Protein–RNA interactions for Protein: Q5SNZ0

Ccdc88a, Girdin, mousemouse

Predictions only

Length 1,873 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88aQ5SNZ0 Gm16378-201ENSMUST00000179168 342 ntBASIC5.09□□□□□ -1.6
Ccdc88aQ5SNZ0 2310001H17Rik-203ENSMUST00000181517 3981 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
Ccdc88aQ5SNZ0 Gm3434-202ENSMUST00000184421 521 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
Ccdc88aQ5SNZ0 Gm43049-202ENSMUST00000198942 559 ntTSL 2 BASIC5.09□□□□□ -1.6
Ccdc88aQ5SNZ0 A230057D06Rik-203ENSMUST00000208953 3357 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
Ccdc88aQ5SNZ0 AL590503.1-201ENSMUST00000222053 321 ntBASIC5.09□□□□□ -1.6
Ccdc88aQ5SNZ0 AC129202.3-201ENSMUST00000224413 733 ntBASIC5.09□□□□□ -1.6
Ccdc88aQ5SNZ0 Gtpbp8-201ENSMUST00000023348 836 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
Ccdc88aQ5SNZ0 Vmn1r236-201ENSMUST00000066998 1121 ntAPPRIS P1 BASIC5.09□□□□□ -1.6
Ccdc88aQ5SNZ0 Gm10042-201ENSMUST00000079884 78 ntBASIC5.09□□□□□ -1.6
Ccdc88aQ5SNZ0 4930512M02Rik-201ENSMUST00000081896 715 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
Ccdc88aQ5SNZ0 Mir26a-2-201ENSMUST00000083496 84 ntBASIC5.09□□□□□ -1.6
Ccdc88aQ5SNZ0 Ptprd-218ENSMUST00000174180 5694 ntTSL 5 BASIC5.09□□□□□ -1.6
Ccdc88aQ5SNZ0 Olfr1262-202ENSMUST00000111508 6068 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
Ccdc88aQ5SNZ0 Zfp184-205ENSMUST00000176511 2703 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Ccdc88aQ5SNZ0 Btbd35f17-201ENSMUST00000105014 1960 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
Ccdc88aQ5SNZ0 Gm37011-201ENSMUST00000195543 2935 ntBASIC5.08□□□□□ -1.6
Ccdc88aQ5SNZ0 Gm38057-201ENSMUST00000195551 3203 ntBASIC5.08□□□□□ -1.6
Ccdc88aQ5SNZ0 Gm38152-201ENSMUST00000195389 3566 ntBASIC5.08□□□□□ -1.6
Ccdc88aQ5SNZ0 4930503E14Rik-201ENSMUST00000100688 1287 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Ccdc88aQ5SNZ0 Ighv3-3-201ENSMUST00000103476 296 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
Ccdc88aQ5SNZ0 Mir105-201ENSMUST00000104655 80 ntBASIC5.08□□□□□ -1.6
Ccdc88aQ5SNZ0 Gm13550-201ENSMUST00000118185 525 ntBASIC5.08□□□□□ -1.6
Ccdc88aQ5SNZ0 Gm12724-201ENSMUST00000140196 665 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Ccdc88aQ5SNZ0 Gm1979-202ENSMUST00000170224 666 ntTSL 5 BASIC5.08□□□□□ -1.6
Ccdc88aQ5SNZ0 Gm20641-201ENSMUST00000176069 615 ntTSL 3 BASIC5.08□□□□□ -1.6
Ccdc88aQ5SNZ0 Gm21698-201ENSMUST00000178487 666 ntTSL 5 BASIC5.08□□□□□ -1.6
Ccdc88aQ5SNZ0 Gm29133-201ENSMUST00000189155 885 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Ccdc88aQ5SNZ0 Gm43037-201ENSMUST00000196808 250 ntBASIC5.08□□□□□ -1.6
Ccdc88aQ5SNZ0 Olfr1295-201ENSMUST00000207283 1282 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
Ccdc88aQ5SNZ0 Olfr231-202ENSMUST00000214446 5204 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Ccdc88aQ5SNZ0 Gm44847-201ENSMUST00000207104 1991 ntBASIC5.08□□□□□ -1.6
Ccdc88aQ5SNZ0 Gm14305-203ENSMUST00000108983 1497 ntAPPRIS P1 TSL 3 BASIC5.08□□□□□ -1.6
Ccdc88aQ5SNZ0 Gm2026-202ENSMUST00000109008 1497 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Ccdc88aQ5SNZ0 Gm4724-202ENSMUST00000109046 1497 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Ccdc88aQ5SNZ0 Gm4631-201ENSMUST00000109050 1494 ntTSL 5 BASIC5.08□□□□□ -1.6
Ccdc88aQ5SNZ0 Gm14434-203ENSMUST00000122097 1497 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Ccdc88aQ5SNZ0 Gm11007-202ENSMUST00000178120 1497 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Ccdc88aQ5SNZ0 Gm2007-202ENSMUST00000178133 1497 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Ccdc88aQ5SNZ0 Gm11007-203ENSMUST00000185834 1494 ntTSL 5 BASIC5.08□□□□□ -1.6
Ccdc88aQ5SNZ0 Gm2007-203ENSMUST00000189494 1494 ntTSL 5 BASIC5.08□□□□□ -1.6
Ccdc88aQ5SNZ0 Olfr414-202ENSMUST00000192358 4526 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
Ccdc88aQ5SNZ0 Olfr2-205ENSMUST00000214105 5798 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Ccdc88aQ5SNZ0 Satl1-201ENSMUST00000026601 2412 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Ccdc88aQ5SNZ0 Gm32444-201ENSMUST00000195147 3511 ntBASIC5.08□□□□□ -1.6
Ccdc88aQ5SNZ0 Rif1-201ENSMUST00000112693 8509 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Ccdc88aQ5SNZ0 Vmn1r81-204ENSMUST00000228482 13495 ntAPPRIS ALT2 BASIC5.08□□□□□ -1.6
Ccdc88aQ5SNZ0 Adam26a-201ENSMUST00000049577 2489 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Ccdc88aQ5SNZ0 Gm15624-203ENSMUST00000204811 3402 ntBASIC5.08□□□□□ -1.6
Ccdc88aQ5SNZ0 Arhgef6-201ENSMUST00000033468 4569 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Ccdc88aQ5SNZ0 Olfr1215-203ENSMUST00000216271 2608 ntAPPRIS P1 TSL 3 BASIC5.07□□□□□ -1.6
Ccdc88aQ5SNZ0 Gabrb1-201ENSMUST00000031122 13737 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Ccdc88aQ5SNZ0 Gm11782-201ENSMUST00000131675 2804 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Ccdc88aQ5SNZ0 Olfr1507-203ENSMUST00000206062 2803 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
Ccdc88aQ5SNZ0 Gm13162-201ENSMUST00000121481 454 ntBASIC5.07□□□□□ -1.6
Ccdc88aQ5SNZ0 Chrna1os-201ENSMUST00000125413 680 ntTSL 3 BASIC5.07□□□□□ -1.6
Ccdc88aQ5SNZ0 Il18-202ENSMUST00000180021 702 ntAPPRIS P2 TSL 1 (best) BASIC5.07□□□□□ -1.6
Ccdc88aQ5SNZ0 Gm28619-201ENSMUST00000185889 622 ntTSL 5 BASIC5.07□□□□□ -1.6
Ccdc88aQ5SNZ0 Gm28994-201ENSMUST00000188556 621 ntTSL 5 BASIC5.07□□□□□ -1.6
Ccdc88aQ5SNZ0 Gm29428-201ENSMUST00000190086 409 ntBASIC5.07□□□□□ -1.6
Ccdc88aQ5SNZ0 Gm28314-201ENSMUST00000191276 345 ntBASIC5.07□□□□□ -1.6
Ccdc88aQ5SNZ0 Gm37231-201ENSMUST00000191716 621 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Ccdc88aQ5SNZ0 Gm38159-202ENSMUST00000194145 621 ntTSL 5 BASIC5.07□□□□□ -1.6
Ccdc88aQ5SNZ0 Gm37734-201ENSMUST00000194294 621 ntTSL 5 BASIC5.07□□□□□ -1.6
Ccdc88aQ5SNZ0 Gm36941-202ENSMUST00000194799 621 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Ccdc88aQ5SNZ0 Gm38363-202ENSMUST00000195029 622 ntTSL 5 BASIC5.07□□□□□ -1.6
Ccdc88aQ5SNZ0 Gm37378-202ENSMUST00000195795 621 ntTSL 5 BASIC5.07□□□□□ -1.6
Ccdc88aQ5SNZ0 Gm37130-202ENSMUST00000195874 621 ntTSL 5 BASIC5.07□□□□□ -1.6
Ccdc88aQ5SNZ0 Gm43559-201ENSMUST00000198755 466 ntBASIC5.07□□□□□ -1.6
Ccdc88aQ5SNZ0 Gm42579-201ENSMUST00000200512 734 ntBASIC5.07□□□□□ -1.6
Ccdc88aQ5SNZ0 AC091783.5-201ENSMUST00000224928 671 ntBASIC5.07□□□□□ -1.6
Ccdc88aQ5SNZ0 Hypm-201ENSMUST00000044987 581 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Ccdc88aQ5SNZ0 Olfr273-201ENSMUST00000051520 1059 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Ccdc88aQ5SNZ0 Il18-201ENSMUST00000059081 702 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
Ccdc88aQ5SNZ0 Olfr996-201ENSMUST00000077075 1068 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Ccdc88aQ5SNZ0 Gm23302-201ENSMUST00000082710 100 ntBASIC5.07□□□□□ -1.6
Ccdc88aQ5SNZ0 Gm37776-201ENSMUST00000193471 2497 ntBASIC5.07□□□□□ -1.6
Ccdc88aQ5SNZ0 Olfr1328-202ENSMUST00000215312 5038 ntAPPRIS ALT1 TSL 5 BASIC5.07□□□□□ -1.6
Ccdc88aQ5SNZ0 4930579C12Rik-202ENSMUST00000187015 3676 ntTSL 2 BASIC5.07□□□□□ -1.6
Ccdc88aQ5SNZ0 Fam122b-202ENSMUST00000114838 3536 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
Ccdc88aQ5SNZ0 Vmn1r34-206ENSMUST00000228498 3078 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Ccdc88aQ5SNZ0 Nsd1-201ENSMUST00000099490 12784 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Ccdc88aQ5SNZ0 5033423K11Rik-201ENSMUST00000117311 787 ntBASIC5.07□□□□□ -1.6
Ccdc88aQ5SNZ0 Gm8200-201ENSMUST00000122390 222 ntBASIC5.07□□□□□ -1.6
Ccdc88aQ5SNZ0 Gm25965-201ENSMUST00000157170 93 ntBASIC5.07□□□□□ -1.6
Ccdc88aQ5SNZ0 Gm4248-201ENSMUST00000196905 316 ntBASIC5.07□□□□□ -1.6
Ccdc88aQ5SNZ0 Fbxw23-201ENSMUST00000198015 425 ntTSL 2 BASIC5.07□□□□□ -1.6
Ccdc88aQ5SNZ0 Gm35702-201ENSMUST00000198653 511 ntBASIC5.07□□□□□ -1.6
Ccdc88aQ5SNZ0 Gm18510-201ENSMUST00000219335 1096 ntBASIC5.07□□□□□ -1.6
Ccdc88aQ5SNZ0 Rps24-205ENSMUST00000223999 525 ntAPPRIS ALT1 BASIC5.07□□□□□ -1.6
Ccdc88aQ5SNZ0 Vmn1r28-203ENSMUST00000228678 909 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Ccdc88aQ5SNZ0 Olfr1325-201ENSMUST00000054541 948 ntAPPRIS P2 BASIC5.07□□□□□ -1.6
Ccdc88aQ5SNZ0 Olfr690-201ENSMUST00000061920 1062 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Ccdc88aQ5SNZ0 Olfr986-201ENSMUST00000062229 1016 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Ccdc88aQ5SNZ0 Vmn1r49-201ENSMUST00000071865 933 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Ccdc88aQ5SNZ0 Olfr1490-201ENSMUST00000080162 951 ntAPPRIS P2 BASIC5.07□□□□□ -1.6
Ccdc88aQ5SNZ0 Gm42492-201ENSMUST00000195780 2915 ntBASIC5.07□□□□□ -1.6
Ccdc88aQ5SNZ0 Tfpi2-201ENSMUST00000031674 1530 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Ccdc88aQ5SNZ0 Cyp7a1-201ENSMUST00000029905 4172 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Ccdc88aQ5SNZ0 Npat-201ENSMUST00000035850 6062 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 90.9 ms