Protein–RNA interactions for Protein: Q3UWA4

Trim40, Tripartite motif-containing protein 40, mousemouse

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40Q3UWA4 AC174776.2-201ENSMUST00000222561 405 ntBASIC4.35□□□□□ -1.71
Trim40Q3UWA4 Gm7768-201ENSMUST00000222988 597 ntBASIC4.35□□□□□ -1.71
Trim40Q3UWA4 AL807824.1-201ENSMUST00000223151 183 ntBASIC4.35□□□□□ -1.71
Trim40Q3UWA4 AC154510.1-201ENSMUST00000223925 737 ntBASIC4.35□□□□□ -1.71
Trim40Q3UWA4 AC154527.3-201ENSMUST00000225519 989 ntBASIC4.35□□□□□ -1.71
Trim40Q3UWA4 AL589696.1-201ENSMUST00000225711 330 ntBASIC4.35□□□□□ -1.71
Trim40Q3UWA4 Resp18-201ENSMUST00000039534 748 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Trim40Q3UWA4 Rybp-ps-201ENSMUST00000069489 681 ntBASIC4.35□□□□□ -1.71
Trim40Q3UWA4 Olfr881-201ENSMUST00000074611 948 ntBASIC4.35□□□□□ -1.71
Trim40Q3UWA4 Olfr476-201ENSMUST00000077249 933 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
Trim40Q3UWA4 Gm23459-201ENSMUST00000083259 131 ntBASIC4.35□□□□□ -1.71
Trim40Q3UWA4 Gm26163-201ENSMUST00000083792 178 ntBASIC4.35□□□□□ -1.71
Trim40Q3UWA4 Gm25682-201ENSMUST00000083942 164 ntBASIC4.35□□□□□ -1.71
Trim40Q3UWA4 Olfr725-201ENSMUST00000089844 1110 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
Trim40Q3UWA4 Defb26-201ENSMUST00000099205 561 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Trim40Q3UWA4 Gm10780-201ENSMUST00000099459 285 ntBASIC4.35□□□□□ -1.71
Trim40Q3UWA4 Olfr1249-201ENSMUST00000099769 957 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
Trim40Q3UWA4 Olfr998-202ENSMUST00000215083 1399 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
Trim40Q3UWA4 Gm21854-202ENSMUST00000190391 1480 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
Trim40Q3UWA4 Gm35191-201ENSMUST00000200925 2475 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
Trim40Q3UWA4 Il13ra2-202ENSMUST00000112827 1536 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Trim40Q3UWA4 Vmn1r84-205ENSMUST00000228653 2769 ntAPPRIS ALT2 BASIC4.35□□□□□ -1.71
Trim40Q3UWA4 AC159476.1-201ENSMUST00000215914 1668 ntBASIC4.35□□□□□ -1.71
Trim40Q3UWA4 Gm37397-201ENSMUST00000194579 2842 ntBASIC4.35□□□□□ -1.71
Trim40Q3UWA4 Gm8402-201ENSMUST00000118183 1770 ntBASIC4.35□□□□□ -1.71
Trim40Q3UWA4 Gm8383-201ENSMUST00000121179 1770 ntBASIC4.35□□□□□ -1.71
Trim40Q3UWA4 Gm13084-201ENSMUST00000075045 1805 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
Trim40Q3UWA4 Olfr655-203ENSMUST00000215538 2012 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
Trim40Q3UWA4 Fsd1l-203ENSMUST00000132151 7467 ntAPPRIS P2 TSL 5 BASIC4.34□□□□□ -1.71
Trim40Q3UWA4 Olfr351-202ENSMUST00000213676 3426 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
Trim40Q3UWA4 Eya4-208ENSMUST00000220299 3615 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
Trim40Q3UWA4 Zfp808-201ENSMUST00000099449 2571 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
Trim40Q3UWA4 Gm38125-201ENSMUST00000194136 3438 ntBASIC4.34□□□□□ -1.71
Trim40Q3UWA4 Gm25758-201ENSMUST00000103987 129 ntBASIC4.34□□□□□ -1.71
Trim40Q3UWA4 Gm14786-201ENSMUST00000117127 944 ntBASIC4.34□□□□□ -1.71
Trim40Q3UWA4 Gm12062-201ENSMUST00000117533 259 ntBASIC4.34□□□□□ -1.71
Trim40Q3UWA4 Rpl23a-ps14-201ENSMUST00000118777 424 ntBASIC4.34□□□□□ -1.71
Trim40Q3UWA4 Gm14784-201ENSMUST00000121604 663 ntBASIC4.34□□□□□ -1.71
Trim40Q3UWA4 Gm13874-201ENSMUST00000130680 809 ntTSL 5 BASIC4.34□□□□□ -1.71
Trim40Q3UWA4 4930440I19Rik-201ENSMUST00000144728 992 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
Trim40Q3UWA4 Gm22378-201ENSMUST00000157481 111 ntBASIC4.34□□□□□ -1.71
Trim40Q3UWA4 Gm17081-201ENSMUST00000167363 478 ntBASIC4.34□□□□□ -1.71
Trim40Q3UWA4 Gm44501-201ENSMUST00000167713 1229 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.71
Trim40Q3UWA4 Gm24111-201ENSMUST00000175491 97 ntBASIC4.34□□□□□ -1.71
Trim40Q3UWA4 Trav6-4-202ENSMUST00000184650 338 ntAPPRIS ALT2 BASIC4.34□□□□□ -1.71
Trim40Q3UWA4 Gm28083-201ENSMUST00000186533 538 ntTSL 5 BASIC4.34□□□□□ -1.71
Trim40Q3UWA4 1700111N16Rik-201ENSMUST00000188663 1133 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
Trim40Q3UWA4 Gm29527-201ENSMUST00000190722 622 ntTSL 5 BASIC4.34□□□□□ -1.71
Trim40Q3UWA4 7420461P10Rik-203ENSMUST00000193898 545 ntAPPRIS ALT2 TSL 3 BASIC4.34□□□□□ -1.71
Trim40Q3UWA4 Gm36971-201ENSMUST00000195244 378 ntTSL 5 BASIC4.34□□□□□ -1.71
Trim40Q3UWA4 Gm42593-201ENSMUST00000198469 377 ntBASIC4.34□□□□□ -1.71
Trim40Q3UWA4 Gm43700-201ENSMUST00000200967 316 ntTSL 5 BASIC4.34□□□□□ -1.71
Trim40Q3UWA4 Ociad2-206ENSMUST00000202012 876 ntTSL 5 BASIC4.34□□□□□ -1.71
Trim40Q3UWA4 Gm44665-201ENSMUST00000205381 251 ntBASIC4.34□□□□□ -1.71
Trim40Q3UWA4 Olfr840-ps1-201ENSMUST00000211827 917 ntBASIC4.34□□□□□ -1.71
Trim40Q3UWA4 AC167250.1-202ENSMUST00000213629 672 ntTSL 3 BASIC4.34□□□□□ -1.71
Trim40Q3UWA4 Gm19181-201ENSMUST00000218891 940 ntBASIC4.34□□□□□ -1.71
Trim40Q3UWA4 AC101709.1-201ENSMUST00000220276 909 ntTSL 5 BASIC4.34□□□□□ -1.71
Trim40Q3UWA4 CR974592.1-201ENSMUST00000220422 574 ntBASIC4.34□□□□□ -1.71
Trim40Q3UWA4 AC173345.3-201ENSMUST00000221245 1093 ntBASIC4.34□□□□□ -1.71
Trim40Q3UWA4 AC192333.6-201ENSMUST00000224565 725 ntBASIC4.34□□□□□ -1.71
Trim40Q3UWA4 4930578G10Rik-201ENSMUST00000068158 614 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
Trim40Q3UWA4 n-R5s36-201ENSMUST00000082998 119 ntBASIC4.34□□□□□ -1.71
Trim40Q3UWA4 Gm26072-201ENSMUST00000083135 107 ntBASIC4.34□□□□□ -1.71
Trim40Q3UWA4 Gm23677-201ENSMUST00000083156 104 ntBASIC4.34□□□□□ -1.71
Trim40Q3UWA4 Wfdc17-201ENSMUST00000092836 533 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
Trim40Q3UWA4 Olfr1053-201ENSMUST00000099897 942 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
Trim40Q3UWA4 Olfr987-202ENSMUST00000111598 1418 ntAPPRIS P1 TSL 3 BASIC4.34□□□□□ -1.71
Trim40Q3UWA4 Gm28687-201ENSMUST00000187203 1494 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
Trim40Q3UWA4 Gm29373-201ENSMUST00000190660 1494 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
Trim40Q3UWA4 Olfr955-203ENSMUST00000220176 1452 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
Trim40Q3UWA4 Zfp329-202ENSMUST00000108546 2577 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
Trim40Q3UWA4 Olfr32-205ENSMUST00000215659 2998 ntAPPRIS P1 TSL 3 BASIC4.34□□□□□ -1.72
Trim40Q3UWA4 Slfn10-ps-201ENSMUST00000100716 3621 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
Trim40Q3UWA4 Vmn1r47-203ENSMUST00000227811 6792 ntAPPRIS P1 BASIC4.34□□□□□ -1.72
Trim40Q3UWA4 Zfp143-201ENSMUST00000084727 3003 ntAPPRIS ALT1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Trim40Q3UWA4 Nxf3-201ENSMUST00000080929 2978 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Trim40Q3UWA4 Brcc3-202ENSMUST00000114074 2473 ntAPPRIS P2 TSL 1 (best) BASIC4.33□□□□□ -1.72
Trim40Q3UWA4 Gm29048-202ENSMUST00000190399 1601 ntTSL 5 BASIC4.33□□□□□ -1.72
Trim40Q3UWA4 Klri2-201ENSMUST00000050385 3913 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Trim40Q3UWA4 Gm9733-201ENSMUST00000108361 618 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Trim40Q3UWA4 Gm14995-201ENSMUST00000117135 391 ntBASIC4.33□□□□□ -1.72
Trim40Q3UWA4 Gm13386-201ENSMUST00000117677 124 ntBASIC4.33□□□□□ -1.72
Trim40Q3UWA4 Gm9432-201ENSMUST00000117810 759 ntBASIC4.33□□□□□ -1.72
Trim40Q3UWA4 Gm15361-201ENSMUST00000119320 444 ntBASIC4.33□□□□□ -1.72
Trim40Q3UWA4 Olfr1397-ps1-201ENSMUST00000121388 962 ntBASIC4.33□□□□□ -1.72
Trim40Q3UWA4 Gm11350-201ENSMUST00000121436 870 ntBASIC4.33□□□□□ -1.72
Trim40Q3UWA4 Gm15212-201ENSMUST00000122403 466 ntBASIC4.33□□□□□ -1.72
Trim40Q3UWA4 Gm14288-202ENSMUST00000123863 267 ntAPPRIS ALT2 TSL 2 BASIC4.33□□□□□ -1.72
Trim40Q3UWA4 Gm12092-201ENSMUST00000125194 600 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
Trim40Q3UWA4 Gm22261-201ENSMUST00000158691 324 ntBASIC4.33□□□□□ -1.72
Trim40Q3UWA4 Gm16545-201ENSMUST00000161968 463 ntBASIC4.33□□□□□ -1.72
Trim40Q3UWA4 Vmn1r160-201ENSMUST00000171745 924 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
Trim40Q3UWA4 Esp15-201ENSMUST00000178929 1168 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Trim40Q3UWA4 Gm17777-201ENSMUST00000189740 1276 ntBASIC4.33□□□□□ -1.72
Trim40Q3UWA4 Gm19231-201ENSMUST00000193212 830 ntBASIC4.33□□□□□ -1.72
Trim40Q3UWA4 Gm38509-201ENSMUST00000197492 1150 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
Trim40Q3UWA4 Sult2a7-202ENSMUST00000209744 792 ntTSL 5 BASIC4.33□□□□□ -1.72
Trim40Q3UWA4 Gm18645-202ENSMUST00000212222 760 ntBASIC4.33□□□□□ -1.72
Trim40Q3UWA4 Gm31786-202ENSMUST00000212428 676 ntTSL 3 BASIC4.33□□□□□ -1.72
Retrieved 100 of 76,532 protein–RNA pairs in 92.4 ms