Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Pagr1a-201ENSMUST00000162069 422 ntTSL 3 BASIC10.75□□□□□ -0.69
Trim41Q5NCC3 Gm3091-201ENSMUST00000163408 484 ntBASIC10.75□□□□□ -0.69
Trim41Q5NCC3 1700027A15Rik-201ENSMUST00000185768 321 ntTSL 5 BASIC10.75□□□□□ -0.69
Trim41Q5NCC3 Gm37658-201ENSMUST00000192672 315 ntBASIC10.75□□□□□ -0.69
Trim41Q5NCC3 Gm19739-201ENSMUST00000195941 153 ntBASIC10.75□□□□□ -0.69
Trim41Q5NCC3 Gm9173-201ENSMUST00000198054 400 ntBASIC10.75□□□□□ -0.69
Trim41Q5NCC3 Chaer1-201ENSMUST00000201649 651 ntTSL 5 BASIC10.75□□□□□ -0.69
Trim41Q5NCC3 Gm19060-201ENSMUST00000201959 421 ntBASIC10.75□□□□□ -0.69
Trim41Q5NCC3 Zfp813-ps-202ENSMUST00000204773 618 ntTSL 5 BASIC10.75□□□□□ -0.69
Trim41Q5NCC3 AC108846.2-201ENSMUST00000214925 731 ntTSL 5 BASIC10.75□□□□□ -0.69
Trim41Q5NCC3 Olfr1136-201ENSMUST00000077471 1067 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
Trim41Q5NCC3 Fktn-203ENSMUST00000128667 6080 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trim41Q5NCC3 Zfp607a-202ENSMUST00000205534 3511 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trim41Q5NCC3 Zfp874a-202ENSMUST00000075255 3238 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trim41Q5NCC3 Mybpc1-202ENSMUST00000121629 3922 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trim41Q5NCC3 Sox6-210ENSMUST00000206034 8668 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
Trim41Q5NCC3 Gm14390-201ENSMUST00000117505 1695 ntBASIC10.75□□□□□ -0.69
Trim41Q5NCC3 Gm38284-201ENSMUST00000194803 4539 ntBASIC10.75□□□□□ -0.69
Trim41Q5NCC3 B130034C11Rik-201ENSMUST00000175717 1401 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Trim41Q5NCC3 Gm38036-201ENSMUST00000194586 3564 ntBASIC10.75□□□□□ -0.69
Trim41Q5NCC3 RMST_1.1-210ENSMUST00000219606 2891 ntTSL 5 BASIC10.75□□□□□ -0.69
Trim41Q5NCC3 Vmn2r98-201ENSMUST00000170424 2574 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Trim41Q5NCC3 Stk4-202ENSMUST00000088291 4098 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Trim41Q5NCC3 Mlh3-201ENSMUST00000019378 5463 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trim41Q5NCC3 Gabpb2-202ENSMUST00000098873 8272 ntAPPRIS P2 TSL 5 BASIC10.74□□□□□ -0.69
Trim41Q5NCC3 Gm17137-201ENSMUST00000164106 4371 ntBASIC10.74□□□□□ -0.69
Trim41Q5NCC3 Amd1-201ENSMUST00000099945 3204 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trim41Q5NCC3 Vmn2r-ps44-201ENSMUST00000174053 2412 ntBASIC10.74□□□□□ -0.69
Trim41Q5NCC3 Ptprz1-206ENSMUST00000202579 6871 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Trim41Q5NCC3 Nsd2-202ENSMUST00000066854 6919 ntAPPRIS P4 TSL 2 BASIC10.74□□□□□ -0.69
Trim41Q5NCC3 Gm11833-201ENSMUST00000118393 853 ntBASIC10.74□□□□□ -0.69
Trim41Q5NCC3 Gm13228-201ENSMUST00000118937 634 ntBASIC10.74□□□□□ -0.69
Trim41Q5NCC3 Gm15106-201ENSMUST00000119691 821 ntBASIC10.74□□□□□ -0.69
Trim41Q5NCC3 Gm12693-201ENSMUST00000121965 483 ntBASIC10.74□□□□□ -0.69
Trim41Q5NCC3 Gm24295-201ENSMUST00000158298 131 ntBASIC10.74□□□□□ -0.69
Trim41Q5NCC3 Klra5-204ENSMUST00000169901 792 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Trim41Q5NCC3 Vmn2r-ps70-201ENSMUST00000174636 302 ntBASIC10.74□□□□□ -0.69
Trim41Q5NCC3 Gm8816-201ENSMUST00000182280 1163 ntBASIC10.74□□□□□ -0.69
Trim41Q5NCC3 Mir6992-201ENSMUST00000183342 109 ntBASIC10.74□□□□□ -0.69
Trim41Q5NCC3 Gm18505-201ENSMUST00000187360 790 ntBASIC10.74□□□□□ -0.69
Trim41Q5NCC3 Gm37511-201ENSMUST00000192901 294 ntBASIC10.74□□□□□ -0.69
Trim41Q5NCC3 Gm42832-201ENSMUST00000196361 745 ntBASIC10.74□□□□□ -0.69
Trim41Q5NCC3 Obox4-ps32-201ENSMUST00000196512 537 ntBASIC10.74□□□□□ -0.69
Trim41Q5NCC3 Gm43541-201ENSMUST00000197208 581 ntBASIC10.74□□□□□ -0.69
Trim41Q5NCC3 AC164161.1-201ENSMUST00000214076 639 ntBASIC10.74□□□□□ -0.69
Trim41Q5NCC3 AL672194.1-201ENSMUST00000224841 603 ntBASIC10.74□□□□□ -0.69
Trim41Q5NCC3 CT010498.1-201ENSMUST00000225382 546 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
Trim41Q5NCC3 AC154527.1-201ENSMUST00000225809 242 ntBASIC10.74□□□□□ -0.69
Trim41Q5NCC3 Olfr123-201ENSMUST00000054748 930 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
Trim41Q5NCC3 Olfr1336-201ENSMUST00000056120 945 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
Trim41Q5NCC3 Olfr1174-ps-201ENSMUST00000213348 1738 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Trim41Q5NCC3 Cyp2c70-201ENSMUST00000051846 1717 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trim41Q5NCC3 4930509K18Rik-201ENSMUST00000144039 1810 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Trim41Q5NCC3 AC129085.2-201ENSMUST00000223763 2800 ntBASIC10.74□□□□□ -0.69
Trim41Q5NCC3 Adam3-209ENSMUST00000171438 2501 ntAPPRIS P1 TSL 2 BASIC10.74□□□□□ -0.69
Trim41Q5NCC3 Prom1-205ENSMUST00000165909 4089 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trim41Q5NCC3 Gm17529-201ENSMUST00000180738 3093 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Trim41Q5NCC3 Abca4-207ENSMUST00000141135 3606 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Trim41Q5NCC3 Gm9602-201ENSMUST00000163325 2062 ntAPPRIS P5 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trim41Q5NCC3 Gm8356-201ENSMUST00000163636 2062 ntAPPRIS P5 TSL 5 BASIC10.73□□□□□ -0.69
Trim41Q5NCC3 AC121844.2-201ENSMUST00000219067 2066 ntBASIC10.73□□□□□ -0.69
Trim41Q5NCC3 Gm42544-201ENSMUST00000197868 3242 ntBASIC10.73□□□□□ -0.69
Trim41Q5NCC3 Vrk2-202ENSMUST00000109504 1642 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trim41Q5NCC3 Apbb2-210ENSMUST00000160870 6526 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trim41Q5NCC3 Zscan4d-201ENSMUST00000067210 2272 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trim41Q5NCC3 Adh7-201ENSMUST00000090171 3432 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trim41Q5NCC3 AC192333.5-201ENSMUST00000224620 2350 ntBASIC10.73□□□□□ -0.69
Trim41Q5NCC3 Wdr49-201ENSMUST00000193989 2413 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Trim41Q5NCC3 Bbs12-201ENSMUST00000057975 2433 ntAPPRIS P1 TSL 2 BASIC10.73□□□□□ -0.69
Trim41Q5NCC3 Agl-203ENSMUST00000159742 4344 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Trim41Q5NCC3 Spink2-203ENSMUST00000121825 643 ntAPPRIS ALT2 TSL 3 BASIC10.73□□□□□ -0.69
Trim41Q5NCC3 Gm23864-201ENSMUST00000177607 107 ntBASIC10.73□□□□□ -0.69
Trim41Q5NCC3 Gm5731-201ENSMUST00000190969 481 ntBASIC10.73□□□□□ -0.69
Trim41Q5NCC3 Gm29038-201ENSMUST00000191543 678 ntBASIC10.73□□□□□ -0.69
Trim41Q5NCC3 Ighv3-7-201ENSMUST00000193370 348 ntBASIC10.73□□□□□ -0.69
Trim41Q5NCC3 Gm45507-201ENSMUST00000210611 519 ntTSL 5 BASIC10.73□□□□□ -0.69
Trim41Q5NCC3 Gm9237-201ENSMUST00000221499 548 ntBASIC10.73□□□□□ -0.69
Trim41Q5NCC3 Olfr146-201ENSMUST00000073671 1061 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
Trim41Q5NCC3 Clasp1-210ENSMUST00000188710 10265 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
Trim41Q5NCC3 AC152922.2-201ENSMUST00000213353 3879 ntBASIC10.73□□□□□ -0.69
Trim41Q5NCC3 Ift80-202ENSMUST00000107812 4063 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Trim41Q5NCC3 Asap1-208ENSMUST00000176014 3435 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
Trim41Q5NCC3 Zfand6-202ENSMUST00000178385 1538 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trim41Q5NCC3 Wdr12-201ENSMUST00000027173 10012 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trim41Q5NCC3 Nlrp1a-202ENSMUST00000108518 3767 ntAPPRIS P2 TSL 5 BASIC10.72□□□□□ -0.69
Trim41Q5NCC3 Cxcr6-202ENSMUST00000216072 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trim41Q5NCC3 Golgb1-203ENSMUST00000114812 11012 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Trim41Q5NCC3 Akap9-201ENSMUST00000044492 13123 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trim41Q5NCC3 Gm10636-201ENSMUST00000197639 2419 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Trim41Q5NCC3 Vmn2r9-201ENSMUST00000170419 2547 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Trim41Q5NCC3 Bsph2-201ENSMUST00000108526 532 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trim41Q5NCC3 Gm25185-201ENSMUST00000157754 96 ntBASIC10.72□□□□□ -0.69
Trim41Q5NCC3 Snrpe-203ENSMUST00000166291 360 ntTSL 3 BASIC10.72□□□□□ -0.69
Trim41Q5NCC3 Obox3-ps8-201ENSMUST00000177182 960 ntBASIC10.72□□□□□ -0.69
Trim41Q5NCC3 1700015G11Rik-204ENSMUST00000190307 255 ntAPPRIS ALT2 TSL 3 BASIC10.72□□□□□ -0.69
Trim41Q5NCC3 Gm30097-201ENSMUST00000193581 447 ntTSL 5 BASIC10.72□□□□□ -0.69
Trim41Q5NCC3 Gm2147-201ENSMUST00000193588 639 ntBASIC10.72□□□□□ -0.69
Trim41Q5NCC3 Gm6719-201ENSMUST00000202067 335 ntBASIC10.72□□□□□ -0.69
Trim41Q5NCC3 Gm43941-201ENSMUST00000203303 1073 ntBASIC10.72□□□□□ -0.69
Trim41Q5NCC3 AC162931.1-201ENSMUST00000214184 267 ntBASIC10.72□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 92.3 ms