Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Olfr1192-ps1-201ENSMUST00000120518 2738 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
PrkdcP97313 B130024G19Rik-203ENSMUST00000190320 5451 ntTSL 5 BASIC2.94□□□□□ -1.94
PrkdcP97313 Gm25595-201ENSMUST00000102273 97 ntBASIC2.94□□□□□ -1.94
PrkdcP97313 Gm5938-201ENSMUST00000114030 775 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
PrkdcP97313 Gm14875-201ENSMUST00000120881 319 ntBASIC2.94□□□□□ -1.94
PrkdcP97313 Gm7281-201ENSMUST00000160010 543 ntBASIC2.94□□□□□ -1.94
PrkdcP97313 Gm28591-201ENSMUST00000185259 183 ntBASIC2.94□□□□□ -1.94
PrkdcP97313 Gm43649-201ENSMUST00000196596 391 ntBASIC2.94□□□□□ -1.94
PrkdcP97313 Gm44475-201ENSMUST00000204041 424 ntBASIC2.94□□□□□ -1.94
PrkdcP97313 Gm18537-201ENSMUST00000205709 989 ntBASIC2.94□□□□□ -1.94
PrkdcP97313 4930405J17Rik-201ENSMUST00000214323 620 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
PrkdcP97313 Mir370-201ENSMUST00000083499 79 ntBASIC2.94□□□□□ -1.94
PrkdcP97313 Gm16523-202ENSMUST00000203640 4750 ntBASIC2.94□□□□□ -1.94
PrkdcP97313 Zfp462-203ENSMUST00000098070 10465 ntAPPRIS P2 TSL 5 BASIC2.94□□□□□ -1.94
PrkdcP97313 Erc2-208ENSMUST00000210924 4871 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
PrkdcP97313 Tnr-202ENSMUST00000192069 12202 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
PrkdcP97313 Gm38243-201ENSMUST00000194737 1567 ntBASIC2.94□□□□□ -1.94
PrkdcP97313 Vmn1r171-203ENSMUST00000226321 3067 ntAPPRIS ALT2 BASIC2.93□□□□□ -1.94
PrkdcP97313 AL589737.1-201ENSMUST00000221163 2763 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
PrkdcP97313 Rlf-203ENSMUST00000168615 6585 ntAPPRIS ALT2 TSL 5 BASIC2.93□□□□□ -1.94
PrkdcP97313 Igkv1-88-201ENSMUST00000103336 362 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
PrkdcP97313 Gm23697-201ENSMUST00000103897 110 ntBASIC2.93□□□□□ -1.94
PrkdcP97313 Pdcl2-202ENSMUST00000122213 1049 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
PrkdcP97313 Gm17109-201ENSMUST00000163985 358 ntBASIC2.93□□□□□ -1.94
PrkdcP97313 4930445B16Rik-201ENSMUST00000170085 1123 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
PrkdcP97313 Trdv1-202ENSMUST00000187163 334 ntAPPRIS ALT2 BASIC2.93□□□□□ -1.94
PrkdcP97313 Gm42991-201ENSMUST00000196468 3837 ntBASIC2.93□□□□□ -1.94
PrkdcP97313 Gm44099-201ENSMUST00000203299 112 ntBASIC2.93□□□□□ -1.94
PrkdcP97313 Gm45245-201ENSMUST00000210082 376 ntBASIC2.93□□□□□ -1.94
PrkdcP97313 Gm8672-201ENSMUST00000221200 332 ntBASIC2.93□□□□□ -1.94
PrkdcP97313 Olfr811-201ENSMUST00000076437 960 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
PrkdcP97313 Pkd1l3-202ENSMUST00000109242 6606 ntAPPRIS ALT2 TSL 1 (best) BASIC2.93□□□□□ -1.94
PrkdcP97313 Cd33-203ENSMUST00000205503 5728 ntAPPRIS P3 TSL 1 (best) BASIC2.93□□□□□ -1.94
PrkdcP97313 Efhc2-201ENSMUST00000026014 2554 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
PrkdcP97313 Gm15337-201ENSMUST00000135378 3888 ntTSL 5 BASIC2.93□□□□□ -1.94
PrkdcP97313 Golgb1-203ENSMUST00000114812 11012 ntAPPRIS ALT2 TSL 5 BASIC2.93□□□□□ -1.94
PrkdcP97313 Sin3a-204ENSMUST00000167715 4961 ntAPPRIS P3 TSL 5 BASIC2.93□□□□□ -1.94
PrkdcP97313 Gm43665-201ENSMUST00000198672 1659 ntBASIC2.93□□□□□ -1.94
PrkdcP97313 Tbx20-201ENSMUST00000052946 9091 ntAPPRIS P3 TSL 1 (best) BASIC2.93□□□□□ -1.94
PrkdcP97313 Il7-201ENSMUST00000168269 2307 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
PrkdcP97313 Gm42640-201ENSMUST00000199792 1195 ntBASIC2.93□□□□□ -1.94
PrkdcP97313 Gm44200-201ENSMUST00000204883 662 ntTSL 5 BASIC2.93□□□□□ -1.94
PrkdcP97313 Olfr723-202ENSMUST00000206058 1078 ntAPPRIS P1 TSL 3 BASIC2.93□□□□□ -1.94
PrkdcP97313 Gm44674-201ENSMUST00000206159 415 ntTSL 3 BASIC2.93□□□□□ -1.94
PrkdcP97313 Gm45722-201ENSMUST00000213075 466 ntBASIC2.93□□□□□ -1.94
PrkdcP97313 AC122317.1-201ENSMUST00000218404 708 ntTSL 5 BASIC2.93□□□□□ -1.94
PrkdcP97313 Slc2a2-201ENSMUST00000029240 5569 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
PrkdcP97313 Zfp280c-203ENSMUST00000088898 4024 ntAPPRIS P3 TSL 1 (best) BASIC2.93□□□□□ -1.94
PrkdcP97313 Pou2f1-208ENSMUST00000160260 13022 ntAPPRIS ALT2 TSL 1 (best) BASIC2.93□□□□□ -1.94
PrkdcP97313 Gm37566-201ENSMUST00000192363 4355 ntBASIC2.93□□□□□ -1.94
PrkdcP97313 Akap13-205ENSMUST00000207750 12597 ntAPPRIS ALT2 TSL 5 BASIC2.93□□□□□ -1.94
PrkdcP97313 Dazl-201ENSMUST00000010736 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
PrkdcP97313 Srek1-204ENSMUST00000210489 6330 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
PrkdcP97313 Hormad1-203ENSMUST00000107154 1444 ntAPPRIS P3 TSL 1 (best) BASIC2.93□□□□□ -1.94
PrkdcP97313 Gm18594-201ENSMUST00000175733 1403 ntBASIC2.93□□□□□ -1.94
PrkdcP97313 Olfr204-202ENSMUST00000216261 5371 ntAPPRIS P1 TSL 3 BASIC2.93□□□□□ -1.94
PrkdcP97313 Peak1-204ENSMUST00000188142 7524 ntAPPRIS ALT2 TSL 1 (best) BASIC2.93□□□□□ -1.94
PrkdcP97313 Homer1-202ENSMUST00000079086 4287 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
PrkdcP97313 Ndst4-205ENSMUST00000174648 4996 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
PrkdcP97313 Gm3055-202ENSMUST00000218939 4067 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
PrkdcP97313 Zfp781-202ENSMUST00000219144 4067 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
PrkdcP97313 Gm15185-201ENSMUST00000117397 746 ntBASIC2.93□□□□□ -1.94
PrkdcP97313 Xlr3d-ps-201ENSMUST00000121687 658 ntBASIC2.93□□□□□ -1.94
PrkdcP97313 Gm25105-201ENSMUST00000122477 130 ntBASIC2.93□□□□□ -1.94
PrkdcP97313 Gm45020-201ENSMUST00000205356 381 ntTSL 3 BASIC2.93□□□□□ -1.94
PrkdcP97313 AC154296.3-201ENSMUST00000214427 712 ntBASIC2.93□□□□□ -1.94
PrkdcP97313 AC132465.3-201ENSMUST00000219326 195 ntBASIC2.93□□□□□ -1.94
PrkdcP97313 Sprr2i-201ENSMUST00000047264 617 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
PrkdcP97313 n-R5s151-201ENSMUST00000083959 119 ntBASIC2.93□□□□□ -1.94
PrkdcP97313 Mapk10-204ENSMUST00000112848 6761 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
PrkdcP97313 AC159326.1-201ENSMUST00000219989 1302 ntBASIC2.93□□□□□ -1.94
PrkdcP97313 Prep-201ENSMUST00000099858 10933 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
PrkdcP97313 Olfr578-202ENSMUST00000215606 3665 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
PrkdcP97313 Gm33148-201ENSMUST00000210835 7227 ntTSL 5 BASIC2.93□□□□□ -1.94
PrkdcP97313 Gm8473-201ENSMUST00000176697 1885 ntBASIC2.93□□□□□ -1.94
PrkdcP97313 Lgi1-207ENSMUST00000198518 7780 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
PrkdcP97313 Olfr943-205ENSMUST00000215770 8308 ntAPPRIS ALT2 TSL 2 BASIC2.93□□□□□ -1.94
PrkdcP97313 Ctnnd1-222ENSMUST00000111696 6281 ntTSL 5 BASIC2.92□□□□□ -1.94
PrkdcP97313 Rbbp6-202ENSMUST00000071590 5728 ntAPPRIS ALT2 TSL 5 BASIC2.92□□□□□ -1.94
PrkdcP97313 Gm12276-201ENSMUST00000121709 301 ntBASIC2.92□□□□□ -1.94
PrkdcP97313 Gm2862-201ENSMUST00000161524 328 ntBASIC2.92□□□□□ -1.94
PrkdcP97313 Il3-201ENSMUST00000019058 629 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
PrkdcP97313 Gm20877-202ENSMUST00000191358 1222 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
PrkdcP97313 Gm43344-201ENSMUST00000198723 1229 ntBASIC2.92□□□□□ -1.94
PrkdcP97313 Gm7587-201ENSMUST00000207618 1021 ntBASIC2.92□□□□□ -1.94
PrkdcP97313 Defb19-201ENSMUST00000053180 394 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
PrkdcP97313 Olfr1442-201ENSMUST00000057924 1065 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
PrkdcP97313 Ppargc1a-203ENSMUST00000132734 6464 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
PrkdcP97313 Zfp638-206ENSMUST00000203324 3822 ntAPPRIS ALT2 TSL 5 BASIC2.92□□□□□ -1.94
PrkdcP97313 Urb2-201ENSMUST00000034457 5853 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
PrkdcP97313 Hydin-201ENSMUST00000043141 15783 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
PrkdcP97313 Gramd1b-204ENSMUST00000121357 7334 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
PrkdcP97313 Mdc1-201ENSMUST00000082337 7335 ntAPPRIS P1 TSL 5 BASIC2.92□□□□□ -1.94
PrkdcP97313 Gm38207-201ENSMUST00000193009 3505 ntBASIC2.92□□□□□ -1.94
PrkdcP97313 A930017M01Rik-205ENSMUST00000227721 4167 ntBASIC2.92□□□□□ -1.94
PrkdcP97313 Slc28a3-201ENSMUST00000022036 4567 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
PrkdcP97313 Itih5-201ENSMUST00000026886 7900 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
PrkdcP97313 Obox4-ps1-201ENSMUST00000184446 700 ntBASIC2.92□□□□□ -1.94
PrkdcP97313 1700014L14Rik-201ENSMUST00000211704 481 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
PrkdcP97313 Gm23518-201ENSMUST00000082835 153 ntBASIC2.92□□□□□ -1.94
Retrieved 100 of 76,532 protein–RNA pairs in 68.2 ms