Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Cts8-201ENSMUST00000021891 2505 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Col8a1Q00780 Tlr5-202ENSMUST00000191820 3818 ntAPPRIS ALT2 BASIC5.03□□□□□ -1.6
Col8a1Q00780 Gm37106-201ENSMUST00000193760 1532 ntBASIC5.03□□□□□ -1.6
Col8a1Q00780 Lgi1-209ENSMUST00000199812 2262 ntTSL 5 BASIC5.03□□□□□ -1.6
Col8a1Q00780 Gm8853-201ENSMUST00000198366 1344 ntBASIC5.03□□□□□ -1.6
Col8a1Q00780 Vmn2r85-201ENSMUST00000171811 3042 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Col8a1Q00780 Capn13-201ENSMUST00000095208 2614 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Col8a1Q00780 Vmn2r-ps44-201ENSMUST00000174053 2412 ntBASIC5.03□□□□□ -1.6
Col8a1Q00780 Gm732-201ENSMUST00000101290 1661 ntAPPRIS P2 TSL 1 (best) BASIC5.03□□□□□ -1.6
Col8a1Q00780 Gnpnat1-206ENSMUST00000227468 1490 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
Col8a1Q00780 Gm45520-201ENSMUST00000210109 2031 ntBASIC5.03□□□□□ -1.6
Col8a1Q00780 Vps50-203ENSMUST00000170873 3687 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Col8a1Q00780 Trmt10a-201ENSMUST00000040321 4025 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Col8a1Q00780 Clec1b-202ENSMUST00000112079 455 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Col8a1Q00780 Gm14995-201ENSMUST00000117135 391 ntBASIC5.03□□□□□ -1.6
Col8a1Q00780 Gm14918-201ENSMUST00000118153 268 ntBASIC5.03□□□□□ -1.6
Col8a1Q00780 Gm14842-201ENSMUST00000119577 269 ntBASIC5.03□□□□□ -1.6
Col8a1Q00780 Gm15490-201ENSMUST00000119894 387 ntBASIC5.03□□□□□ -1.6
Col8a1Q00780 Gm11909-201ENSMUST00000121424 759 ntBASIC5.03□□□□□ -1.6
Col8a1Q00780 Gm12399-201ENSMUST00000121475 446 ntBASIC5.03□□□□□ -1.6
Col8a1Q00780 Gm12322-201ENSMUST00000121605 389 ntBASIC5.03□□□□□ -1.6
Col8a1Q00780 Gm13077-201ENSMUST00000121941 484 ntBASIC5.03□□□□□ -1.6
Col8a1Q00780 Rrm2b-203ENSMUST00000137636 900 ntTSL 5 BASIC5.03□□□□□ -1.6
Col8a1Q00780 Gm16331-201ENSMUST00000144274 498 ntBASIC5.03□□□□□ -1.6
Col8a1Q00780 Gm14505-201ENSMUST00000145383 831 ntTSL 3 BASIC5.03□□□□□ -1.6
Col8a1Q00780 Gm13062-201ENSMUST00000151337 562 ntTSL 3 BASIC5.03□□□□□ -1.6
Col8a1Q00780 Gm16035-201ENSMUST00000153879 401 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Col8a1Q00780 C030037F17Rik-201ENSMUST00000155211 406 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Col8a1Q00780 Gm22076-201ENSMUST00000158601 84 ntBASIC5.03□□□□□ -1.6
Col8a1Q00780 Gm15970-201ENSMUST00000160623 834 ntBASIC5.03□□□□□ -1.6
Col8a1Q00780 Gm15946-201ENSMUST00000160654 423 ntBASIC5.03□□□□□ -1.6
Col8a1Q00780 Olfr756-ps1-201ENSMUST00000173450 928 ntBASIC5.03□□□□□ -1.6
Col8a1Q00780 Pantr1-203ENSMUST00000176154 514 ntTSL 5 BASIC5.03□□□□□ -1.6
Col8a1Q00780 Ranbp2-ps4-201ENSMUST00000183481 385 ntBASIC5.03□□□□□ -1.6
Col8a1Q00780 Mir6539-201ENSMUST00000183732 110 ntBASIC5.03□□□□□ -1.6
Col8a1Q00780 Gm5116-201ENSMUST00000187732 463 ntBASIC5.03□□□□□ -1.6
Col8a1Q00780 Gm29627-201ENSMUST00000187984 463 ntBASIC5.03□□□□□ -1.6
Col8a1Q00780 Gm29376-201ENSMUST00000189357 835 ntBASIC5.03□□□□□ -1.6
Col8a1Q00780 Gm37996-201ENSMUST00000191859 367 ntBASIC5.03□□□□□ -1.6
Col8a1Q00780 Gm38127-201ENSMUST00000191978 468 ntTSL 5 BASIC5.03□□□□□ -1.6
Col8a1Q00780 Gm37095-201ENSMUST00000195421 205 ntBASIC5.03□□□□□ -1.6
Col8a1Q00780 Gm9632-201ENSMUST00000195934 643 ntBASIC5.03□□□□□ -1.6
Col8a1Q00780 Gm9332-201ENSMUST00000198431 730 ntBASIC5.03□□□□□ -1.6
Col8a1Q00780 5033403H07Rik-203ENSMUST00000198580 467 ntTSL 2 BASIC5.03□□□□□ -1.6
Col8a1Q00780 Gbp2-ps-201ENSMUST00000198870 1269 ntBASIC5.03□□□□□ -1.6
Col8a1Q00780 Gm44132-201ENSMUST00000205142 151 ntBASIC5.03□□□□□ -1.6
Col8a1Q00780 Olfr717-ps1-201ENSMUST00000205589 556 ntBASIC5.03□□□□□ -1.6
Col8a1Q00780 Gm44927-201ENSMUST00000207573 716 ntBASIC5.03□□□□□ -1.6
Col8a1Q00780 Gm45368-201ENSMUST00000209323 703 ntTSL 5 BASIC5.03□□□□□ -1.6
Col8a1Q00780 Gm18644-201ENSMUST00000211458 815 ntBASIC5.03□□□□□ -1.6
Col8a1Q00780 Rpl17-ps2-201ENSMUST00000218101 532 ntBASIC5.03□□□□□ -1.6
Col8a1Q00780 4930563J15Rik-203ENSMUST00000219796 574 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Col8a1Q00780 Gm36372-201ENSMUST00000221011 778 ntTSL 5 BASIC5.03□□□□□ -1.6
Col8a1Q00780 Gm40271-201ENSMUST00000221752 422 ntTSL 3 BASIC5.03□□□□□ -1.6
Col8a1Q00780 CT030182.2-201ENSMUST00000223569 620 ntBASIC5.03□□□□□ -1.6
Col8a1Q00780 AC161252.2-201ENSMUST00000224978 374 ntBASIC5.03□□□□□ -1.6
Col8a1Q00780 AC160120.1-201ENSMUST00000227446 663 ntBASIC5.03□□□□□ -1.6
Col8a1Q00780 Olfr124-201ENSMUST00000053599 1122 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
Col8a1Q00780 Gm5341-201ENSMUST00000058881 489 ntBASIC5.03□□□□□ -1.6
Col8a1Q00780 Gm7204-201ENSMUST00000062591 600 ntBASIC5.03□□□□□ -1.6
Col8a1Q00780 Olfr1431-201ENSMUST00000072316 939 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
Col8a1Q00780 Gm23459-201ENSMUST00000083259 131 ntBASIC5.03□□□□□ -1.6
Col8a1Q00780 Olfr561-201ENSMUST00000098217 1071 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
Col8a1Q00780 Olfr1065-201ENSMUST00000213789 2154 ntAPPRIS P1 TSL 3 BASIC5.03□□□□□ -1.6
Col8a1Q00780 Mrpl1-201ENSMUST00000036437 3431 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Col8a1Q00780 Gm43302-201ENSMUST00000050011 4310 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Col8a1Q00780 Tnrc6a-201ENSMUST00000094053 8183 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Col8a1Q00780 Kynu-203ENSMUST00000112826 1587 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Col8a1Q00780 Olfr301-201ENSMUST00000174362 1937 ntAPPRIS P1 TSL 3 BASIC5.03□□□□□ -1.6
Col8a1Q00780 Gm26742-201ENSMUST00000181829 3340 ntTSL 5 BASIC5.03□□□□□ -1.6
Col8a1Q00780 Vmn1r34-207ENSMUST00000228647 2979 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
Col8a1Q00780 Trpm3-204ENSMUST00000099564 3653 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Col8a1Q00780 Vmn1r31-203ENSMUST00000177318 2076 ntAPPRIS P2 TSL 2 BASIC5.03□□□□□ -1.6
Col8a1Q00780 Serpina3b-201ENSMUST00000085052 2070 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Col8a1Q00780 AC155298.1-201ENSMUST00000225350 3250 ntBASIC5.03□□□□□ -1.6
Col8a1Q00780 Gm14895-201ENSMUST00000121858 1361 ntBASIC5.03□□□□□ -1.6
Col8a1Q00780 Gm5427-201ENSMUST00000217680 2591 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Col8a1Q00780 Mrgprc2-ps-201ENSMUST00000188039 1516 ntBASIC5.02□□□□□ -1.61
Col8a1Q00780 Gm9314-201ENSMUST00000199881 1528 ntBASIC5.02□□□□□ -1.61
Col8a1Q00780 Sytl2-202ENSMUST00000107210 3718 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
Col8a1Q00780 Gabrq-201ENSMUST00000033711 2000 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
Col8a1Q00780 Naip2-203ENSMUST00000167986 4356 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
Col8a1Q00780 AC159244.3-201ENSMUST00000222887 3153 ntBASIC5.02□□□□□ -1.61
Col8a1Q00780 Fbxw14-201ENSMUST00000112041 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
Col8a1Q00780 AA792892-202ENSMUST00000202253 1980 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Col8a1Q00780 3110099E03Rik-202ENSMUST00000134580 2644 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Col8a1Q00780 9530036O11Rik-202ENSMUST00000181202 2926 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Col8a1Q00780 Zranb3-201ENSMUST00000086614 4210 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Col8a1Q00780 Morc2b-202ENSMUST00000131954 3857 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
Col8a1Q00780 Amd1-201ENSMUST00000099945 3204 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Col8a1Q00780 Wap-201ENSMUST00000102910 551 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Col8a1Q00780 Atp5j-203ENSMUST00000114193 680 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
Col8a1Q00780 Gm14711-201ENSMUST00000117056 217 ntBASIC5.02□□□□□ -1.61
Col8a1Q00780 Vmn1r-ps112-201ENSMUST00000117475 544 ntBASIC5.02□□□□□ -1.61
Col8a1Q00780 Gm568-201ENSMUST00000135777 506 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Col8a1Q00780 Gm26486-201ENSMUST00000158021 110 ntBASIC5.02□□□□□ -1.61
Col8a1Q00780 Dnaja1-ps-201ENSMUST00000162103 642 ntBASIC5.02□□□□□ -1.61
Col8a1Q00780 Ear-ps5-201ENSMUST00000164700 463 ntBASIC5.02□□□□□ -1.61
Col8a1Q00780 Smim9-203ENSMUST00000165080 414 ntAPPRIS P1 TSL 3 BASIC5.02□□□□□ -1.61
Col8a1Q00780 Gm3216-201ENSMUST00000166927 486 ntBASIC5.02□□□□□ -1.61
Retrieved 100 of 76,532 protein–RNA pairs in 199 ms