.08□□□□□ -1.76
Cdhr3Q8BL00 Gm33093-201ENSMUST00000197751 790 ntTSL 5 BASIC4.08□□□□□ -1.76
Cdhr3Q8BL00 Gm43144-201ENSMUST00000198256 485 ntBASIC4.08□□□□□ -1.76
Cdhr3Q8BL00 2400006E01Rik-203ENSMUST00000199633 643 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
Cdhr3Q8BL00 Gm9560-201ENSMUST00000205012 1201 ntBASIC4.08□□□□□ -1.76
Cdhr3Q8BL00 Gm44646-201ENSMUST00000205847 421 ntTSL 2 BASIC4.08□□□□□ -1.76
Cdhr3Q8BL00 Gm44865-201ENSMUST00000207240 531 ntBASIC4.08□□□□□ -1.76
Cdhr3Q8BL00 Gm30790-201ENSMUST00000208256 958 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
Cdhr3Q8BL00 Gm45608-201ENSMUST00000210948 389 ntBASIC4.08□□□□□ -1.76
Cdhr3Q8BL00 Olfr1176-202ENSMUST00000213778 2823 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
Cdhr3Q8BL00 Gm34885-201ENSMUST00000217440 4070 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
Cdhr3Q8BL00 Gm5649-201ENSMUST00000217918 951 ntBASIC4.08□□□□□ -1.76
Cdhr3Q8BL00 AC110381.1-201ENSMUST00000218987 586 ntBASIC4.08□□□□□ -1.76
Cdhr3Q8BL00 CT025616.1-201ENSMUST00000221158 412 ntBASIC4.08□□□□□ -1.76
Cdhr3Q8BL00 Gm6056-201ENSMUST00000221253 488 ntBASIC4.08□□□□□ -1.76
Cdhr3Q8BL00 AC159231.1-201ENSMUST00000225365 226 ntBASIC4.08□□□□□ -1.76
Cdhr3Q8BL00 AC164116.1-201ENSMUST00000225810 622 ntBASIC4.08□□□□□ -1.76
Cdhr3Q8BL00 AC192088.3-201ENSMUST00000227858 831 ntBASIC4.08□□□□□ -1.76
Cdhr3Q8BL00 AC106830.1-201ENSMUST00000228032 1003 ntBASIC4.08□□□□□ -1.76
Cdhr3Q8BL00 Ccl11-201ENSMUST00000000342 1082 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
Cdhr3Q8BL00 Plcb4-201ENSMUST00000035646 3635 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
Cdhr3Q8BL00 Gmfg-201ENSMUST00000078845 637 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
Cdhr3Q8BL00 Olfr291-202ENSMUST00000217039 3471 ntAPPRIS ALT2 TSL 2 BASIC4.08□□□□□ -1.76
Cdhr3Q8BL00 Gm38125-201ENSMUST00000194136 3438 ntBASIC4.08□□□□□ -1.76
Cdhr3Q8BL00 Gm37696-201ENSMUST00000194223 3349 ntBASIC4.08□□□□□ -1.76
Cdhr3Q8BL00 Gm19744-204ENSMUST00000188936 4533 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
Cdhr3Q8BL00 Ptgs2-201ENSMUST00000035065 4453 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
Cdhr3Q8BL00 Gm38260-201ENSMUST00000193573 3995 ntBASIC4.07□□□□□ -1.76
Cdhr3Q8BL00 Gm26522-201ENSMUST00000181565 1555 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
Cdhr3Q8BL00 AC149294.7-201ENSMUST00000227475 1432 ntBASIC4.07□□□□□ -1.76
Cdhr3Q8BL00 Olfr148-202ENSMUST00000216801 2775 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
Cdhr3Q8BL00 Trbv20-201ENSMUST00000103277 335 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
Cdhr3Q8BL00 Vmn1r124-201ENSMUST00000105200 924 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
Cdhr3Q8BL00 Rps18-ps2-201ENSMUST00000119493 398 ntBASIC4.07□□□□□ -1.76
Cdhr3Q8BL00 Gm6305-201ENSMUST00000121027 1012 ntBASIC4.07□□□□□ -1.76
Cdhr3Q8BL00 Hmgb1-ps5-201ENSMUST00000121058 557 ntBASIC4.07□□□□□ -1.76
Cdhr3Q8BL00 Gm14784-201ENSMUST00000121604 663 ntBASIC4.07□□□□□ -1.76
Cdhr3Q8BL00 Gm12650-201ENSMUST00000121966 258 ntBASIC4.07□□□□□ -1.76
Cdhr3Q8BL00 Gm12162-201ENSMUST00000123422 154 ntTSL 5 BASIC4.07□□□□□ -1.76
Cdhr3Q8BL00 Gm15288-201ENSMUST00000126640 653 ntTSL 3 BASIC4.07□□□□□ -1.76
Cdhr3Q8BL00 Xaf1-202ENSMUST00000140842 651 ntTSL 3 BASIC4.07□□□□□ -1.76
Cdhr3Q8BL00 4930440I19Rik-201ENSMUST00000144728 992 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
Cdhr3Q8BL00 Gm12707-201ENSMUST00000155789 489 ntTSL 3 BASIC4.07□□□□□ -1.76
Cdhr3Q8BL00 Gm21973-201ENSMUST00000157020 358 ntAPPRIS P1 TSL 3 BASIC4.07□□□□□ -1.76
Cdhr3Q8BL00 Gm3182-202ENSMUST00000169364 997 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
Cdhr3Q8BL00 Gm7876-201ENSMUST00000169465 984 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
Cdhr3Q8BL00 Gm6337-202ENSMUST00000170613 997 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
Cdhr3Q8BL00 Gm17160-201ENSMUST00000170645 260 ntTSL 3 BASIC4.07□□□□□ -1.76
Cdhr3Q8BL00 Rpl9-ps9-201ENSMUST00000173020 573 ntBASIC4.07□□□□□ -1.76
Cdhr3Q8BL00 Gm28017-201ENSMUST00000183434 126 ntBASIC4.07□□□□□ -1.76
Cdhr3Q8BL00 Mir6344-201ENSMUST00000183462 104 ntBASIC4.07□□□□□ -1.76
Cdhr3Q8BL00 Mir7012-201ENSMUST00000183900 64 ntBASIC4.07□□□□□ -1.76
Cdhr3Q8BL00 Mir7653-201ENSMUST00000184358 61 ntBASIC4.07□□□□□ -1.76
Cdhr3Q8BL00 Gm28889-201ENSMUST00000185350 959 ntTSL 5 BASIC4.07□□□□□ -1.76
Cdhr3Q8BL00 Gm29426-202ENSMUST00000186564 536 ntTSL 5 BASIC4.07□□□□□ -1.76
Cdhr3Q8BL00 Gm9775-201ENSMUST00000189402 331 ntBASIC4.07□□□□□ -1.76
Cdhr3Q8BL00 Gm29000-207ENSMUST00000190152 1160 ntTSL 5 BASIC4.07□□□□□ -1.76
Cdhr3Q8BL00 Gm37223-202ENSMUST00000193592 490 ntTSL 3 BASIC4.07□□□□□ -1.76
Cdhr3Q8BL00 1700023G09Rik-202ENSMUST00000194671 308 ntTSL 3 BASIC4.07□□□□□ -1.76
Cdhr3Q8BL00 Gm44376-201ENSMUST00000197570 128 ntBASIC4.07□□□□□ -1.76
Cdhr3Q8BL00 AC133189.1-201ENSMUST00000198820 140 ntBASIC4.07□□□□□ -1.76
Cdhr3Q8BL00 1110060G06Rik-201ENSMUST00000200372 499 ntBASIC4.07□□□□□ -1.76
Cdhr3Q8BL00 Gm5886-201ENSMUST00000203420 641 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
Cdhr3Q8BL00 Gm19237-201ENSMUST00000205036 1132 ntBASIC4.07□□□□□ -1.76
Cdhr3Q8BL00 Snhg1-205ENSMUST00000205825 495 ntTSL 3 BASIC4.07□□□□□ -1.76
Cdhr3Q8BL00 Gm18306-201ENSMUST00000207338 569 ntBASIC4.07□□□□□ -1.76
Cdhr3Q8BL00 Gm45367-201ENSMUST00000210171 347 ntBASIC4.07□□□□□ -1.76
Cdhr3Q8BL00 AC153912.1-201ENSMUST00000217011 724 ntAPPRIS P1 TSL 3 BASIC4.07□□□□□ -1.76
Retrieved 100 of 76,532 protein–RNA pairs in 99.5 ms