Protein–RNA interactions for Protein: Q3UDK1

Trafd1, TRAF-type zinc finger domain-containing protein 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trafd1Q3UDK1 Cftr-201ENSMUST00000045706 6303 ntAPPRIS P2 TSL 1 (best) BASIC4.5□□□□□ -1.69
Trafd1Q3UDK1 Gm6634-201ENSMUST00000180497 1804 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
Trafd1Q3UDK1 Gm732-201ENSMUST00000101290 1661 ntAPPRIS P2 TSL 1 (best) BASIC4.5□□□□□ -1.69
Trafd1Q3UDK1 Gm42968-201ENSMUST00000198578 1372 ntBASIC4.5□□□□□ -1.69
Trafd1Q3UDK1 Gm9921-201ENSMUST00000173293 4399 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
Trafd1Q3UDK1 Vmn1r21-201ENSMUST00000203310 1779 ntAPPRIS P1 TSL 2 BASIC4.5□□□□□ -1.69
Trafd1Q3UDK1 AC139754.3-201ENSMUST00000220444 1627 ntBASIC4.5□□□□□ -1.69
Trafd1Q3UDK1 Ankrd31-201ENSMUST00000207464 5146 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
Trafd1Q3UDK1 1700017N19Rik-206ENSMUST00000190386 1483 ntTSL 5 BASIC4.49□□□□□ -1.69
Trafd1Q3UDK1 AC152414.1-201ENSMUST00000218784 2287 ntTSL 5 BASIC4.49□□□□□ -1.69
Trafd1Q3UDK1 Gm13477-201ENSMUST00000121620 2687 ntBASIC4.49□□□□□ -1.69
Trafd1Q3UDK1 A530030E21Rik-201ENSMUST00000199551 1310 ntBASIC4.49□□□□□ -1.69
Trafd1Q3UDK1 Gm43009-201ENSMUST00000199979 3566 ntBASIC4.49□□□□□ -1.69
Trafd1Q3UDK1 Stag2-201ENSMUST00000069619 5825 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
Trafd1Q3UDK1 Cyp2j12-201ENSMUST00000097972 1675 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
Trafd1Q3UDK1 Olfr2-203ENSMUST00000208147 6178 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
Trafd1Q3UDK1 Defb5-201ENSMUST00000110763 207 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
Trafd1Q3UDK1 Rps15a-ps4-201ENSMUST00000119415 392 ntBASIC4.49□□□□□ -1.69
Trafd1Q3UDK1 Gm11448-201ENSMUST00000120427 450 ntBASIC4.49□□□□□ -1.69
Trafd1Q3UDK1 Gm12466-201ENSMUST00000121199 620 ntBASIC4.49□□□□□ -1.69
Trafd1Q3UDK1 Gm14500-201ENSMUST00000121647 113 ntBASIC4.49□□□□□ -1.69
Trafd1Q3UDK1 Gm15767-202ENSMUST00000153786 544 ntTSL 3 BASIC4.49□□□□□ -1.69
Trafd1Q3UDK1 Gm13617-201ENSMUST00000155350 675 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
Trafd1Q3UDK1 Gm6904-201ENSMUST00000168702 898 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
Trafd1Q3UDK1 Vmn1r-ps67-201ENSMUST00000173843 691 ntBASIC4.49□□□□□ -1.69
Trafd1Q3UDK1 1700031A10Rik-201ENSMUST00000174380 656 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
Trafd1Q3UDK1 Gm22859-201ENSMUST00000174978 122 ntBASIC4.49□□□□□ -1.69
Trafd1Q3UDK1 Gm20663-201ENSMUST00000176647 474 ntTSL 3 BASIC4.49□□□□□ -1.69
Trafd1Q3UDK1 Aste1-207ENSMUST00000176940 1151 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
Trafd1Q3UDK1 Gm28116-201ENSMUST00000189064 387 ntBASIC4.49□□□□□ -1.69
Trafd1Q3UDK1 1700047N06Rik-201ENSMUST00000194474 920 ntBASIC4.49□□□□□ -1.69
Trafd1Q3UDK1 Gm44474-201ENSMUST00000196525 127 ntBASIC4.49□□□□□ -1.69
Trafd1Q3UDK1 Gm43316-201ENSMUST00000197252 1295 ntBASIC4.49□□□□□ -1.69
Trafd1Q3UDK1 Gm19096-201ENSMUST00000209705 766 ntBASIC4.49□□□□□ -1.69
Trafd1Q3UDK1 Olfr864-ps1-201ENSMUST00000212664 930 ntBASIC4.49□□□□□ -1.69
Trafd1Q3UDK1 Gm18997-201ENSMUST00000216353 822 ntBASIC4.49□□□□□ -1.69
Trafd1Q3UDK1 CT009764.1-201ENSMUST00000222260 483 ntBASIC4.49□□□□□ -1.69
Trafd1Q3UDK1 Capza3-201ENSMUST00000043797 1222 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
Trafd1Q3UDK1 Gm25099-201ENSMUST00000093716 116 ntBASIC4.49□□□□□ -1.69
Trafd1Q3UDK1 Slc22a22-201ENSMUST00000022995 2015 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
Trafd1Q3UDK1 AC126439.1-201ENSMUST00000226772 2104 ntBASIC4.49□□□□□ -1.69
Trafd1Q3UDK1 Gm42876-201ENSMUST00000196989 3215 ntBASIC4.49□□□□□ -1.69
Trafd1Q3UDK1 Olfr350-203ENSMUST00000215100 2086 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
Trafd1Q3UDK1 Gm38106-201ENSMUST00000194107 2534 ntBASIC4.48□□□□□ -1.69
Trafd1Q3UDK1 Stag2-202ENSMUST00000115072 5955 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
Trafd1Q3UDK1 Gm38407-202ENSMUST00000219221 2391 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
Trafd1Q3UDK1 Gm45223-201ENSMUST00000207037 5138 ntBASIC4.48□□□□□ -1.69
Trafd1Q3UDK1 Vmn2r3-201ENSMUST00000170244 2670 ntAPPRIS P2 TSL 5 BASIC4.48□□□□□ -1.69
Trafd1Q3UDK1 Olfr1123-203ENSMUST00000216208 5245 ntAPPRIS ALT2 TSL 2 BASIC4.48□□□□□ -1.69
Trafd1Q3UDK1 Gm10552-201ENSMUST00000113396 372 ntBASIC4.48□□□□□ -1.69
Trafd1Q3UDK1 Gm5133-201ENSMUST00000118940 1255 ntBASIC4.48□□□□□ -1.69
Trafd1Q3UDK1 1810065E05Rik-201ENSMUST00000013797 926 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
Trafd1Q3UDK1 Tpo-203ENSMUST00000155263 664 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
Trafd1Q3UDK1 Gm22277-201ENSMUST00000157204 277 ntBASIC4.48□□□□□ -1.69
Trafd1Q3UDK1 Gm24689-201ENSMUST00000157760 104 ntBASIC4.48□□□□□ -1.69
Trafd1Q3UDK1 Gm25605-201ENSMUST00000158364 124 ntBASIC4.48□□□□□ -1.69
Trafd1Q3UDK1 D6Ertd474e-203ENSMUST00000160188 683 ntTSL 3 BASIC4.48□□□□□ -1.69
Trafd1Q3UDK1 4930556I23Rik-201ENSMUST00000160659 560 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
Trafd1Q3UDK1 4930519F16Rik-206ENSMUST00000183292 800 ntBASIC4.48□□□□□ -1.69
Trafd1Q3UDK1 Ly6c1-203ENSMUST00000185200 540 ntTSL 2 BASIC4.48□□□□□ -1.69
Trafd1Q3UDK1 Gm5058-201ENSMUST00000187331 463 ntBASIC4.48□□□□□ -1.69
Trafd1Q3UDK1 Nabp1-207ENSMUST00000188204 972 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
Trafd1Q3UDK1 Gm34583-202ENSMUST00000202537 451 ntTSL 2 BASIC4.48□□□□□ -1.69
Trafd1Q3UDK1 Gm45032-201ENSMUST00000205375 520 ntBASIC4.48□□□□□ -1.69
Trafd1Q3UDK1 Olfr1434-203ENSMUST00000208197 1229 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
Trafd1Q3UDK1 Gm20946-201ENSMUST00000212367 461 ntBASIC4.48□□□□□ -1.69
Trafd1Q3UDK1 AC156832.3-201ENSMUST00000215591 435 ntBASIC4.48□□□□□ -1.69
Trafd1Q3UDK1 AC125190.2-201ENSMUST00000221160 497 ntBASIC4.48□□□□□ -1.69
Trafd1Q3UDK1 Gm7045-201ENSMUST00000221466 605 ntBASIC4.48□□□□□ -1.69
Trafd1Q3UDK1 Prss37-201ENSMUST00000031967 1049 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
Trafd1Q3UDK1 Olfr492-201ENSMUST00000079865 945 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
Trafd1Q3UDK1 Nfyc-202ENSMUST00000097906 1008 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
Trafd1Q3UDK1 Olfr1162-201ENSMUST00000099837 945 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
Trafd1Q3UDK1 Olfr1133-201ENSMUST00000099855 942 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
Trafd1Q3UDK1 1700017N19Rik-204ENSMUST00000188736 1709 ntTSL 5 BASIC4.48□□□□□ -1.69
Trafd1Q3UDK1 Igsf10-202ENSMUST00000193455 8484 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
Trafd1Q3UDK1 Olfr1131-203ENSMUST00000216756 1459 ntTSL 3 BASIC4.48□□□□□ -1.69
Trafd1Q3UDK1 Gm38235-201ENSMUST00000194600 4952 ntBASIC4.48□□□□□ -1.69
Trafd1Q3UDK1 Pak3-204ENSMUST00000112865 8484 ntAPPRIS P3 TSL 5 BASIC4.48□□□□□ -1.69
Trafd1Q3UDK1 Olfr220-202ENSMUST00000194229 3286 ntAPPRIS P1 TSL 3 BASIC4.48□□□□□ -1.69
Trafd1Q3UDK1 Olfr690-202ENSMUST00000211006 2048 ntAPPRIS P1 TSL 2 BASIC4.48□□□□□ -1.69
Trafd1Q3UDK1 Scn7a-201ENSMUST00000042792 7338 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
Trafd1Q3UDK1 Olfr685-203ENSMUST00000214712 3326 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
Trafd1Q3UDK1 Olfr1140-201ENSMUST00000214723 1421 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
Trafd1Q3UDK1 Elavl2-202ENSMUST00000102799 3840 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
Trafd1Q3UDK1 Vmn1r66-201ENSMUST00000060374 1524 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
Trafd1Q3UDK1 Gm38152-201ENSMUST00000195389 3566 ntBASIC4.47□□□□□ -1.69
Trafd1Q3UDK1 Gm22498-201ENSMUST00000104497 86 ntBASIC4.47□□□□□ -1.69
Trafd1Q3UDK1 Olfr800-201ENSMUST00000104903 940 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
Trafd1Q3UDK1 Gm14610-201ENSMUST00000118358 966 ntBASIC4.47□□□□□ -1.69
Trafd1Q3UDK1 Gm13745-201ENSMUST00000121994 527 ntBASIC4.47□□□□□ -1.69
Trafd1Q3UDK1 Gm14095-201ENSMUST00000134264 516 ntTSL 3 BASIC4.47□□□□□ -1.69
Trafd1Q3UDK1 Gm15735-201ENSMUST00000136187 514 ntTSL 3 BASIC4.47□□□□□ -1.69
Trafd1Q3UDK1 Gm13180-201ENSMUST00000141222 440 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
Trafd1Q3UDK1 Mllt3-207ENSMUST00000148059 422 ntTSL 5 BASIC4.47□□□□□ -1.69
Trafd1Q3UDK1 Gm16285-201ENSMUST00000162999 347 ntBASIC4.47□□□□□ -1.69
Trafd1Q3UDK1 Gm23633-201ENSMUST00000175293 119 ntBASIC4.47□□□□□ -1.69
Trafd1Q3UDK1 Gm21850-201ENSMUST00000179792 359 ntBASIC4.47□□□□□ -1.69
Trafd1Q3UDK1 A330048O09Rik-201ENSMUST00000180777 672 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
Trafd1Q3UDK1 Hmgb1-ps8-201ENSMUST00000181542 626 ntBASIC4.47□□□□□ -1.69
Retrieved 100 of 76,532 protein–RNA pairs in 82.3 ms