Protein–RNA interactions for Protein: Q3TIX9

Usp39, U4/U6.U5 tri-snRNP-associated protein 2, mousemouse

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp39Q3TIX9 Hgf-203ENSMUST00000196645 2189 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
Usp39Q3TIX9 Olfr843-203ENSMUST00000214267 7071 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
Usp39Q3TIX9 Btbd35f24-201ENSMUST00000178080 1941 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
Usp39Q3TIX9 Ncoa7-203ENSMUST00000213836 2989 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
Usp39Q3TIX9 Gm7739-201ENSMUST00000221131 1560 ntBASIC5.25□□□□□ -1.57
Usp39Q3TIX9 Ctsm-202ENSMUST00000223778 1905 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
Usp39Q3TIX9 Ireb2-201ENSMUST00000034843 5770 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Usp39Q3TIX9 9630010A21Rik-201ENSMUST00000192348 2703 ntBASIC5.25□□□□□ -1.57
Usp39Q3TIX9 AC153912.2-201ENSMUST00000215840 2015 ntBASIC5.24□□□□□ -1.57
Usp39Q3TIX9 Vmn1r213-202ENSMUST00000227573 3515 ntAPPRIS ALT2 BASIC5.24□□□□□ -1.57
Usp39Q3TIX9 Gm14404-201ENSMUST00000119117 1660 ntBASIC5.24□□□□□ -1.57
Usp39Q3TIX9 Aadacl3-201ENSMUST00000105749 3153 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
Usp39Q3TIX9 Abca13-201ENSMUST00000042740 16011 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
Usp39Q3TIX9 Fam26d-201ENSMUST00000048052 3711 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Usp39Q3TIX9 Zfp606-205ENSMUST00000209403 2211 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
Usp39Q3TIX9 Ktn1-214ENSMUST00000188553 3918 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
Usp39Q3TIX9 Ube2u-202ENSMUST00000133493 1537 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Usp39Q3TIX9 Olfr104-ps-201ENSMUST00000178766 1972 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
Usp39Q3TIX9 C230071H17Rik-201ENSMUST00000196044 2973 ntBASIC5.24□□□□□ -1.57
Usp39Q3TIX9 Olfr1268-ps1-201ENSMUST00000117787 2501 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
Usp39Q3TIX9 Lrrc39-201ENSMUST00000029573 3087 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Usp39Q3TIX9 Btbd35f14-201ENSMUST00000105117 1701 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
Usp39Q3TIX9 1700022I11Rik-201ENSMUST00000030163 3727 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Usp39Q3TIX9 Usp46-202ENSMUST00000119154 4738 ntTSL 5 BASIC5.24□□□□□ -1.57
Usp39Q3TIX9 Gm2348-201ENSMUST00000108782 300 ntBASIC5.24□□□□□ -1.57
Usp39Q3TIX9 Gm15766-201ENSMUST00000118025 813 ntBASIC5.24□□□□□ -1.57
Usp39Q3TIX9 Gm14899-201ENSMUST00000118673 548 ntBASIC5.24□□□□□ -1.57
Usp39Q3TIX9 Gm12067-201ENSMUST00000119755 1148 ntBASIC5.24□□□□□ -1.57
Usp39Q3TIX9 Gm12873-201ENSMUST00000119988 422 ntBASIC5.24□□□□□ -1.57
Usp39Q3TIX9 Gm3835-201ENSMUST00000120752 403 ntBASIC5.24□□□□□ -1.57
Usp39Q3TIX9 Gm13533-201ENSMUST00000121104 177 ntBASIC5.24□□□□□ -1.57
Usp39Q3TIX9 Gm11804-201ENSMUST00000121663 468 ntBASIC5.24□□□□□ -1.57
Usp39Q3TIX9 Clec5a-203ENSMUST00000129948 858 ntAPPRIS P4 TSL 1 (best) BASIC5.24□□□□□ -1.57
Usp39Q3TIX9 Gm14012-201ENSMUST00000136025 677 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Usp39Q3TIX9 Gm13189-201ENSMUST00000138462 252 ntTSL 3 BASIC5.24□□□□□ -1.57
Usp39Q3TIX9 Gm15747-201ENSMUST00000141216 460 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Usp39Q3TIX9 Gm22390-201ENSMUST00000157588 325 ntBASIC5.24□□□□□ -1.57
Usp39Q3TIX9 Gm22261-201ENSMUST00000158691 324 ntBASIC5.24□□□□□ -1.57
Usp39Q3TIX9 Gm16125-201ENSMUST00000159003 339 ntBASIC5.24□□□□□ -1.57
Usp39Q3TIX9 Gm2855-201ENSMUST00000166765 456 ntBASIC5.24□□□□□ -1.57
Usp39Q3TIX9 Gm7346-201ENSMUST00000169661 476 ntBASIC5.24□□□□□ -1.57
Usp39Q3TIX9 Gm11392-201ENSMUST00000181419 710 ntBASIC5.24□□□□□ -1.57
Usp39Q3TIX9 1110046J04Rik-203ENSMUST00000181800 777 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Usp39Q3TIX9 Gm27855-201ENSMUST00000184122 128 ntBASIC5.24□□□□□ -1.57
Usp39Q3TIX9 1700028M03Rik-201ENSMUST00000185938 476 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Usp39Q3TIX9 Gm7967-203ENSMUST00000191409 1049 ntTSL 5 BASIC5.24□□□□□ -1.57
Usp39Q3TIX9 Gm18296-201ENSMUST00000192475 783 ntBASIC5.24□□□□□ -1.57
Usp39Q3TIX9 Gm42564-201ENSMUST00000196013 582 ntTSL 5 BASIC5.24□□□□□ -1.57
Usp39Q3TIX9 1700052H01Rik-202ENSMUST00000196973 429 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Usp39Q3TIX9 Gm9317-201ENSMUST00000197055 862 ntBASIC5.24□□□□□ -1.57
Usp39Q3TIX9 4930443G03Rik-201ENSMUST00000203475 1282 ntBASIC5.24□□□□□ -1.57
Usp39Q3TIX9 Gm44214-201ENSMUST00000204153 606 ntBASIC5.24□□□□□ -1.57
Usp39Q3TIX9 AC151971.3-201ENSMUST00000214694 404 ntBASIC5.24□□□□□ -1.57
Usp39Q3TIX9 Gm8125-201ENSMUST00000216602 738 ntBASIC5.24□□□□□ -1.57
Usp39Q3TIX9 AC161245.1-201ENSMUST00000217207 740 ntTSL 3 BASIC5.24□□□□□ -1.57
Usp39Q3TIX9 AC140209.1-204ENSMUST00000226736 739 ntBASIC5.24□□□□□ -1.57
Usp39Q3TIX9 AC154806.3-201ENSMUST00000227376 439 ntBASIC5.24□□□□□ -1.57
Usp39Q3TIX9 Gm22444-201ENSMUST00000093693 108 ntBASIC5.24□□□□□ -1.57
Usp39Q3TIX9 Olfr1220-201ENSMUST00000099789 1026 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
Usp39Q3TIX9 Olfr1216-201ENSMUST00000099800 936 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
Usp39Q3TIX9 Olfr1220-202ENSMUST00000099806 1201 ntAPPRIS P1 TSL 3 BASIC5.24□□□□□ -1.57
Usp39Q3TIX9 Arpp21-231ENSMUST00000178410 3419 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Usp39Q3TIX9 Kynu-203ENSMUST00000112826 1587 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Usp39Q3TIX9 Gm42658-201ENSMUST00000197199 1575 ntBASIC5.24□□□□□ -1.57
Usp39Q3TIX9 Gm20756-202ENSMUST00000201324 1565 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Usp39Q3TIX9 Zfp78-206ENSMUST00000208390 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
Usp39Q3TIX9 Olfr1328-202ENSMUST00000215312 5038 ntAPPRIS ALT1 TSL 5 BASIC5.24□□□□□ -1.57
Usp39Q3TIX9 Olfr1318-201ENSMUST00000058176 1690 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
Usp39Q3TIX9 Vmn2r88-202ENSMUST00000159674 3098 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
Usp39Q3TIX9 Gm42534-201ENSMUST00000196063 1754 ntBASIC5.24□□□□□ -1.57
Usp39Q3TIX9 Gm37628-201ENSMUST00000194644 5440 ntBASIC5.23□□□□□ -1.57
Usp39Q3TIX9 Ryr3-202ENSMUST00000091818 15410 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
Usp39Q3TIX9 Mapk10-204ENSMUST00000112848 6761 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Usp39Q3TIX9 Pfkfb2-202ENSMUST00000066863 4425 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
Usp39Q3TIX9 Gm37964-201ENSMUST00000192459 4905 ntBASIC5.23□□□□□ -1.57
Usp39Q3TIX9 Gm42860-201ENSMUST00000196492 3991 ntBASIC5.23□□□□□ -1.57
Usp39Q3TIX9 Ankrd49-202ENSMUST00000214456 3207 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Usp39Q3TIX9 Kcnu1-201ENSMUST00000098858 3536 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Usp39Q3TIX9 Gm24886-201ENSMUST00000104384 123 ntBASIC5.23□□□□□ -1.57
Usp39Q3TIX9 Gm15021-201ENSMUST00000117832 742 ntBASIC5.23□□□□□ -1.57
Usp39Q3TIX9 Olfr1379-ps1-201ENSMUST00000120726 1001 ntBASIC5.23□□□□□ -1.57
Usp39Q3TIX9 Gm11385-201ENSMUST00000121513 570 ntBASIC5.23□□□□□ -1.57
Usp39Q3TIX9 Gm15152-201ENSMUST00000121540 394 ntBASIC5.23□□□□□ -1.57
Usp39Q3TIX9 Gm11894-201ENSMUST00000121579 328 ntBASIC5.23□□□□□ -1.57
Usp39Q3TIX9 Xlr5e-ps-201ENSMUST00000122043 711 ntBASIC5.23□□□□□ -1.57
Usp39Q3TIX9 Ftx-201ENSMUST00000123841 673 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Usp39Q3TIX9 Gm13028-201ENSMUST00000128563 277 ntTSL 3 BASIC5.23□□□□□ -1.57
Usp39Q3TIX9 Gm13599-201ENSMUST00000134476 678 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Usp39Q3TIX9 1700016G14Rik-201ENSMUST00000136906 863 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Usp39Q3TIX9 Crem-216ENSMUST00000136961 807 ntTSL 5 BASIC5.23□□□□□ -1.57
Usp39Q3TIX9 Gm14651-201ENSMUST00000147192 442 ntBASIC5.23□□□□□ -1.57
Usp39Q3TIX9 Gm15892-201ENSMUST00000152627 439 ntTSL 2 BASIC5.23□□□□□ -1.57
Usp39Q3TIX9 Gm17154-201ENSMUST00000165748 431 ntBASIC5.23□□□□□ -1.57
Usp39Q3TIX9 Gm3170-201ENSMUST00000168753 850 ntBASIC5.23□□□□□ -1.57
Usp39Q3TIX9 Mir3062-201ENSMUST00000174986 105 ntBASIC5.23□□□□□ -1.57
Usp39Q3TIX9 Mir5101-201ENSMUST00000175181 83 ntBASIC5.23□□□□□ -1.57
Usp39Q3TIX9 Gm3348-201ENSMUST00000177813 850 ntBASIC5.23□□□□□ -1.57
Usp39Q3TIX9 Sult2a6-202ENSMUST00000184731 664 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Usp39Q3TIX9 Gm28238-201ENSMUST00000188102 383 ntTSL 5 BASIC5.23□□□□□ -1.57
Usp39Q3TIX9 1700031M16Rik-206ENSMUST00000191037 711 ntAPPRIS P5 TSL 3 BASIC5.23□□□□□ -1.57
Retrieved 100 of 76,532 protein–RNA pairs in 58.6 ms