Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 Gm14003-201ENSMUST00000130919 313 ntTSL 3 BASIC6.62□□□□□ -1.35
Cux1P53564 Mir1251-201ENSMUST00000175486 84 ntBASIC6.62□□□□□ -1.35
Cux1P53564 Gm27158-201ENSMUST00000183813 238 ntBASIC6.62□□□□□ -1.35
Cux1P53564 Gm8953-201ENSMUST00000198497 904 ntTSL 5 BASIC6.62□□□□□ -1.35
Cux1P53564 Olfr812-202ENSMUST00000203571 1232 ntAPPRIS P1 TSL 3 BASIC6.62□□□□□ -1.35
Cux1P53564 AC153897.1-201ENSMUST00000213510 470 ntTSL 3 BASIC6.62□□□□□ -1.35
Cux1P53564 Reg3g-201ENSMUST00000032089 771 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Cux1P53564 Olfr273-201ENSMUST00000051520 1059 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
Cux1P53564 Olfr1325-201ENSMUST00000054541 948 ntAPPRIS P2 BASIC6.62□□□□□ -1.35
Cux1P53564 Olfr873-202ENSMUST00000075717 991 ntAPPRIS ALT2 TSL 2 BASIC6.62□□□□□ -1.35
Cux1P53564 Olfr507-201ENSMUST00000080014 951 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
Cux1P53564 Gm22868-201ENSMUST00000083955 164 ntBASIC6.62□□□□□ -1.35
Cux1P53564 Gm906-201ENSMUST00000099521 3152 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Cux1P53564 2210418O10Rik-203ENSMUST00000136719 2314 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Cux1P53564 Gm37060-201ENSMUST00000194997 2397 ntBASIC6.62□□□□□ -1.35
Cux1P53564 Chil6-201ENSMUST00000029510 1668 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Cux1P53564 AC126673.1-201ENSMUST00000223208 3856 ntBASIC6.62□□□□□ -1.35
Cux1P53564 Olfr1307-201ENSMUST00000099604 15582 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
Cux1P53564 Olfr348-203ENSMUST00000214909 3634 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
Cux1P53564 Dnah14-209ENSMUST00000208001 13696 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
Cux1P53564 5033423K11Rik-201ENSMUST00000117311 787 ntBASIC6.61□□□□□ -1.35
Cux1P53564 Gm12173-201ENSMUST00000117622 273 ntBASIC6.61□□□□□ -1.35
Cux1P53564 Gm16180-201ENSMUST00000128662 312 ntTSL 3 BASIC6.61□□□□□ -1.35
Cux1P53564 Gm13092-201ENSMUST00000136346 260 ntBASIC6.61□□□□□ -1.35
Cux1P53564 Ighv1-77-201ENSMUST00000170551 294 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
Cux1P53564 Gm25748-201ENSMUST00000175487 70 ntBASIC6.61□□□□□ -1.35
Cux1P53564 Gm4248-201ENSMUST00000196905 316 ntBASIC6.61□□□□□ -1.35
Cux1P53564 Gm43405-201ENSMUST00000198642 337 ntBASIC6.61□□□□□ -1.35
Cux1P53564 Gm9057-201ENSMUST00000198791 296 ntBASIC6.61□□□□□ -1.35
Cux1P53564 Gm43635-201ENSMUST00000202533 352 ntTSL 3 BASIC6.61□□□□□ -1.35
Cux1P53564 Gm44099-201ENSMUST00000203299 112 ntBASIC6.61□□□□□ -1.35
Cux1P53564 Olfr723-202ENSMUST00000206058 1078 ntAPPRIS P1 TSL 3 BASIC6.61□□□□□ -1.35
Cux1P53564 4930598N05Rik-201ENSMUST00000207048 550 ntTSL 5 BASIC6.61□□□□□ -1.35
Cux1P53564 mt-Nd6-201ENSMUST00000082419 519 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
Cux1P53564 Gm10705-201ENSMUST00000098980 461 ntBASIC6.61□□□□□ -1.35
Cux1P53564 Gabrg2-201ENSMUST00000070725 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Cux1P53564 Gm18180-201ENSMUST00000187562 1484 ntBASIC6.61□□□□□ -1.35
Cux1P53564 Oog1-201ENSMUST00000095509 1801 ntAPPRIS P2 TSL 1 (best) BASIC6.61□□□□□ -1.35
Cux1P53564 Kmt2d-201ENSMUST00000023741 19823 ntAPPRIS P2 TSL 5 BASIC6.61□□□□□ -1.35
Cux1P53564 Olfr1122-202ENSMUST00000215371 5036 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
Cux1P53564 AI838599-201ENSMUST00000133960 2953 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Cux1P53564 Vmn2r-ps5-201ENSMUST00000175971 2730 ntBASIC6.61□□□□□ -1.35
Cux1P53564 Gm13712-201ENSMUST00000117484 2295 ntBASIC6.61□□□□□ -1.35
Cux1P53564 Gm14033-201ENSMUST00000128307 2265 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Cux1P53564 Vmn1r31-205ENSMUST00000228586 2115 ntAPPRIS P2 BASIC6.61□□□□□ -1.35
Cux1P53564 Gm14399-204ENSMUST00000109060 1911 ntAPPRIS P1 TSL 3 BASIC6.61□□□□□ -1.35
Cux1P53564 Pramel6-201ENSMUST00000026956 1540 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Cux1P53564 Fam205c-202ENSMUST00000107978 1451 ntAPPRIS ALT2 TSL 1 (best) BASIC6.61□□□□□ -1.35
Cux1P53564 Ift80-208ENSMUST00000169064 4064 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Cux1P53564 2210407C18Rik-202ENSMUST00000108821 998 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
Cux1P53564 Ppp1r2-ps9-201ENSMUST00000173100 549 ntBASIC6.6□□□□□ -1.35
Cux1P53564 Gm23215-201ENSMUST00000178153 121 ntBASIC6.6□□□□□ -1.35
Cux1P53564 Gm44134-201ENSMUST00000203064 661 ntTSL 2 BASIC6.6□□□□□ -1.35
Cux1P53564 Minpp1-ps-201ENSMUST00000203344 946 ntBASIC6.6□□□□□ -1.35
Cux1P53564 Clec2f-202ENSMUST00000204981 657 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Cux1P53564 Gm34272-201ENSMUST00000208886 253 ntBASIC6.6□□□□□ -1.35
Cux1P53564 AC124562.1-201ENSMUST00000224673 337 ntBASIC6.6□□□□□ -1.35
Cux1P53564 Olfr1000-201ENSMUST00000099921 945 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
Cux1P53564 9630010A21Rik-201ENSMUST00000192348 2703 ntBASIC6.6□□□□□ -1.35
Cux1P53564 Cnot1-201ENSMUST00000068452 8152 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Cux1P53564 Gm3985-201ENSMUST00000132101 2515 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Cux1P53564 Myo3a-201ENSMUST00000044749 5082 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
Cux1P53564 Vmn2r17-201ENSMUST00000171841 2550 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
Cux1P53564 Vmn1r79-202ENSMUST00000226953 5636 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
Cux1P53564 Prune2-201ENSMUST00000087689 12512 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
Cux1P53564 Vmn1r195-202ENSMUST00000228711 3056 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
Cux1P53564 Gm26036-201ENSMUST00000158149 144 ntBASIC6.6□□□□□ -1.35
Cux1P53564 Gm29193-201ENSMUST00000187129 830 ntTSL 3 BASIC6.6□□□□□ -1.35
Cux1P53564 Gm20877-202ENSMUST00000191358 1222 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Cux1P53564 Gm17887-201ENSMUST00000200194 547 ntBASIC6.6□□□□□ -1.35
Cux1P53564 4930425K10Rik-201ENSMUST00000201190 745 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Cux1P53564 Gm10037-202ENSMUST00000221266 549 ntAPPRIS P5 TSL 2 BASIC6.6□□□□□ -1.35
Cux1P53564 AC125539.1-202ENSMUST00000226449 670 ntBASIC6.6□□□□□ -1.35
Cux1P53564 Senp8-203ENSMUST00000177963 3792 ntAPPRIS P3 TSL 1 (best) BASIC6.6□□□□□ -1.35
Cux1P53564 AC115910.1-201ENSMUST00000221188 4275 ntBASIC6.6□□□□□ -1.35
Cux1P53564 Vmn1r171-204ENSMUST00000226733 2918 ntAPPRIS ALT2 BASIC6.59□□□□□ -1.35
Cux1P53564 Zfy2-202ENSMUST00000187148 2846 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Cux1P53564 Gm43200-201ENSMUST00000200385 2161 ntBASIC6.59□□□□□ -1.35
Cux1P53564 Gm37639-201ENSMUST00000191623 2785 ntBASIC6.59□□□□□ -1.35
Cux1P53564 Gm26563-202ENSMUST00000181152 1931 ntTSL 5 BASIC6.59□□□□□ -1.35
Cux1P53564 Gm9597-202ENSMUST00000227632 1387 ntBASIC6.59□□□□□ -1.35
Cux1P53564 Nlrp5-203ENSMUST00000108441 3375 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.35
Cux1P53564 Gm28039-201ENSMUST00000149128 254 ntTSL 3 BASIC6.59□□□□□ -1.35
Cux1P53564 Gm26723-201ENSMUST00000180771 787 ntTSL 5 BASIC6.59□□□□□ -1.35
Cux1P53564 Gm21232-201ENSMUST00000182187 1006 ntBASIC6.59□□□□□ -1.35
Cux1P53564 Gm45796-201ENSMUST00000212483 114 ntBASIC6.59□□□□□ -1.35
Cux1P53564 Gm29774-201ENSMUST00000219270 436 ntBASIC6.59□□□□□ -1.35
Cux1P53564 CT030184.2-201ENSMUST00000223064 263 ntBASIC6.59□□□□□ -1.35
Cux1P53564 AC168059.1-201ENSMUST00000225846 841 ntBASIC6.59□□□□□ -1.35
Cux1P53564 Olfr16-201ENSMUST00000038432 1050 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
Cux1P53564 Ghr-208ENSMUST00000161561 2749 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Cux1P53564 Bbox1-201ENSMUST00000046233 4030 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
Cux1P53564 Foxr2-202ENSMUST00000163801 3072 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.36
Cux1P53564 Zfp72-201ENSMUST00000091481 1629 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
Cux1P53564 Ptprc-203ENSMUST00000182283 4702 ntAPPRIS P3 TSL 1 (best) BASIC6.59□□□□□ -1.36
Cux1P53564 Abca16-202ENSMUST00000120490 5088 ntAPPRIS P5 TSL 5 BASIC6.58□□□□□ -1.36
Cux1P53564 Gm11782-201ENSMUST00000131675 2804 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Cux1P53564 Akap11-201ENSMUST00000022593 5688 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
Cux1P53564 Gm38259-201ENSMUST00000194602 3534 ntBASIC6.58□□□□□ -1.36
Cux1P53564 Dgkk-201ENSMUST00000067410 7155 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 68.7 ms