Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Abca12-201ENSMUST00000087268 9137 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
Col6a4A2AX52 Gm37626-201ENSMUST00000194332 4563 ntBASIC3.64□□□□□ -1.83
Col6a4A2AX52 AC162938.2-205ENSMUST00000217551 2828 ntBASIC3.64□□□□□ -1.83
Col6a4A2AX52 Zfp101-204ENSMUST00000174512 3743 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
Col6a4A2AX52 Cmah-206ENSMUST00000167746 9727 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
Col6a4A2AX52 Gm25764-201ENSMUST00000104092 134 ntBASIC3.64□□□□□ -1.83
Col6a4A2AX52 Gm25833-201ENSMUST00000104137 133 ntBASIC3.64□□□□□ -1.83
Col6a4A2AX52 Gm24788-201ENSMUST00000104283 156 ntBASIC3.64□□□□□ -1.83
Col6a4A2AX52 Fam107b-205ENSMUST00000115055 515 ntAPPRIS P1 TSL 2 BASIC3.64□□□□□ -1.83
Col6a4A2AX52 Gm14308-203ENSMUST00000119149 1458 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
Col6a4A2AX52 Mybpc1-201ENSMUST00000119185 3752 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
Col6a4A2AX52 Gm14434-202ENSMUST00000120959 1458 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
Col6a4A2AX52 Gm26276-201ENSMUST00000157099 109 ntBASIC3.64□□□□□ -1.83
Col6a4A2AX52 Gm9294-201ENSMUST00000165198 789 ntBASIC3.64□□□□□ -1.83
Col6a4A2AX52 Zfp184-205ENSMUST00000176511 2703 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
Col6a4A2AX52 Gm28389-201ENSMUST00000190090 697 ntBASIC3.64□□□□□ -1.83
Col6a4A2AX52 Gm8790-201ENSMUST00000194108 322 ntBASIC3.64□□□□□ -1.83
Col6a4A2AX52 Gm43037-201ENSMUST00000196808 250 ntBASIC3.64□□□□□ -1.83
Col6a4A2AX52 Gm18877-201ENSMUST00000207706 539 ntBASIC3.64□□□□□ -1.83
Col6a4A2AX52 Gm45727-201ENSMUST00000212886 572 ntBASIC3.64□□□□□ -1.83
Col6a4A2AX52 AC139638.1-201ENSMUST00000218027 364 ntBASIC3.64□□□□□ -1.83
Col6a4A2AX52 Gm29968-201ENSMUST00000222815 1387 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
Col6a4A2AX52 Gm9309-201ENSMUST00000223537 546 ntBASIC3.64□□□□□ -1.83
Col6a4A2AX52 AC154738.1-201ENSMUST00000227054 368 ntBASIC3.64□□□□□ -1.83
Col6a4A2AX52 AC134577.1-201ENSMUST00000227572 295 ntBASIC3.64□□□□□ -1.83
Col6a4A2AX52 Ms4a7-201ENSMUST00000025574 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
Col6a4A2AX52 Fbxw26-201ENSMUST00000071917 1824 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
Col6a4A2AX52 Olfr741-201ENSMUST00000071932 936 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
Col6a4A2AX52 Olfr664-201ENSMUST00000072887 966 ntAPPRIS P5 BASIC3.64□□□□□ -1.83
Col6a4A2AX52 Gm7099-201ENSMUST00000080066 554 ntBASIC3.64□□□□□ -1.83
Col6a4A2AX52 Gm25481-201ENSMUST00000083221 158 ntBASIC3.64□□□□□ -1.83
Col6a4A2AX52 9430018G01Rik-201ENSMUST00000203260 3758 ntTSL 5 BASIC3.63□□□□□ -1.83
Col6a4A2AX52 Olfr1271-202ENSMUST00000216383 6613 ntAPPRIS P1 TSL 3 BASIC3.63□□□□□ -1.83
Col6a4A2AX52 AC113059.3-201ENSMUST00000217423 2777 ntBASIC3.63□□□□□ -1.83
Col6a4A2AX52 Olfr1500-202ENSMUST00000214475 2697 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
Col6a4A2AX52 Vmn1r80-206ENSMUST00000228028 6918 ntBASIC3.63□□□□□ -1.83
Col6a4A2AX52 Epha7-203ENSMUST00000108191 6615 ntAPPRIS ALT1 TSL 1 (best) BASIC3.63□□□□□ -1.83
Col6a4A2AX52 Clec2e-201ENSMUST00000032258 2099 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
Col6a4A2AX52 Cdh12-203ENSMUST00000227496 6004 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
Col6a4A2AX52 Mier1-202ENSMUST00000097945 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
Col6a4A2AX52 Gm10287-202ENSMUST00000180599 4059 ntBASIC3.63□□□□□ -1.83
Col6a4A2AX52 Igkv12-98-201ENSMUST00000103327 344 ntAPPRIS ALT2 BASIC3.63□□□□□ -1.83
Col6a4A2AX52 Ighv3-3-201ENSMUST00000103476 296 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
Col6a4A2AX52 Cyp4b1-ps2-201ENSMUST00000119563 333 ntBASIC3.63□□□□□ -1.83
Col6a4A2AX52 Gm11385-201ENSMUST00000121513 570 ntBASIC3.63□□□□□ -1.83
Col6a4A2AX52 Gm25104-201ENSMUST00000122476 163 ntBASIC3.63□□□□□ -1.83
Col6a4A2AX52 Gm16125-201ENSMUST00000159003 339 ntBASIC3.63□□□□□ -1.83
Col6a4A2AX52 Mir1251-201ENSMUST00000175486 84 ntBASIC3.63□□□□□ -1.83
Col6a4A2AX52 Gm27033-201ENSMUST00000183226 544 ntBASIC3.63□□□□□ -1.83
Col6a4A2AX52 Gm28390-201ENSMUST00000185212 700 ntBASIC3.63□□□□□ -1.83
Col6a4A2AX52 Gm38201-201ENSMUST00000192143 387 ntBASIC3.63□□□□□ -1.83
Col6a4A2AX52 Olfr151-201ENSMUST00000211893 1128 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
Col6a4A2AX52 AC162183.1-202ENSMUST00000225434 904 ntBASIC3.63□□□□□ -1.83
Col6a4A2AX52 Olfr1484-201ENSMUST00000074180 948 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
Col6a4A2AX52 Olfr1487-201ENSMUST00000076856 948 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
Col6a4A2AX52 Rpl36a-ps1-201ENSMUST00000081987 449 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
Col6a4A2AX52 n-R5s3-201ENSMUST00000083879 112 ntBASIC3.63□□□□□ -1.83
Col6a4A2AX52 Ccr2-204ENSMUST00000171719 2265 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
Col6a4A2AX52 Olfr887-202ENSMUST00000212502 6281 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
Col6a4A2AX52 Dnah12-201ENSMUST00000022433 12009 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
Col6a4A2AX52 Fam205c-202ENSMUST00000107978 1451 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
Col6a4A2AX52 Gm37212-201ENSMUST00000192582 3650 ntBASIC3.63□□□□□ -1.83
Col6a4A2AX52 Gm24281-201ENSMUST00000104234 136 ntBASIC3.62□□□□□ -1.83
Col6a4A2AX52 Gm23959-201ENSMUST00000157208 324 ntBASIC3.62□□□□□ -1.83
Col6a4A2AX52 Gm7876-201ENSMUST00000169465 984 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
Col6a4A2AX52 Vmn2r-ps134-201ENSMUST00000176907 1046 ntBASIC3.62□□□□□ -1.83
Col6a4A2AX52 Scgb2b6-201ENSMUST00000188132 330 ntBASIC3.62□□□□□ -1.83
Col6a4A2AX52 Gm37682-201ENSMUST00000191776 522 ntBASIC3.62□□□□□ -1.83
Col6a4A2AX52 Trbv28-201ENSMUST00000192804 264 ntBASIC3.62□□□□□ -1.83
Col6a4A2AX52 Gm42983-201ENSMUST00000199879 815 ntBASIC3.62□□□□□ -1.83
Col6a4A2AX52 Gm35865-201ENSMUST00000220180 287 ntTSL 3 BASIC3.62□□□□□ -1.83
Col6a4A2AX52 AC164883.9-201ENSMUST00000228042 399 ntBASIC3.62□□□□□ -1.83
Col6a4A2AX52 Olfr13-202ENSMUST00000216179 3677 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
Col6a4A2AX52 Obscn-203ENSMUST00000052872 23006 ntTSL 5 BASIC3.62□□□□□ -1.83
Col6a4A2AX52 Zfp595-201ENSMUST00000109735 3896 ntAPPRIS P2 TSL 1 (best) BASIC3.62□□□□□ -1.83
Col6a4A2AX52 CT025675.1-201ENSMUST00000228171 1567 ntBASIC3.62□□□□□ -1.83
Col6a4A2AX52 1700097M23Rik-201ENSMUST00000204079 1522 ntBASIC3.62□□□□□ -1.83
Col6a4A2AX52 Lypd6-205ENSMUST00000169232 3499 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
Col6a4A2AX52 AC127371.2-201ENSMUST00000228108 1933 ntBASIC3.62□□□□□ -1.83
Col6a4A2AX52 Olfr419-202ENSMUST00000214725 2685 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
Col6a4A2AX52 Gm12704-201ENSMUST00000119789 464 ntBASIC3.62□□□□□ -1.83
Col6a4A2AX52 Sult2a4-202ENSMUST00000165167 964 ntAPPRIS P2 TSL 5 BASIC3.62□□□□□ -1.83
Col6a4A2AX52 Gm17046-201ENSMUST00000168078 850 ntBASIC3.62□□□□□ -1.83
Col6a4A2AX52 Gm20822-202ENSMUST00000188422 1229 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
Col6a4A2AX52 Gm20828-202ENSMUST00000190516 1229 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
Col6a4A2AX52 Gm5876-201ENSMUST00000203735 243 ntBASIC3.62□□□□□ -1.83
Col6a4A2AX52 Gm30954-201ENSMUST00000208715 1210 ntTSL 5 BASIC3.62□□□□□ -1.83
Col6a4A2AX52 AC156504.1-201ENSMUST00000214608 157 ntBASIC3.62□□□□□ -1.83
Col6a4A2AX52 Gm18891-201ENSMUST00000216734 1087 ntBASIC3.62□□□□□ -1.83
Col6a4A2AX52 Gm7119-201ENSMUST00000221345 695 ntBASIC3.62□□□□□ -1.83
Col6a4A2AX52 Gnrh1-202ENSMUST00000223929 428 ntBASIC3.62□□□□□ -1.83
Col6a4A2AX52 Vmn1r28-203ENSMUST00000228678 909 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
Col6a4A2AX52 Olfr870-201ENSMUST00000086476 936 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
Col6a4A2AX52 Clec5a-202ENSMUST00000101491 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
Col6a4A2AX52 Jmjd1c-206ENSMUST00000173689 8609 ntAPPRIS ALT2 TSL 2 BASIC3.62□□□□□ -1.83
Col6a4A2AX52 Olfr1338-203ENSMUST00000216559 2829 ntAPPRIS ALT1 TSL 5 BASIC3.62□□□□□ -1.83
Col6a4A2AX52 Olfr1263-202ENSMUST00000214382 4400 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
Col6a4A2AX52 Gm43374-201ENSMUST00000202498 2391 ntBASIC3.62□□□□□ -1.83
Col6a4A2AX52 Nlrp9b-201ENSMUST00000073151 3346 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
Col6a4A2AX52 Igkv14-100-201ENSMUST00000103325 350 ntAPPRIS ALT2 BASIC3.61□□□□□ -1.83
Retrieved 100 of 76,532 protein–RNA pairs in 56.9 ms