Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 Gm15095-201ENSMUST00000118996 1430 ntBASIC4.86□□□□□ -1.63
Lire1P11260 Btbd35f4-201ENSMUST00000105011 1491 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
Lire1P11260 Cd44-202ENSMUST00000060516 3495 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
Lire1P11260 Gm13757-201ENSMUST00000126038 4460 ntAPPRIS P1 TSL 3 BASIC4.86□□□□□ -1.63
Lire1P11260 Gm5117-201ENSMUST00000178878 2553 ntBASIC4.86□□□□□ -1.63
Lire1P11260 Olfr1191-ps1-201ENSMUST00000120598 4677 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
Lire1P11260 Gm42551-201ENSMUST00000197701 1573 ntBASIC4.86□□□□□ -1.63
Lire1P11260 Olfr969-202ENSMUST00000213266 1597 ntAPPRIS P1 TSL 2 BASIC4.86□□□□□ -1.63
Lire1P11260 Olfr13-202ENSMUST00000216179 3677 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
Lire1P11260 Dmxl2-202ENSMUST00000118600 9465 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
Lire1P11260 Olfr893-202ENSMUST00000211975 2924 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
Lire1P11260 Vmn1r14-203ENSMUST00000227574 7394 ntAPPRIS ALT2 BASIC4.85□□□□□ -1.63
Lire1P11260 Vmn2r-ps43-201ENSMUST00000173798 2473 ntBASIC4.85□□□□□ -1.63
Lire1P11260 Vmn2r95-201ENSMUST00000166327 2538 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
Lire1P11260 Zfp131-201ENSMUST00000177916 3067 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
Lire1P11260 Gm44829-201ENSMUST00000208008 3193 ntBASIC4.85□□□□□ -1.63
Lire1P11260 Gm8744-201ENSMUST00000204475 3581 ntBASIC4.85□□□□□ -1.63
Lire1P11260 Gm13785-201ENSMUST00000119099 690 ntBASIC4.85□□□□□ -1.63
Lire1P11260 Gm12294-201ENSMUST00000119723 490 ntBASIC4.85□□□□□ -1.63
Lire1P11260 Gm12734-201ENSMUST00000120228 948 ntBASIC4.85□□□□□ -1.63
Lire1P11260 Gm11846-201ENSMUST00000155156 515 ntTSL 2 BASIC4.85□□□□□ -1.63
Lire1P11260 Gm26171-201ENSMUST00000158422 131 ntBASIC4.85□□□□□ -1.63
Lire1P11260 Gm17103-201ENSMUST00000168897 549 ntTSL 3 BASIC4.85□□□□□ -1.63
Lire1P11260 Olfr753-ps1-202ENSMUST00000174673 919 ntBASIC4.85□□□□□ -1.63
Lire1P11260 Gm13698-201ENSMUST00000178325 732 ntTSL 5 BASIC4.85□□□□□ -1.63
Lire1P11260 Gm7094-201ENSMUST00000178379 366 ntBASIC4.85□□□□□ -1.63
Lire1P11260 Gm13694-202ENSMUST00000178655 732 ntTSL 5 BASIC4.85□□□□□ -1.63
Lire1P11260 Gm13696-201ENSMUST00000179311 732 ntTSL 5 BASIC4.85□□□□□ -1.63
Lire1P11260 Gm13693-202ENSMUST00000179448 732 ntTSL 5 BASIC4.85□□□□□ -1.63
Lire1P11260 Gm13695-202ENSMUST00000179504 732 ntTSL 5 BASIC4.85□□□□□ -1.63
Lire1P11260 Gm13697-202ENSMUST00000179552 732 ntTSL 5 BASIC4.85□□□□□ -1.63
Lire1P11260 Mir6393-201ENSMUST00000183709 94 ntBASIC4.85□□□□□ -1.63
Lire1P11260 Gm27541-201ENSMUST00000184078 122 ntBASIC4.85□□□□□ -1.63
Lire1P11260 Gm2914-201ENSMUST00000186120 328 ntBASIC4.85□□□□□ -1.63
Lire1P11260 1810064F22Rik-202ENSMUST00000187399 630 ntTSL 3 BASIC4.85□□□□□ -1.63
Lire1P11260 Gm29130-201ENSMUST00000191015 618 ntTSL 5 BASIC4.85□□□□□ -1.63
Lire1P11260 Gm37253-201ENSMUST00000195679 562 ntTSL 5 BASIC4.85□□□□□ -1.63
Lire1P11260 Pgk1-ps3-201ENSMUST00000198338 1201 ntBASIC4.85□□□□□ -1.63
Lire1P11260 4930519L02Rik-202ENSMUST00000200254 452 ntTSL 3 BASIC4.85□□□□□ -1.63
Lire1P11260 Gm44278-201ENSMUST00000204082 312 ntTSL 2 BASIC4.85□□□□□ -1.63
Lire1P11260 C430039J01Rik-201ENSMUST00000205973 957 ntBASIC4.85□□□□□ -1.63
Lire1P11260 Lrrc72-201ENSMUST00000020853 660 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
Lire1P11260 Gm45247-201ENSMUST00000210757 309 ntBASIC4.85□□□□□ -1.63
Lire1P11260 Gm18850-201ENSMUST00000211578 388 ntBASIC4.85□□□□□ -1.63
Lire1P11260 Olfr589-202ENSMUST00000218483 966 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
Lire1P11260 AC156798.1-201ENSMUST00000220508 224 ntBASIC4.85□□□□□ -1.63
Lire1P11260 CT025611.1-201ENSMUST00000222537 906 ntTSL 5 BASIC4.85□□□□□ -1.63
Lire1P11260 4930447F04Rik-201ENSMUST00000033525 703 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Lire1P11260 Olfr1022-201ENSMUST00000054736 948 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
Lire1P11260 Olfr381-201ENSMUST00000078358 936 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
Lire1P11260 Klk1b9-201ENSMUST00000081399 870 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Lire1P11260 Zfp37-202ENSMUST00000129511 1691 ntTSL 5 BASIC4.85□□□□□ -1.63
Lire1P11260 Gab3-203ENSMUST00000114109 2093 ntTSL 2 BASIC4.85□□□□□ -1.63
Lire1P11260 Prune2-201ENSMUST00000087689 12512 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
Lire1P11260 Zfp990-201ENSMUST00000105741 3044 ntAPPRIS P1 TSL 3 BASIC4.85□□□□□ -1.63
Lire1P11260 Fam46d-204ENSMUST00000167154 3004 ntAPPRIS P1 TSL 3 BASIC4.85□□□□□ -1.63
Lire1P11260 Ctps2-204ENSMUST00000112301 3099 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Lire1P11260 Gm43047-201ENSMUST00000200089 3460 ntBASIC4.85□□□□□ -1.63
Lire1P11260 Gm43696-201ENSMUST00000199385 6071 ntBASIC4.85□□□□□ -1.63
Lire1P11260 Vps41-201ENSMUST00000072961 3199 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Lire1P11260 Vmn1r209-202ENSMUST00000227038 6461 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
Lire1P11260 Gm11743-201ENSMUST00000117385 1735 ntBASIC4.84□□□□□ -1.63
Lire1P11260 Mmp12-203ENSMUST00000120655 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
Lire1P11260 Olfr114-203ENSMUST00000216249 1457 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
Lire1P11260 Gm42535-201ENSMUST00000197312 1399 ntBASIC4.84□□□□□ -1.63
Lire1P11260 Olfr1368-202ENSMUST00000216039 1389 ntAPPRIS P1 TSL 3 BASIC4.84□□□□□ -1.63
Lire1P11260 Zfp78-204ENSMUST00000207347 3883 ntAPPRIS P4 TSL 1 (best) BASIC4.84□□□□□ -1.63
Lire1P11260 Rnf148-201ENSMUST00000104979 1239 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
Lire1P11260 Gm13250-201ENSMUST00000117209 753 ntBASIC4.84□□□□□ -1.63
Lire1P11260 Gm14985-201ENSMUST00000118693 786 ntBASIC4.84□□□□□ -1.63
Lire1P11260 Gm15367-201ENSMUST00000122398 1016 ntBASIC4.84□□□□□ -1.63
Lire1P11260 4930558G05Rik-201ENSMUST00000122848 494 ntTSL 5 BASIC4.84□□□□□ -1.63
Lire1P11260 Gm16725-201ENSMUST00000138744 1253 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
Lire1P11260 Gm16365-204ENSMUST00000143877 779 ntTSL 2 BASIC4.84□□□□□ -1.63
Lire1P11260 4930440I19Rik-202ENSMUST00000145972 676 ntTSL 2 BASIC4.84□□□□□ -1.63
Lire1P11260 Gm16084-201ENSMUST00000148122 620 ntTSL 3 BASIC4.84□□□□□ -1.63
Lire1P11260 Olfr1038-ps-201ENSMUST00000149775 1209 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
Lire1P11260 G630016G05Rik-201ENSMUST00000152412 796 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
Lire1P11260 Gm16064-201ENSMUST00000154997 464 ntTSL 2 BASIC4.84□□□□□ -1.63
Lire1P11260 Gm25430-201ENSMUST00000157614 289 ntBASIC4.84□□□□□ -1.63
Lire1P11260 Gm15790-201ENSMUST00000161109 1251 ntBASIC4.84□□□□□ -1.63
Lire1P11260 Gm17657-201ENSMUST00000168877 510 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
Lire1P11260 Gm4134-201ENSMUST00000173244 563 ntBASIC4.84□□□□□ -1.63
Lire1P11260 Obox4-ps14-201ENSMUST00000177198 1127 ntBASIC4.84□□□□□ -1.63
Lire1P11260 Gm10784-201ENSMUST00000178715 238 ntBASIC4.84□□□□□ -1.63
Lire1P11260 Gm2950-201ENSMUST00000185530 520 ntBASIC4.84□□□□□ -1.63
Lire1P11260 Gm29525-201ENSMUST00000189844 699 ntBASIC4.84□□□□□ -1.63
Lire1P11260 Gm29523-201ENSMUST00000191415 699 ntBASIC4.84□□□□□ -1.63
Lire1P11260 Gm2053-201ENSMUST00000195671 631 ntBASIC4.84□□□□□ -1.63
Lire1P11260 4930558C23Rik-201ENSMUST00000196239 731 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Lire1P11260 Gm33758-201ENSMUST00000199230 407 ntTSL 3 BASIC4.84□□□□□ -1.63
Lire1P11260 AC161250.1-201ENSMUST00000213426 1111 ntBASIC4.84□□□□□ -1.63
Lire1P11260 Gm39302-201ENSMUST00000215184 636 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
Lire1P11260 AC153532.1-201ENSMUST00000218126 1111 ntBASIC4.84□□□□□ -1.63
Lire1P11260 Gm40392-201ENSMUST00000220656 562 ntTSL 5 BASIC4.84□□□□□ -1.63
Lire1P11260 Gm20368-201ENSMUST00000220716 301 ntBASIC4.84□□□□□ -1.63
Lire1P11260 Rpl29-ps2-203ENSMUST00000222043 1036 ntTSL 5 BASIC4.84□□□□□ -1.63
Lire1P11260 CT030182.2-201ENSMUST00000223569 620 ntBASIC4.84□□□□□ -1.63
Lire1P11260 AC129085.4-201ENSMUST00000224536 570 ntBASIC4.84□□□□□ -1.63
Lire1P11260 AC140210.1-201ENSMUST00000224961 534 ntBASIC4.84□□□□□ -1.63
Retrieved 100 of 76,532 protein–RNA pairs in 69.1 ms