Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 Nlrp4a-201ENSMUST00000068767 4259 ntAPPRIS P2 TSL 1 (best) BASIC5.61□□□□□ -1.51
Scaf4Q6PFF0 Olfr347-201ENSMUST00000078761 943 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
Scaf4Q6PFF0 Lamp3-201ENSMUST00000081880 3343 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Scaf4Q6PFF0 Vmn1r81-201ENSMUST00000086232 921 ntAPPRIS P2 BASIC5.61□□□□□ -1.51
Scaf4Q6PFF0 Cep70-201ENSMUST00000093795 2606 ntAPPRIS P2 TSL 1 (best) BASIC5.61□□□□□ -1.51
Scaf4Q6PFF0 Gm21286-201ENSMUST00000098035 545 ntBASIC5.61□□□□□ -1.51
Scaf4Q6PFF0 Fat1-201ENSMUST00000098796 14627 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Scaf4Q6PFF0 Gm44175-201ENSMUST00000204863 4256 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Scaf4Q6PFF0 AC192616.2-201ENSMUST00000221482 3841 ntBASIC5.61□□□□□ -1.51
Scaf4Q6PFF0 Zkscan8-204ENSMUST00000224362 6954 ntAPPRIS ALT2 BASIC5.61□□□□□ -1.51
Scaf4Q6PFF0 Vmn2r121-201ENSMUST00000094491 3062 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Scaf4Q6PFF0 Olfr635-202ENSMUST00000209473 8565 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
Scaf4Q6PFF0 Zpld1-202ENSMUST00000143914 2697 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Scaf4Q6PFF0 Vmn2r5-201ENSMUST00000170270 2484 ntAPPRIS P2 TSL 5 BASIC5.6□□□□□ -1.51
Scaf4Q6PFF0 Zp3r-202ENSMUST00000128128 1926 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
Scaf4Q6PFF0 Ash1l-201ENSMUST00000090933 11268 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Scaf4Q6PFF0 Gm10032-201ENSMUST00000071522 1887 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Scaf4Q6PFF0 Ppm1k-201ENSMUST00000042766 5560 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Scaf4Q6PFF0 Neb-201ENSMUST00000028320 10298 ntTSL 5 BASIC5.6□□□□□ -1.51
Scaf4Q6PFF0 Gm42992-201ENSMUST00000197043 6836 ntBASIC5.6□□□□□ -1.51
Scaf4Q6PFF0 Gm42496-201ENSMUST00000197976 3241 ntBASIC5.6□□□□□ -1.51
Scaf4Q6PFF0 Olfr969-202ENSMUST00000213266 1597 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
Scaf4Q6PFF0 Naip2-201ENSMUST00000067975 4709 ntAPPRIS P2 TSL 1 (best) BASIC5.6□□□□□ -1.51
Scaf4Q6PFF0 Tmem45a2-201ENSMUST00000067173 3073 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
Scaf4Q6PFF0 Gm336-201ENSMUST00000186376 1480 ntBASIC5.6□□□□□ -1.51
Scaf4Q6PFF0 Olfr1131-203ENSMUST00000216756 1459 ntTSL 3 BASIC5.6□□□□□ -1.51
Scaf4Q6PFF0 4921524L21Rik-201ENSMUST00000044829 1480 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Scaf4Q6PFF0 Ighv1-19-201ENSMUST00000103505 348 ntAPPRIS ALT2 BASIC5.6□□□□□ -1.51
Scaf4Q6PFF0 Gm24434-201ENSMUST00000104081 132 ntBASIC5.6□□□□□ -1.51
Scaf4Q6PFF0 Gm14308-202ENSMUST00000117267 777 ntTSL 3 BASIC5.6□□□□□ -1.51
Scaf4Q6PFF0 Gm14863-201ENSMUST00000119648 307 ntBASIC5.6□□□□□ -1.51
Scaf4Q6PFF0 Gm11472-201ENSMUST00000121305 556 ntBASIC5.6□□□□□ -1.51
Scaf4Q6PFF0 Cyp2j7-ps3-201ENSMUST00000121405 206 ntBASIC5.6□□□□□ -1.51
Scaf4Q6PFF0 2310044K18Rik-201ENSMUST00000125131 618 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Scaf4Q6PFF0 4930405D11Rik-201ENSMUST00000132218 568 ntTSL 3 BASIC5.6□□□□□ -1.51
Scaf4Q6PFF0 Tmem216-205ENSMUST00000145210 774 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Scaf4Q6PFF0 Tmem216-206ENSMUST00000154383 927 ntAPPRIS P1 TSL 3 BASIC5.6□□□□□ -1.51
Scaf4Q6PFF0 Gm26170-201ENSMUST00000158419 148 ntBASIC5.6□□□□□ -1.51
Scaf4Q6PFF0 Gm16311-201ENSMUST00000161939 702 ntTSL 3 BASIC5.6□□□□□ -1.51
Scaf4Q6PFF0 Olfr756-ps1-201ENSMUST00000173450 928 ntBASIC5.6□□□□□ -1.51
Scaf4Q6PFF0 Gm27342-201ENSMUST00000183530 109 ntBASIC5.6□□□□□ -1.51
Scaf4Q6PFF0 Gm29540-201ENSMUST00000188207 337 ntTSL 3 BASIC5.6□□□□□ -1.51
Scaf4Q6PFF0 1700108F19Rik-203ENSMUST00000188798 619 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Scaf4Q6PFF0 6430573P05Rik-201ENSMUST00000192562 508 ntTSL 5 BASIC5.6□□□□□ -1.51
Scaf4Q6PFF0 Gm40348-201ENSMUST00000199648 452 ntTSL 3 BASIC5.6□□□□□ -1.51
Scaf4Q6PFF0 Gm45368-201ENSMUST00000209323 703 ntTSL 5 BASIC5.6□□□□□ -1.51
Scaf4Q6PFF0 Ifitm6-202ENSMUST00000209328 678 ntAPPRIS P2 TSL 5 BASIC5.6□□□□□ -1.51
Scaf4Q6PFF0 AC149586.1-201ENSMUST00000222647 645 ntTSL 3 BASIC5.6□□□□□ -1.51
Scaf4Q6PFF0 AC174797.3-202ENSMUST00000224578 587 ntBASIC5.6□□□□□ -1.51
Scaf4Q6PFF0 AC137117.1-201ENSMUST00000226912 441 ntBASIC5.6□□□□□ -1.51
Scaf4Q6PFF0 Olfr697-201ENSMUST00000050541 1047 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Scaf4Q6PFF0 Olfr103-201ENSMUST00000058826 942 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Scaf4Q6PFF0 Fam229b-201ENSMUST00000063204 745 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Scaf4Q6PFF0 Tas2r123-201ENSMUST00000071696 1002 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Scaf4Q6PFF0 Mir7b-201ENSMUST00000083557 111 ntBASIC5.6□□□□□ -1.51
Scaf4Q6PFF0 Fam183b-202ENSMUST00000094156 567 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Scaf4Q6PFF0 Cox11-202ENSMUST00000099960 773 ntAPPRIS ALT2 TSL 2 BASIC5.6□□□□□ -1.51
Scaf4Q6PFF0 Dgkk-201ENSMUST00000067410 7155 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Scaf4Q6PFF0 Gm19335-201ENSMUST00000195836 2069 ntBASIC5.6□□□□□ -1.51
Scaf4Q6PFF0 Il1rapl2-201ENSMUST00000075471 2061 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Scaf4Q6PFF0 Gm38264-201ENSMUST00000194850 2032 ntBASIC5.6□□□□□ -1.51
Scaf4Q6PFF0 Serpinb9f-201ENSMUST00000075515 1912 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Scaf4Q6PFF0 Lingo2-210ENSMUST00000164772 3562 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Scaf4Q6PFF0 Angel2-201ENSMUST00000027947 3562 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Scaf4Q6PFF0 Spef2-206ENSMUST00000208854 7038 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
Scaf4Q6PFF0 B020004J07Rik-201ENSMUST00000084386 1695 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Scaf4Q6PFF0 Vmn1r196-204ENSMUST00000228382 6525 ntAPPRIS P2 BASIC5.59□□□□□ -1.51
Scaf4Q6PFF0 Olfr1138-202ENSMUST00000214573 1611 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Scaf4Q6PFF0 Gm2539-201ENSMUST00000180720 2411 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Scaf4Q6PFF0 Olfr183-203ENSMUST00000213465 2200 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Scaf4Q6PFF0 Gm42819-201ENSMUST00000199630 5121 ntBASIC5.59□□□□□ -1.51
Scaf4Q6PFF0 AC116726.1-201ENSMUST00000215028 3497 ntBASIC5.59□□□□□ -1.51
Scaf4Q6PFF0 Usp26-202ENSMUST00000114869 4133 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Scaf4Q6PFF0 Mme-205ENSMUST00000194134 8039 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Scaf4Q6PFF0 Gm13245-201ENSMUST00000119646 260 ntBASIC5.59□□□□□ -1.51
Scaf4Q6PFF0 Gm16016-201ENSMUST00000120831 550 ntBASIC5.59□□□□□ -1.51
Scaf4Q6PFF0 Gm15551-201ENSMUST00000132762 535 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Scaf4Q6PFF0 Magea9-ps-201ENSMUST00000140655 732 ntBASIC5.59□□□□□ -1.51
Scaf4Q6PFF0 Gm12414-201ENSMUST00000150794 494 ntTSL 5 BASIC5.59□□□□□ -1.51
Scaf4Q6PFF0 Gm26106-201ENSMUST00000157254 228 ntBASIC5.59□□□□□ -1.51
Scaf4Q6PFF0 Gm24767-201ENSMUST00000158509 95 ntBASIC5.59□□□□□ -1.51
Scaf4Q6PFF0 Gm16125-201ENSMUST00000159003 339 ntBASIC5.59□□□□□ -1.51
Scaf4Q6PFF0 Gm6872-201ENSMUST00000165001 700 ntBASIC5.59□□□□□ -1.51
Scaf4Q6PFF0 Magea9-ps-202ENSMUST00000167328 899 ntBASIC5.59□□□□□ -1.51
Scaf4Q6PFF0 Gm17054-201ENSMUST00000169811 259 ntBASIC5.59□□□□□ -1.51
Scaf4Q6PFF0 Vmn1r88-201ENSMUST00000171783 951 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
Scaf4Q6PFF0 Gm7271-201ENSMUST00000172369 519 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Scaf4Q6PFF0 Obox4-ps33-201ENSMUST00000176649 1139 ntBASIC5.59□□□□□ -1.51
Scaf4Q6PFF0 Gm24418-201ENSMUST00000177597 79 ntBASIC5.59□□□□□ -1.51
Scaf4Q6PFF0 Obox4-ps15-201ENSMUST00000178057 1140 ntBASIC5.59□□□□□ -1.51
Scaf4Q6PFF0 Obox4-ps19-201ENSMUST00000178284 1140 ntBASIC5.59□□□□□ -1.51
Scaf4Q6PFF0 Gm22166-201ENSMUST00000178419 121 ntBASIC5.59□□□□□ -1.51
Scaf4Q6PFF0 Tex50-202ENSMUST00000178511 954 ntAPPRIS P1 TSL 3 BASIC5.59□□□□□ -1.51
Scaf4Q6PFF0 Gm24639-201ENSMUST00000178518 79 ntBASIC5.59□□□□□ -1.51
Scaf4Q6PFF0 Gm23076-201ENSMUST00000179082 79 ntBASIC5.59□□□□□ -1.51
Scaf4Q6PFF0 Gm25077-201ENSMUST00000179157 79 ntBASIC5.59□□□□□ -1.51
Scaf4Q6PFF0 Gm23288-201ENSMUST00000179213 121 ntBASIC5.59□□□□□ -1.51
Scaf4Q6PFF0 Obox4-ps20-201ENSMUST00000179591 1140 ntBASIC5.59□□□□□ -1.51
Scaf4Q6PFF0 Obox4-ps21-201ENSMUST00000179856 1140 ntBASIC5.59□□□□□ -1.51
Scaf4Q6PFF0 4930434B07Rik-201ENSMUST00000190254 1020 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 77.9 ms