Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Phf11d-201ENSMUST00000095157 2666 ntAPPRIS P2 TSL 1 (best) BASIC4.54□□□□□ -1.68
Col4a6B1AVK5 C87414-206ENSMUST00000162964 2852 ntAPPRIS P2 TSL 1 (best) BASIC4.53□□□□□ -1.68
Col4a6B1AVK5 Olfr1341-203ENSMUST00000215117 4700 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
Col4a6B1AVK5 Olfr984-203ENSMUST00000214856 5025 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
Col4a6B1AVK5 Gm38105-201ENSMUST00000192112 2621 ntBASIC4.53□□□□□ -1.68
Col4a6B1AVK5 Gm7233-201ENSMUST00000168619 1761 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
Col4a6B1AVK5 Gm37323-201ENSMUST00000195771 2773 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Col4a6B1AVK5 Olfr364-ps1-202ENSMUST00000214905 1914 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
Col4a6B1AVK5 Gm38057-201ENSMUST00000195551 3203 ntBASIC4.53□□□□□ -1.68
Col4a6B1AVK5 Gpm6a-201ENSMUST00000033915 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Col4a6B1AVK5 Vmn1r220-205ENSMUST00000228239 7849 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
Col4a6B1AVK5 Gm2093-201ENSMUST00000180518 3526 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Col4a6B1AVK5 Foxp2-203ENSMUST00000115470 2692 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Col4a6B1AVK5 Rpl35-ps1-201ENSMUST00000118070 372 ntBASIC4.53□□□□□ -1.68
Col4a6B1AVK5 Gm15916-201ENSMUST00000118355 736 ntBASIC4.53□□□□□ -1.68
Col4a6B1AVK5 Gm11598-201ENSMUST00000119257 357 ntBASIC4.53□□□□□ -1.68
Col4a6B1AVK5 Scgb2b22-ps-201ENSMUST00000121947 340 ntBASIC4.53□□□□□ -1.68
Col4a6B1AVK5 Gm16180-201ENSMUST00000128662 312 ntTSL 3 BASIC4.53□□□□□ -1.68
Col4a6B1AVK5 Gm15866-201ENSMUST00000149048 785 ntTSL 5 BASIC4.53□□□□□ -1.68
Col4a6B1AVK5 Gm23098-201ENSMUST00000157552 299 ntBASIC4.53□□□□□ -1.68
Col4a6B1AVK5 Gm23782-201ENSMUST00000157939 120 ntBASIC4.53□□□□□ -1.68
Col4a6B1AVK5 Gm23215-201ENSMUST00000178153 121 ntBASIC4.53□□□□□ -1.68
Col4a6B1AVK5 Il18-202ENSMUST00000180021 702 ntAPPRIS P2 TSL 1 (best) BASIC4.53□□□□□ -1.68
Col4a6B1AVK5 Gm28889-201ENSMUST00000185350 959 ntTSL 5 BASIC4.53□□□□□ -1.68
Col4a6B1AVK5 Gm29426-202ENSMUST00000186564 536 ntTSL 5 BASIC4.53□□□□□ -1.68
Col4a6B1AVK5 Gm29133-201ENSMUST00000189155 885 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
Col4a6B1AVK5 Gm37601-201ENSMUST00000194922 394 ntBASIC4.53□□□□□ -1.68
Col4a6B1AVK5 Gm43304-201ENSMUST00000196803 326 ntBASIC4.53□□□□□ -1.68
Col4a6B1AVK5 2510017J16Rik-201ENSMUST00000198718 1263 ntBASIC4.53□□□□□ -1.68
Col4a6B1AVK5 Gm43376-202ENSMUST00000199747 1743 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Col4a6B1AVK5 1700126H18Rik-201ENSMUST00000201903 405 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Col4a6B1AVK5 Olfr367-ps-203ENSMUST00000213819 541 ntTSL 3 BASIC4.53□□□□□ -1.68
Col4a6B1AVK5 Olfr44-203ENSMUST00000216316 1078 ntAPPRIS ALT2 TSL 3 BASIC4.53□□□□□ -1.68
Col4a6B1AVK5 AC153912.1-201ENSMUST00000217011 724 ntAPPRIS P1 TSL 3 BASIC4.53□□□□□ -1.68
Col4a6B1AVK5 AC168059.1-201ENSMUST00000225846 841 ntBASIC4.53□□□□□ -1.68
Col4a6B1AVK5 AC158142.1-201ENSMUST00000226721 416 ntBASIC4.53□□□□□ -1.68
Col4a6B1AVK5 Il18-201ENSMUST00000059081 702 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
Col4a6B1AVK5 Olfr44-201ENSMUST00000077757 1071 ntAPPRIS P2 TSL 3 BASIC4.53□□□□□ -1.68
Col4a6B1AVK5 Snora7a-201ENSMUST00000082629 140 ntBASIC4.53□□□□□ -1.68
Col4a6B1AVK5 Gm25134-201ENSMUST00000082646 160 ntBASIC4.53□□□□□ -1.68
Col4a6B1AVK5 n-R5s151-201ENSMUST00000083959 119 ntBASIC4.53□□□□□ -1.68
Col4a6B1AVK5 Dach2-202ENSMUST00000113378 2089 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Col4a6B1AVK5 Psg-ps1-202ENSMUST00000206181 1943 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Col4a6B1AVK5 AC115970.1-201ENSMUST00000218910 1758 ntBASIC4.53□□□□□ -1.68
Col4a6B1AVK5 Gm14569-204ENSMUST00000169499 5181 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
Col4a6B1AVK5 Mrc1-201ENSMUST00000028045 5374 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Col4a6B1AVK5 AC155805.1-201ENSMUST00000222419 3808 ntBASIC4.53□□□□□ -1.68
Col4a6B1AVK5 Nlrp4f-201ENSMUST00000037372 3527 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
Col4a6B1AVK5 Vwa5a-201ENSMUST00000001544 4157 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Col4a6B1AVK5 Kcnj1-202ENSMUST00000172015 3075 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Col4a6B1AVK5 AC116797.2-201ENSMUST00000224763 4221 ntBASIC4.53□□□□□ -1.69
Col4a6B1AVK5 Olfr1243-202ENSMUST00000144885 3148 ntAPPRIS P1 TSL 3 BASIC4.52□□□□□ -1.69
Col4a6B1AVK5 Olfr128-202ENSMUST00000216440 3644 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
Col4a6B1AVK5 4930579C12Rik-202ENSMUST00000187015 3676 ntTSL 2 BASIC4.52□□□□□ -1.69
Col4a6B1AVK5 Gabrg2-201ENSMUST00000070725 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC4.52□□□□□ -1.69
Col4a6B1AVK5 Tet1-201ENSMUST00000050826 13986 ntAPPRIS P3 TSL 5 BASIC4.52□□□□□ -1.69
Col4a6B1AVK5 Vmn1r6-207ENSMUST00000228285 7950 ntAPPRIS P2 BASIC4.52□□□□□ -1.69
Col4a6B1AVK5 Zscan4a-201ENSMUST00000210573 2279 ntBASIC4.52□□□□□ -1.69
Col4a6B1AVK5 Zfp972-202ENSMUST00000108934 561 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Col4a6B1AVK5 Gm15014-201ENSMUST00000120742 258 ntBASIC4.52□□□□□ -1.69
Col4a6B1AVK5 Gm15885-201ENSMUST00000122114 388 ntBASIC4.52□□□□□ -1.69
Col4a6B1AVK5 Gm25104-201ENSMUST00000122476 163 ntBASIC4.52□□□□□ -1.69
Col4a6B1AVK5 Gm10357-201ENSMUST00000159886 264 ntBASIC4.52□□□□□ -1.69
Col4a6B1AVK5 Gm17109-201ENSMUST00000163985 358 ntBASIC4.52□□□□□ -1.69
Col4a6B1AVK5 Gm10292-201ENSMUST00000183142 581 ntBASIC4.52□□□□□ -1.69
Col4a6B1AVK5 Mir6996-201ENSMUST00000183922 61 ntBASIC4.52□□□□□ -1.69
Col4a6B1AVK5 Minpp1-ps-201ENSMUST00000203344 946 ntBASIC4.52□□□□□ -1.69
Col4a6B1AVK5 Gm44023-201ENSMUST00000203710 469 ntBASIC4.52□□□□□ -1.69
Col4a6B1AVK5 AC122188.1-201ENSMUST00000217534 312 ntBASIC4.52□□□□□ -1.69
Col4a6B1AVK5 RMST_1.1-204ENSMUST00000217871 699 ntTSL 5 BASIC4.52□□□□□ -1.69
Col4a6B1AVK5 AC100733.1-201ENSMUST00000228494 407 ntBASIC4.52□□□□□ -1.69
Col4a6B1AVK5 Gm5265-201ENSMUST00000076828 342 ntBASIC4.52□□□□□ -1.69
Col4a6B1AVK5 Gm15292-201ENSMUST00000098895 385 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
Col4a6B1AVK5 Cp-203ENSMUST00000108325 3183 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
Col4a6B1AVK5 Rgs17-202ENSMUST00000064225 8191 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Col4a6B1AVK5 Myo3a-201ENSMUST00000044749 5082 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
Col4a6B1AVK5 Gm42717-201ENSMUST00000197309 3463 ntBASIC4.52□□□□□ -1.69
Col4a6B1AVK5 Gm14399-204ENSMUST00000109060 1911 ntAPPRIS P1 TSL 3 BASIC4.52□□□□□ -1.69
Col4a6B1AVK5 Gm43178-201ENSMUST00000197257 1386 ntBASIC4.52□□□□□ -1.69
Col4a6B1AVK5 Spam1-202ENSMUST00000202331 2100 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
Col4a6B1AVK5 Cept1-201ENSMUST00000039153 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Col4a6B1AVK5 Gm20276-201ENSMUST00000216122 2648 ntBASIC4.51□□□□□ -1.69
Col4a6B1AVK5 Vmn1r185-203ENSMUST00000227264 5589 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
Col4a6B1AVK5 Gm26019-201ENSMUST00000104407 119 ntBASIC4.51□□□□□ -1.69
Col4a6B1AVK5 Mir105-201ENSMUST00000104655 80 ntBASIC4.51□□□□□ -1.69
Col4a6B1AVK5 Gm14003-201ENSMUST00000130919 313 ntTSL 3 BASIC4.51□□□□□ -1.69
Col4a6B1AVK5 Gm22059-201ENSMUST00000157544 104 ntBASIC4.51□□□□□ -1.69
Col4a6B1AVK5 Gm20538-201ENSMUST00000166808 225 ntAPPRIS P1 TSL 3 BASIC4.51□□□□□ -1.69
Col4a6B1AVK5 Malat1-203ENSMUST00000173499 485 ntTSL 3 BASIC4.51□□□□□ -1.69
Col4a6B1AVK5 Gm8890-202ENSMUST00000177727 465 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
Col4a6B1AVK5 Gm38061-201ENSMUST00000192490 365 ntBASIC4.51□□□□□ -1.69
Col4a6B1AVK5 Gm37577-203ENSMUST00000194712 991 ntTSL 5 BASIC4.51□□□□□ -1.69
Col4a6B1AVK5 Pgk1-ps3-201ENSMUST00000198338 1201 ntBASIC4.51□□□□□ -1.69
Col4a6B1AVK5 Gm7468-201ENSMUST00000203900 652 ntBASIC4.51□□□□□ -1.69
Col4a6B1AVK5 Gm8820-201ENSMUST00000204077 571 ntBASIC4.51□□□□□ -1.69
Col4a6B1AVK5 Gm44946-201ENSMUST00000208425 572 ntBASIC4.51□□□□□ -1.69
Col4a6B1AVK5 Gm45609-206ENSMUST00000210176 1023 ntTSL 5 BASIC4.51□□□□□ -1.69
Col4a6B1AVK5 Gm3086-202ENSMUST00000221248 310 ntBASIC4.51□□□□□ -1.69
Col4a6B1AVK5 Gm9309-201ENSMUST00000223537 546 ntBASIC4.51□□□□□ -1.69
Col4a6B1AVK5 Gm9964-201ENSMUST00000068448 728 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
Retrieved 100 of 76,532 protein–RNA pairs in 73.3 ms