Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Prg4-206ENSMUST00000161611 3821 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
Rfx1P48377 Tgif1-202ENSMUST00000118283 1388 ntAPPRIS ALT1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Rfx1P48377 Gnal-202ENSMUST00000076605 5223 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Rfx1P48377 Spef2-201ENSMUST00000041840 4247 ntAPPRIS P2 TSL 1 (best) BASIC6.81□□□□□ -1.32
Rfx1P48377 5730408A14Rik-201ENSMUST00000194955 1824 ntBASIC6.8□□□□□ -1.32
Rfx1P48377 Ppp2r3a-201ENSMUST00000066773 4461 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Rfx1P48377 Impg1-201ENSMUST00000085289 3356 ntAPPRIS ALT2 TSL 5 BASIC6.8□□□□□ -1.32
Rfx1P48377 Gm21269-201ENSMUST00000206521 12456 ntTSL 3 BASIC6.8□□□□□ -1.32
Rfx1P48377 Hbp1-201ENSMUST00000167458 2733 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Rfx1P48377 Slc22a29-205ENSMUST00000222533 1473 ntTSL 5 BASIC6.8□□□□□ -1.32
Rfx1P48377 Gm2832-201ENSMUST00000172412 1760 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
Rfx1P48377 Olfr668-202ENSMUST00000215359 3613 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
Rfx1P48377 Kcnj2-201ENSMUST00000042970 5444 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Rfx1P48377 Gm26300-201ENSMUST00000102282 94 ntBASIC6.8□□□□□ -1.32
Rfx1P48377 Gm24069-201ENSMUST00000104512 127 ntBASIC6.8□□□□□ -1.32
Rfx1P48377 Clec1b-202ENSMUST00000112079 455 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Rfx1P48377 Gm12388-201ENSMUST00000119112 1887 ntBASIC6.8□□□□□ -1.32
Rfx1P48377 Gm12935-201ENSMUST00000119352 246 ntBASIC6.8□□□□□ -1.32
Rfx1P48377 Mir1953-201ENSMUST00000157866 89 ntBASIC6.8□□□□□ -1.32
Rfx1P48377 Gm5218-201ENSMUST00000172270 465 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
Rfx1P48377 Gm17060-201ENSMUST00000172394 824 ntBASIC6.8□□□□□ -1.32
Rfx1P48377 Gm25451-201ENSMUST00000177832 121 ntBASIC6.8□□□□□ -1.32
Rfx1P48377 Gm23619-201ENSMUST00000178411 94 ntBASIC6.8□□□□□ -1.32
Rfx1P48377 Gm25474-201ENSMUST00000179052 94 ntBASIC6.8□□□□□ -1.32
Rfx1P48377 Gm22047-201ENSMUST00000179176 94 ntBASIC6.8□□□□□ -1.32
Rfx1P48377 Gm4832-201ENSMUST00000182679 399 ntBASIC6.8□□□□□ -1.32
Rfx1P48377 Mir6992-201ENSMUST00000183342 109 ntBASIC6.8□□□□□ -1.32
Rfx1P48377 Gm27242-201ENSMUST00000184211 1151 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Rfx1P48377 Gm33206-201ENSMUST00000193544 454 ntTSL 2 BASIC6.8□□□□□ -1.32
Rfx1P48377 Gm17954-201ENSMUST00000195893 607 ntBASIC6.8□□□□□ -1.32
Rfx1P48377 Gm43612-201ENSMUST00000196087 3207 ntBASIC6.8□□□□□ -1.32
Rfx1P48377 Gm43856-201ENSMUST00000197004 369 ntBASIC6.8□□□□□ -1.32
Rfx1P48377 Gm38562-201ENSMUST00000199398 1126 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Rfx1P48377 Gm2287-202ENSMUST00000199619 1000 ntBASIC6.8□□□□□ -1.32
Rfx1P48377 Gm44134-202ENSMUST00000204777 545 ntBASIC6.8□□□□□ -1.32
Rfx1P48377 Gm45431-201ENSMUST00000210143 588 ntTSL 5 BASIC6.8□□□□□ -1.32
Rfx1P48377 Gm7786-201ENSMUST00000210494 436 ntBASIC6.8□□□□□ -1.32
Rfx1P48377 Ifitm6-203ENSMUST00000211330 813 ntAPPRIS ALT2 TSL 2 BASIC6.8□□□□□ -1.32
Rfx1P48377 Gm18789-201ENSMUST00000216115 550 ntBASIC6.8□□□□□ -1.32
Rfx1P48377 AC163354.1-203ENSMUST00000222356 643 ntTSL 5 BASIC6.8□□□□□ -1.32
Rfx1P48377 AC133498.1-201ENSMUST00000222871 2925 ntTSL 5 BASIC6.8□□□□□ -1.32
Rfx1P48377 AC192333.6-201ENSMUST00000224565 725 ntBASIC6.8□□□□□ -1.32
Rfx1P48377 AC129085.3-201ENSMUST00000225686 1705 ntBASIC6.8□□□□□ -1.32
Rfx1P48377 CT030238.4-203ENSMUST00000227343 836 ntBASIC6.8□□□□□ -1.32
Rfx1P48377 Cypt1-201ENSMUST00000024026 672 ntAPPRIS P3 TSL 1 (best) BASIC6.8□□□□□ -1.32
Rfx1P48377 Olfr918-201ENSMUST00000055099 978 ntAPPRIS P2 BASIC6.8□□□□□ -1.32
Rfx1P48377 Vmn1r215-201ENSMUST00000072972 1048 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
Rfx1P48377 Ak6-202ENSMUST00000084721 1222 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Rfx1P48377 4930533I22Rik-201ENSMUST00000176290 2564 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Rfx1P48377 Tor1aip2-203ENSMUST00000097526 2589 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Rfx1P48377 Naip6-202ENSMUST00000118574 6827 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Rfx1P48377 Eps8-202ENSMUST00000100841 4151 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Rfx1P48377 Olfr922-202ENSMUST00000213164 4028 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
Rfx1P48377 Slc28a2-201ENSMUST00000028652 3852 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Rfx1P48377 Gm19113-201ENSMUST00000217552 1828 ntBASIC6.8□□□□□ -1.32
Rfx1P48377 Sult1c2-201ENSMUST00000023886 1846 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Rfx1P48377 Gm7269-201ENSMUST00000210819 1373 ntBASIC6.8□□□□□ -1.32
Rfx1P48377 Rgs7-207ENSMUST00000195324 2209 ntAPPRIS ALT2 TSL 5 BASIC6.8□□□□□ -1.32
Rfx1P48377 Gm43359-201ENSMUST00000197944 2200 ntBASIC6.8□□□□□ -1.32
Rfx1P48377 AC123705.3-201ENSMUST00000223531 2069 ntBASIC6.8□□□□□ -1.32
Rfx1P48377 Gm42704-201ENSMUST00000196875 1778 ntBASIC6.8□□□□□ -1.32
Rfx1P48377 Parp4-201ENSMUST00000161553 6387 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
Rfx1P48377 Usp29-204ENSMUST00000200535 7540 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
Rfx1P48377 Gbp7-201ENSMUST00000045097 5614 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Rfx1P48377 Ankar-203ENSMUST00000212573 3952 ntAPPRIS ALT2 TSL 1 (best) BASIC6.79□□□□□ -1.32
Rfx1P48377 Stag2-202ENSMUST00000115072 5955 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
Rfx1P48377 Ighv1-18-201ENSMUST00000103504 306 ntAPPRIS ALT2 BASIC6.79□□□□□ -1.32
Rfx1P48377 Gm22284-201ENSMUST00000104132 132 ntBASIC6.79□□□□□ -1.32
Rfx1P48377 Gm5381-201ENSMUST00000117975 1250 ntBASIC6.79□□□□□ -1.32
Rfx1P48377 Gm14783-201ENSMUST00000118900 663 ntBASIC6.79□□□□□ -1.32
Rfx1P48377 Gm14679-201ENSMUST00000121536 722 ntBASIC6.79□□□□□ -1.32
Rfx1P48377 Gm16259-201ENSMUST00000145241 553 ntBASIC6.79□□□□□ -1.32
Rfx1P48377 Gm23228-201ENSMUST00000157296 270 ntBASIC6.79□□□□□ -1.32
Rfx1P48377 Gm22916-201ENSMUST00000157616 119 ntBASIC6.79□□□□□ -1.32
Rfx1P48377 Gm23179-201ENSMUST00000158693 304 ntBASIC6.79□□□□□ -1.32
Rfx1P48377 Gm24155-201ENSMUST00000175259 110 ntBASIC6.79□□□□□ -1.32
Rfx1P48377 Vmn2r-ps3-201ENSMUST00000176077 1101 ntBASIC6.79□□□□□ -1.32
Rfx1P48377 Vmn2r-ps10-201ENSMUST00000176836 898 ntBASIC6.79□□□□□ -1.32
Rfx1P48377 Vmn2r-ps8-201ENSMUST00000177088 898 ntBASIC6.79□□□□□ -1.32
Rfx1P48377 Ear1-202ENSMUST00000179200 519 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Rfx1P48377 Gm17048-201ENSMUST00000179266 847 ntBASIC6.79□□□□□ -1.32
Rfx1P48377 Gm8183-201ENSMUST00000183134 980 ntBASIC6.79□□□□□ -1.32
Rfx1P48377 Gm38221-201ENSMUST00000195146 365 ntBASIC6.79□□□□□ -1.32
Rfx1P48377 Eif4e-202ENSMUST00000196990 856 ntTSL 3 BASIC6.79□□□□□ -1.32
Rfx1P48377 Gm43114-201ENSMUST00000198298 343 ntBASIC6.79□□□□□ -1.32
Rfx1P48377 Gm44316-201ENSMUST00000199274 97 ntBASIC6.79□□□□□ -1.32
Rfx1P48377 Gm44726-201ENSMUST00000203427 217 ntBASIC6.79□□□□□ -1.32
Rfx1P48377 1700093K21Rik-201ENSMUST00000020527 1030 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Rfx1P48377 Olfr200-ps1-201ENSMUST00000207964 874 ntBASIC6.79□□□□□ -1.32
Rfx1P48377 Gm45724-201ENSMUST00000213031 420 ntBASIC6.79□□□□□ -1.32
Rfx1P48377 Gm3266-201ENSMUST00000217832 591 ntBASIC6.79□□□□□ -1.32
Rfx1P48377 AC160863.2-201ENSMUST00000218392 858 ntTSL 5 BASIC6.79□□□□□ -1.32
Rfx1P48377 Gm7550-201ENSMUST00000223334 282 ntTSL 5 BASIC6.79□□□□□ -1.32
Rfx1P48377 AC135086.1-201ENSMUST00000228621 817 ntBASIC6.79□□□□□ -1.32
Rfx1P48377 Olfr16-201ENSMUST00000038432 1050 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
Rfx1P48377 Prr11-201ENSMUST00000051395 3824 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Rfx1P48377 Olfr891-201ENSMUST00000062535 951 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
Rfx1P48377 Olfr967-201ENSMUST00000069561 933 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
Rfx1P48377 Fxyd3-201ENSMUST00000072331 439 ntTSL 2 BASIC6.79□□□□□ -1.32
Rfx1P48377 Olfr875-201ENSMUST00000080634 1004 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
Retrieved 100 of 76,532 protein–RNA pairs in 73.4 ms