Protein–RNA interactions for Protein: P06804

Tnf, Tumor necrosis factor, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TnfP06804 Nlrp4f-204ENSMUST00000221659 3551 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
TnfP06804 Zfp935-201ENSMUST00000076195 1631 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
TnfP06804 AC122357.2-201ENSMUST00000220732 1525 ntBASIC4.71□□□□□ -1.66
TnfP06804 AC158605.2-201ENSMUST00000220287 2726 ntAPPRIS P1 TSL 2 BASIC4.71□□□□□ -1.66
TnfP06804 D030025E07Rik-203ENSMUST00000197413 2346 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
TnfP06804 Vmn1r21-201ENSMUST00000203310 1779 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
TnfP06804 Elavl4-205ENSMUST00000106600 3799 ntTSL 5 BASIC4.7□□□□□ -1.66
TnfP06804 Rnf213-202ENSMUST00000131035 16716 ntAPPRIS P5 TSL 5 BASIC4.7□□□□□ -1.66
TnfP06804 Rnf213-201ENSMUST00000093902 16716 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
TnfP06804 Zfp788-202ENSMUST00000098508 3775 ntAPPRIS P5 TSL 1 (best) BASIC4.7□□□□□ -1.66
TnfP06804 Snord66-201ENSMUST00000104051 75 ntBASIC4.7□□□□□ -1.66
TnfP06804 Gm6062-201ENSMUST00000120462 631 ntBASIC4.7□□□□□ -1.66
TnfP06804 Olfr397-201ENSMUST00000121280 1091 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
TnfP06804 Gm15075-201ENSMUST00000122187 477 ntBASIC4.7□□□□□ -1.66
TnfP06804 Gm22958-201ENSMUST00000122512 184 ntBASIC4.7□□□□□ -1.66
TnfP06804 Gm24382-201ENSMUST00000122698 107 ntBASIC4.7□□□□□ -1.66
TnfP06804 Gm22277-201ENSMUST00000157204 277 ntBASIC4.7□□□□□ -1.66
TnfP06804 Gm21971-201ENSMUST00000180187 337 ntTSL 5 BASIC4.7□□□□□ -1.66
TnfP06804 Mir6414-201ENSMUST00000183685 82 ntBASIC4.7□□□□□ -1.66
TnfP06804 Mir7222-201ENSMUST00000183740 75 ntBASIC4.7□□□□□ -1.66
TnfP06804 Gm37601-201ENSMUST00000194922 394 ntBASIC4.7□□□□□ -1.66
TnfP06804 Gm43037-201ENSMUST00000196808 250 ntBASIC4.7□□□□□ -1.66
TnfP06804 4930598N05Rik-204ENSMUST00000207733 675 ntTSL 3 BASIC4.7□□□□□ -1.66
TnfP06804 Gm45086-201ENSMUST00000209052 462 ntTSL 5 BASIC4.7□□□□□ -1.66
TnfP06804 Gm10988-201ENSMUST00000209150 1088 ntBASIC4.7□□□□□ -1.66
TnfP06804 5430402P08Rik-201ENSMUST00000211799 1143 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
TnfP06804 Calml4-203ENSMUST00000213643 710 ntTSL 2 BASIC4.7□□□□□ -1.66
TnfP06804 AC110816.1-201ENSMUST00000218559 980 ntBASIC4.7□□□□□ -1.66
TnfP06804 AC140930.4-201ENSMUST00000220750 150 ntBASIC4.7□□□□□ -1.66
TnfP06804 AC119241.1-201ENSMUST00000223651 534 ntBASIC4.7□□□□□ -1.66
TnfP06804 AC080021.1-201ENSMUST00000228104 700 ntBASIC4.7□□□□□ -1.66
TnfP06804 Olfr830-201ENSMUST00000078861 948 ntAPPRIS P2 BASIC4.7□□□□□ -1.66
TnfP06804 Olfr143-201ENSMUST00000093865 942 ntAPPRIS P2 BASIC4.7□□□□□ -1.66
TnfP06804 Vmn2r26-201ENSMUST00000032238 2568 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
TnfP06804 Olfr1507-203ENSMUST00000206062 2803 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
TnfP06804 Cyp2j12-201ENSMUST00000097972 1675 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
TnfP06804 Cd44-202ENSMUST00000060516 3495 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
TnfP06804 Vmn1r213-203ENSMUST00000228031 3367 ntAPPRIS ALT2 BASIC4.7□□□□□ -1.66
TnfP06804 Olfr1341-203ENSMUST00000215117 4700 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
TnfP06804 Vmn2r-ps56-201ENSMUST00000174814 2596 ntBASIC4.69□□□□□ -1.66
TnfP06804 Olfr1428-202ENSMUST00000208391 1368 ntTSL 3 BASIC4.69□□□□□ -1.66
TnfP06804 Olfr1138-202ENSMUST00000214573 1611 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
TnfP06804 Ckap5-204ENSMUST00000111338 6665 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
TnfP06804 Igkv1-88-201ENSMUST00000103336 362 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
TnfP06804 Gm22493-201ENSMUST00000104494 132 ntBASIC4.69□□□□□ -1.66
TnfP06804 Lrrc51-207ENSMUST00000106967 675 ntTSL 3 BASIC4.69□□□□□ -1.66
TnfP06804 Ceacam13-202ENSMUST00000108488 1005 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
TnfP06804 Gm23178-201ENSMUST00000116782 95 ntBASIC4.69□□□□□ -1.66
TnfP06804 Rpl38-ps2-201ENSMUST00000117356 213 ntBASIC4.69□□□□□ -1.66
TnfP06804 Gm8129-201ENSMUST00000118230 213 ntBASIC4.69□□□□□ -1.66
TnfP06804 Gm15923-201ENSMUST00000119300 1169 ntBASIC4.69□□□□□ -1.66
TnfP06804 Gm15230-201ENSMUST00000153701 510 ntTSL 2 BASIC4.69□□□□□ -1.66
TnfP06804 Gm22211-201ENSMUST00000158097 156 ntBASIC4.69□□□□□ -1.66
TnfP06804 Gm22637-201ENSMUST00000158144 283 ntBASIC4.69□□□□□ -1.66
TnfP06804 Gm1992-201ENSMUST00000161581 250 ntTSL 3 BASIC4.69□□□□□ -1.66
TnfP06804 Vmn1r166-201ENSMUST00000164045 921 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
TnfP06804 Gm8453-201ENSMUST00000167253 921 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
TnfP06804 Gm4498-201ENSMUST00000168580 921 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
TnfP06804 Vmn1r118-201ENSMUST00000172322 921 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
TnfP06804 Gm8693-201ENSMUST00000178871 921 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
TnfP06804 Gm22254-201ENSMUST00000179186 110 ntBASIC4.69□□□□□ -1.66
TnfP06804 Vmn1r138-201ENSMUST00000179206 921 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
TnfP06804 Vmn1r131-201ENSMUST00000179390 921 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
TnfP06804 Vmn1r111-201ENSMUST00000179511 921 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
TnfP06804 Mir3473f-201ENSMUST00000183743 136 ntBASIC4.69□□□□□ -1.66
TnfP06804 Gm27242-201ENSMUST00000184211 1151 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
TnfP06804 Ighv10-4-201ENSMUST00000193702 299 ntBASIC4.69□□□□□ -1.66
TnfP06804 Gm38108-201ENSMUST00000193891 399 ntTSL 5 BASIC4.69□□□□□ -1.66
TnfP06804 Gm17951-201ENSMUST00000198536 496 ntBASIC4.69□□□□□ -1.66
TnfP06804 Gm43001-202ENSMUST00000199076 192 ntTSL 3 BASIC4.69□□□□□ -1.66
TnfP06804 Gm10037-202ENSMUST00000221266 549 ntAPPRIS P5 TSL 2 BASIC4.69□□□□□ -1.66
TnfP06804 Gm40477-202ENSMUST00000221505 881 ntTSL 3 BASIC4.69□□□□□ -1.66
TnfP06804 BC028528-201ENSMUST00000036360 752 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
TnfP06804 Olfr273-201ENSMUST00000051520 1059 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
TnfP06804 Olfr453-201ENSMUST00000053647 954 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
TnfP06804 Spink12-201ENSMUST00000081271 1007 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
TnfP06804 Xist-201ENSMUST00000127786 17769 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
TnfP06804 Mlip-205ENSMUST00000183955 3069 ntAPPRIS P5 TSL 5 BASIC4.69□□□□□ -1.66
TnfP06804 Brip1-201ENSMUST00000044423 6931 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
TnfP06804 Vmn1r20-202ENSMUST00000227909 3709 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
TnfP06804 Gm44724-201ENSMUST00000207119 5548 ntTSL 5 BASIC4.69□□□□□ -1.66
TnfP06804 Zfhx4-205ENSMUST00000176383 13500 ntAPPRIS P2 TSL 5 BASIC4.69□□□□□ -1.66
TnfP06804 Gm44587-201ENSMUST00000207399 1685 ntBASIC4.69□□□□□ -1.66
TnfP06804 Gm45555-201ENSMUST00000210028 2602 ntBASIC4.69□□□□□ -1.66
TnfP06804 Vmn1r14-203ENSMUST00000227574 7394 ntAPPRIS ALT2 BASIC4.69□□□□□ -1.66
TnfP06804 Usp9x-201ENSMUST00000089302 11887 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
TnfP06804 Gm43781-201ENSMUST00000197634 2681 ntBASIC4.69□□□□□ -1.66
TnfP06804 Zscan4-ps1-201ENSMUST00000165848 2015 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
TnfP06804 Xkr9-201ENSMUST00000088542 1926 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
TnfP06804 Olfr1307-201ENSMUST00000099604 15582 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
TnfP06804 B230206I08Rik-201ENSMUST00000207479 3191 ntBASIC4.68□□□□□ -1.66
TnfP06804 4930509J09Rik-201ENSMUST00000194514 1526 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
TnfP06804 Vmn1r1-203ENSMUST00000227629 3654 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
TnfP06804 Igkv1-135-201ENSMUST00000103303 394 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
TnfP06804 Igkv1-132-201ENSMUST00000103305 362 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
TnfP06804 Igkv11-106-201ENSMUST00000103331 346 ntBASIC4.68□□□□□ -1.66
TnfP06804 Gm23746-201ENSMUST00000104229 125 ntBASIC4.68□□□□□ -1.66
TnfP06804 Gm10964-201ENSMUST00000106852 120 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
TnfP06804 Clec1b-203ENSMUST00000112081 614 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
TnfP06804 Gm7834-201ENSMUST00000117560 437 ntBASIC4.68□□□□□ -1.66
Retrieved 100 of 76,532 protein–RNA pairs in 66.8 ms