Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Rrm2b-203ENSMUST00000137636 900 ntTSL 5 BASIC3.55□□□□□ -1.84
Hmgb3O54879 Gm24343-201ENSMUST00000158708 111 ntBASIC3.55□□□□□ -1.84
Hmgb3O54879 Gm7152-201ENSMUST00000163570 605 ntBASIC3.55□□□□□ -1.84
Hmgb3O54879 Phf11b-201ENSMUST00000166121 1184 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
Hmgb3O54879 Vmn1r-ps64-201ENSMUST00000173746 655 ntBASIC3.55□□□□□ -1.84
Hmgb3O54879 Mir7211-201ENSMUST00000184071 63 ntBASIC3.55□□□□□ -1.84
Hmgb3O54879 Mir6989-201ENSMUST00000184812 65 ntBASIC3.55□□□□□ -1.84
Hmgb3O54879 Ly6e-215ENSMUST00000191436 1122 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
Hmgb3O54879 D030025E07Rik-204ENSMUST00000198275 653 ntTSL 3 BASIC3.55□□□□□ -1.84
Hmgb3O54879 Olfr202-202ENSMUST00000201687 1232 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
Hmgb3O54879 Gm45702-201ENSMUST00000211856 644 ntTSL 2 BASIC3.55□□□□□ -1.84
Hmgb3O54879 AC166902.1-201ENSMUST00000216653 517 ntBASIC3.55□□□□□ -1.84
Hmgb3O54879 Vmn2r-ps92-201ENSMUST00000220242 388 ntBASIC3.55□□□□□ -1.84
Hmgb3O54879 AC165164.2-201ENSMUST00000220313 392 ntTSL 3 BASIC3.55□□□□□ -1.84
Hmgb3O54879 Gm3338-201ENSMUST00000220982 269 ntBASIC3.55□□□□□ -1.84
Hmgb3O54879 AC125539.2-201ENSMUST00000228339 753 ntBASIC3.55□□□□□ -1.84
Hmgb3O54879 Olfr509-201ENSMUST00000061690 1075 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
Hmgb3O54879 4930578G10Rik-201ENSMUST00000068158 614 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
Hmgb3O54879 Olfr969-201ENSMUST00000074566 936 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
Hmgb3O54879 Mir28a-201ENSMUST00000083560 86 ntBASIC3.55□□□□□ -1.84
Hmgb3O54879 n-R5s182-201ENSMUST00000083889 107 ntBASIC3.55□□□□□ -1.84
Hmgb3O54879 Sorbs2-203ENSMUST00000124544 3798 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
Hmgb3O54879 Olfr365-203ENSMUST00000218602 5374 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
Hmgb3O54879 Olfr172-202ENSMUST00000214139 1778 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
Hmgb3O54879 Cfh-203ENSMUST00000111977 4100 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
Hmgb3O54879 Ifi203-203ENSMUST00000123708 3482 ntAPPRIS P3 TSL 1 (best) BASIC3.55□□□□□ -1.84
Hmgb3O54879 Gm37211-201ENSMUST00000193392 3433 ntBASIC3.55□□□□□ -1.84
Hmgb3O54879 2310001H17Rik-203ENSMUST00000181517 3981 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
Hmgb3O54879 Gm37639-201ENSMUST00000191623 2785 ntBASIC3.55□□□□□ -1.84
Hmgb3O54879 Olfr1020-202ENSMUST00000215347 2640 ntAPPRIS P1 TSL 3 BASIC3.55□□□□□ -1.84
Hmgb3O54879 Olfr1180-202ENSMUST00000216121 2079 ntAPPRIS P1 TSL 3 BASIC3.55□□□□□ -1.84
Hmgb3O54879 Olfr128-202ENSMUST00000216440 3644 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
Hmgb3O54879 Obscn-203ENSMUST00000052872 23006 ntTSL 5 BASIC3.55□□□□□ -1.84
Hmgb3O54879 Olfr955-203ENSMUST00000220176 1452 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
Hmgb3O54879 Gabra2-203ENSMUST00000197284 5852 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
Hmgb3O54879 Olfr251-202ENSMUST00000214865 4930 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
Hmgb3O54879 1700017N19Rik-204ENSMUST00000188736 1709 ntTSL 5 BASIC3.54□□□□□ -1.84
Hmgb3O54879 Olfr970-203ENSMUST00000215922 1739 ntAPPRIS P1 TSL 3 BASIC3.54□□□□□ -1.84
Hmgb3O54879 Vmn2r77-201ENSMUST00000164996 2565 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
Hmgb3O54879 Zfp518a-201ENSMUST00000050092 6840 ntAPPRIS P1 TSL 2 BASIC3.54□□□□□ -1.84
Hmgb3O54879 Gm14393-202ENSMUST00000109066 564 ntTSL 2 BASIC3.54□□□□□ -1.84
Hmgb3O54879 Homer1-208ENSMUST00000109495 813 ntTSL 5 BASIC3.54□□□□□ -1.84
Hmgb3O54879 Gm6754-201ENSMUST00000117124 913 ntBASIC3.54□□□□□ -1.84
Hmgb3O54879 Gm8145-201ENSMUST00000118220 745 ntBASIC3.54□□□□□ -1.84
Hmgb3O54879 Gm11894-201ENSMUST00000121579 328 ntBASIC3.54□□□□□ -1.84
Hmgb3O54879 Gm25103-201ENSMUST00000122671 318 ntBASIC3.54□□□□□ -1.84
Hmgb3O54879 1700092C17Rik-201ENSMUST00000135792 424 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
Hmgb3O54879 Gm14011-201ENSMUST00000145178 302 ntTSL 2 BASIC3.54□□□□□ -1.84
Hmgb3O54879 Gm26098-201ENSMUST00000157247 288 ntBASIC3.54□□□□□ -1.84
Hmgb3O54879 Gm22857-201ENSMUST00000174969 134 ntBASIC3.54□□□□□ -1.84
Hmgb3O54879 Gm26871-204ENSMUST00000181310 523 ntTSL 3 BASIC3.54□□□□□ -1.84
Hmgb3O54879 Mir6938-201ENSMUST00000184173 63 ntBASIC3.54□□□□□ -1.84
Hmgb3O54879 Gm28190-201ENSMUST00000189766 722 ntBASIC3.54□□□□□ -1.84
Hmgb3O54879 Gm7967-203ENSMUST00000191409 1049 ntTSL 5 BASIC3.54□□□□□ -1.84
Hmgb3O54879 Gm37815-201ENSMUST00000195665 411 ntTSL 5 BASIC3.54□□□□□ -1.84
Hmgb3O54879 Gm43449-201ENSMUST00000202955 371 ntTSL 3 BASIC3.54□□□□□ -1.84
Hmgb3O54879 Gm6303-201ENSMUST00000210123 471 ntBASIC3.54□□□□□ -1.84
Hmgb3O54879 4930503L19Rik-202ENSMUST00000211817 913 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
Hmgb3O54879 AC132384.13-201ENSMUST00000219556 1159 ntBASIC3.54□□□□□ -1.84
Hmgb3O54879 AC124356.2-201ENSMUST00000221874 336 ntBASIC3.54□□□□□ -1.84
Hmgb3O54879 AC163621.2-201ENSMUST00000222229 682 ntBASIC3.54□□□□□ -1.84
Hmgb3O54879 Gm42986-201ENSMUST00000201618 3385 ntBASIC3.54□□□□□ -1.84
Hmgb3O54879 Olfr270-204ENSMUST00000215127 3145 ntAPPRIS ALT1 TSL 5 BASIC3.54□□□□□ -1.84
Hmgb3O54879 Gm43882-201ENSMUST00000204871 2264 ntBASIC3.54□□□□□ -1.84
Hmgb3O54879 Tug1-201ENSMUST00000132077 6719 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
Hmgb3O54879 Olfr556-203ENSMUST00000217526 3741 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
Hmgb3O54879 Vmn2r35-201ENSMUST00000169683 2586 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
Hmgb3O54879 Vmn2r32-201ENSMUST00000094866 3513 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
Hmgb3O54879 Gm37569-201ENSMUST00000192111 1722 ntBASIC3.53□□□□□ -1.84
Hmgb3O54879 Fbxw23-202ENSMUST00000198480 1388 ntBASIC3.53□□□□□ -1.84
Hmgb3O54879 Gm7269-201ENSMUST00000210819 1373 ntBASIC3.53□□□□□ -1.84
Hmgb3O54879 Olfr726-206ENSMUST00000217025 1363 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
Hmgb3O54879 Tlr3-201ENSMUST00000034056 4407 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
Hmgb3O54879 Gm43781-201ENSMUST00000197634 2681 ntBASIC3.53□□□□□ -1.84
Hmgb3O54879 Gm43341-201ENSMUST00000200104 1308 ntBASIC3.53□□□□□ -1.84
Hmgb3O54879 Vmn1r219-204ENSMUST00000228113 5639 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
Hmgb3O54879 4930528J11Rik-201ENSMUST00000201689 3611 ntBASIC3.53□□□□□ -1.84
Hmgb3O54879 Olfr1353-203ENSMUST00000205193 1924 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
Hmgb3O54879 Igkv4-70-201ENSMUST00000103348 379 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
Hmgb3O54879 Gm22472-201ENSMUST00000104115 134 ntBASIC3.53□□□□□ -1.84
Hmgb3O54879 Gm7834-201ENSMUST00000117560 437 ntBASIC3.53□□□□□ -1.84
Hmgb3O54879 Gm14576-201ENSMUST00000118073 1111 ntBASIC3.53□□□□□ -1.84
Hmgb3O54879 Csnk2a1-ps-201ENSMUST00000118846 1175 ntBASIC3.53□□□□□ -1.84
Hmgb3O54879 Gm13170-201ENSMUST00000119716 643 ntBASIC3.53□□□□□ -1.84
Hmgb3O54879 Gm15141-201ENSMUST00000121860 729 ntBASIC3.53□□□□□ -1.84
Hmgb3O54879 Gm11349-201ENSMUST00000122209 1116 ntBASIC3.53□□□□□ -1.84
Hmgb3O54879 Gm22106-201ENSMUST00000122544 127 ntBASIC3.53□□□□□ -1.84
Hmgb3O54879 Chrna1os-201ENSMUST00000125413 680 ntTSL 3 BASIC3.53□□□□□ -1.84
Hmgb3O54879 Gm13905-201ENSMUST00000140009 579 ntTSL 3 BASIC3.53□□□□□ -1.84
Hmgb3O54879 Crem-219ENSMUST00000140332 1015 ntTSL 5 BASIC3.53□□□□□ -1.84
Hmgb3O54879 Gm15414-201ENSMUST00000155217 440 ntTSL 3 BASIC3.53□□□□□ -1.84
Hmgb3O54879 Gm24689-201ENSMUST00000157760 104 ntBASIC3.53□□□□□ -1.84
Hmgb3O54879 Gm24751-201ENSMUST00000157844 102 ntBASIC3.53□□□□□ -1.84
Hmgb3O54879 Gm24898-201ENSMUST00000158133 106 ntBASIC3.53□□□□□ -1.84
Hmgb3O54879 Gm23700-201ENSMUST00000158842 102 ntBASIC3.53□□□□□ -1.84
Hmgb3O54879 Gm10662-201ENSMUST00000168053 942 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
Hmgb3O54879 Vmn2r-ps35-201ENSMUST00000169206 831 ntBASIC3.53□□□□□ -1.84
Hmgb3O54879 Gm20528-202ENSMUST00000174821 802 ntTSL 3 BASIC3.53□□□□□ -1.84
Hmgb3O54879 Gm5558-201ENSMUST00000178933 495 ntBASIC3.53□□□□□ -1.84
Hmgb3O54879 Gm5891-201ENSMUST00000179493 942 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
Retrieved 100 of 76,532 protein–RNA pairs in 59.1 ms