Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 Gm43774-201ENSMUST00000196327 878 ntBASIC4.48□□□□□ -1.69
Scn1aA2APX8 Gm17780-201ENSMUST00000207142 612 ntBASIC4.48□□□□□ -1.69
Scn1aA2APX8 AC132324.1-201ENSMUST00000221855 584 ntTSL 5 BASIC4.48□□□□□ -1.69
Scn1aA2APX8 9430031K09Rik-201ENSMUST00000222913 925 ntBASIC4.48□□□□□ -1.69
Scn1aA2APX8 AC122397.2-201ENSMUST00000227422 686 ntBASIC4.48□□□□□ -1.69
Scn1aA2APX8 Rbm41-204ENSMUST00000113011 3728 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
Scn1aA2APX8 Zfp738-203ENSMUST00000137496 13215 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
Scn1aA2APX8 Uhmk1-203ENSMUST00000150821 7676 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
Scn1aA2APX8 Fzd3-202ENSMUST00000131309 12734 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
Scn1aA2APX8 Olfr228-202ENSMUST00000217292 1854 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
Scn1aA2APX8 AI481877-201ENSMUST00000107547 4664 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
Scn1aA2APX8 Olfr1204-202ENSMUST00000213283 6935 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
Scn1aA2APX8 Vmn1r80-206ENSMUST00000228028 6918 ntBASIC4.48□□□□□ -1.69
Scn1aA2APX8 Olfr769-202ENSMUST00000215453 4143 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
Scn1aA2APX8 AC154329.1-201ENSMUST00000224408 3129 ntBASIC4.48□□□□□ -1.69
Scn1aA2APX8 Olfr1500-202ENSMUST00000214475 2697 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
Scn1aA2APX8 Olfr843-203ENSMUST00000214267 7071 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
Scn1aA2APX8 Vmn1r210-203ENSMUST00000226294 3500 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
Scn1aA2APX8 Gm15166-201ENSMUST00000120790 385 ntBASIC4.48□□□□□ -1.69
Scn1aA2APX8 Mir3104-201ENSMUST00000174911 63 ntBASIC4.48□□□□□ -1.69
Scn1aA2APX8 Obox4-ps15-201ENSMUST00000178057 1140 ntBASIC4.48□□□□□ -1.69
Scn1aA2APX8 Obox4-ps19-201ENSMUST00000178284 1140 ntBASIC4.48□□□□□ -1.69
Scn1aA2APX8 Obox4-ps20-201ENSMUST00000179591 1140 ntBASIC4.48□□□□□ -1.69
Scn1aA2APX8 Obox4-ps21-201ENSMUST00000179856 1140 ntBASIC4.48□□□□□ -1.69
Scn1aA2APX8 Gm3259-205ENSMUST00000185432 1077 ntTSL 3 BASIC4.48□□□□□ -1.69
Scn1aA2APX8 AC122317.1-201ENSMUST00000218404 708 ntTSL 5 BASIC4.48□□□□□ -1.69
Scn1aA2APX8 4930563J15Rik-203ENSMUST00000219796 574 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
Scn1aA2APX8 Mir27a-201ENSMUST00000083510 87 ntBASIC4.48□□□□□ -1.69
Scn1aA2APX8 Vmn1r43-203ENSMUST00000226741 12542 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
Scn1aA2APX8 Btbd35f12-201ENSMUST00000178827 1908 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
Scn1aA2APX8 Gm26835-201ENSMUST00000181888 3274 ntTSL 5 BASIC4.47□□□□□ -1.69
Scn1aA2APX8 Gm8104-201ENSMUST00000168165 1761 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
Scn1aA2APX8 Slfn8-202ENSMUST00000092838 3529 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
Scn1aA2APX8 Gm43870-201ENSMUST00000205102 4369 ntBASIC4.47□□□□□ -1.69
Scn1aA2APX8 AC139754.3-201ENSMUST00000220444 1627 ntBASIC4.47□□□□□ -1.69
Scn1aA2APX8 Gm42616-201ENSMUST00000198989 4184 ntBASIC4.47□□□□□ -1.69
Scn1aA2APX8 Gm11255-201ENSMUST00000120448 1180 ntBASIC4.47□□□□□ -1.69
Scn1aA2APX8 Airn-203ENSMUST00000159791 485 ntTSL 3 BASIC4.47□□□□□ -1.69
Scn1aA2APX8 Mir3058-201ENSMUST00000175126 91 ntBASIC4.47□□□□□ -1.69
Scn1aA2APX8 Gm27899-201ENSMUST00000184715 64 ntBASIC4.47□□□□□ -1.69
Scn1aA2APX8 Gm29634-201ENSMUST00000188467 696 ntBASIC4.47□□□□□ -1.69
Scn1aA2APX8 Gm28699-201ENSMUST00000189193 696 ntBASIC4.47□□□□□ -1.69
Scn1aA2APX8 Gm43635-201ENSMUST00000202533 352 ntTSL 3 BASIC4.47□□□□□ -1.69
Scn1aA2APX8 Olfr1315-ps1-201ENSMUST00000207542 1230 ntAPPRIS P5 TSL 5 BASIC4.47□□□□□ -1.69
Scn1aA2APX8 Gm35325-201ENSMUST00000208979 771 ntTSL 2 BASIC4.47□□□□□ -1.69
Scn1aA2APX8 Gm5339-201ENSMUST00000210551 1102 ntBASIC4.47□□□□□ -1.69
Scn1aA2APX8 Dppa3-201ENSMUST00000049644 833 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
Scn1aA2APX8 Oog1-201ENSMUST00000095509 1801 ntAPPRIS P2 TSL 1 (best) BASIC4.47□□□□□ -1.69
Scn1aA2APX8 Abcg3-202ENSMUST00000130644 2668 ntTSL 5 BASIC4.47□□□□□ -1.69
Scn1aA2APX8 Gm42991-201ENSMUST00000196468 3837 ntBASIC4.47□□□□□ -1.69
Scn1aA2APX8 Gm37569-201ENSMUST00000192111 1722 ntBASIC4.47□□□□□ -1.69
Scn1aA2APX8 Adam26a-201ENSMUST00000049577 2489 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
Scn1aA2APX8 Fam111a-201ENSMUST00000025595 3267 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
Scn1aA2APX8 Ankrd28-204ENSMUST00000227089 3522 ntBASIC4.47□□□□□ -1.69
Scn1aA2APX8 4930510E17Rik-201ENSMUST00000034550 1639 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
Scn1aA2APX8 Fbxl13-202ENSMUST00000115234 2143 ntTSL 5 BASIC4.47□□□□□ -1.69
Scn1aA2APX8 Gm13686-201ENSMUST00000122851 350 ntTSL 3 BASIC4.46□□□□□ -1.69
Scn1aA2APX8 Gm29094-201ENSMUST00000138109 664 ntAPPRIS P1 TSL 4 BASIC4.46□□□□□ -1.69
Scn1aA2APX8 Gm22277-201ENSMUST00000157204 277 ntBASIC4.46□□□□□ -1.69
Scn1aA2APX8 Gm29161-201ENSMUST00000188250 699 ntBASIC4.46□□□□□ -1.69
Scn1aA2APX8 Gm21803-201ENSMUST00000188897 693 ntBASIC4.46□□□□□ -1.69
Scn1aA2APX8 Gm17951-201ENSMUST00000198536 496 ntBASIC4.46□□□□□ -1.69
Scn1aA2APX8 Gm44278-201ENSMUST00000204082 312 ntTSL 2 BASIC4.46□□□□□ -1.69
Scn1aA2APX8 Gm44650-201ENSMUST00000206929 194 ntBASIC4.46□□□□□ -1.69
Scn1aA2APX8 Lyrm1-209ENSMUST00000208424 888 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
Scn1aA2APX8 AC110816.1-201ENSMUST00000218559 980 ntBASIC4.46□□□□□ -1.69
Scn1aA2APX8 Klrc1-202ENSMUST00000032271 822 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.69
Scn1aA2APX8 Gm7381-201ENSMUST00000098958 300 ntBASIC4.46□□□□□ -1.69
Scn1aA2APX8 Grin2b-201ENSMUST00000053880 24060 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.69
Scn1aA2APX8 Gm45378-201ENSMUST00000211063 2711 ntBASIC4.46□□□□□ -1.69
Scn1aA2APX8 Slc10a2-201ENSMUST00000023835 4152 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
Scn1aA2APX8 Prrc2c-202ENSMUST00000182149 11289 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
Scn1aA2APX8 Hc-201ENSMUST00000028233 5445 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
Scn1aA2APX8 Olfr1501-202ENSMUST00000208493 4230 ntAPPRIS P1 TSL 2 BASIC4.46□□□□□ -1.7
Scn1aA2APX8 Gm38081-201ENSMUST00000192680 1645 ntBASIC4.46□□□□□ -1.7
Scn1aA2APX8 Gm281-201ENSMUST00000144914 2952 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
Scn1aA2APX8 Stxbp4-207ENSMUST00000143203 5985 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
Scn1aA2APX8 Olfr291-202ENSMUST00000217039 3471 ntAPPRIS ALT2 TSL 2 BASIC4.46□□□□□ -1.7
Scn1aA2APX8 Gm23133-201ENSMUST00000104255 135 ntBASIC4.46□□□□□ -1.7
Scn1aA2APX8 Gm13501-201ENSMUST00000118477 979 ntBASIC4.46□□□□□ -1.7
Scn1aA2APX8 Gm14282-201ENSMUST00000119484 240 ntBASIC4.46□□□□□ -1.7
Scn1aA2APX8 Gm12994-201ENSMUST00000119601 447 ntBASIC4.46□□□□□ -1.7
Scn1aA2APX8 Gm15885-201ENSMUST00000122114 388 ntBASIC4.46□□□□□ -1.7
Scn1aA2APX8 Gm12885-201ENSMUST00000122246 328 ntBASIC4.46□□□□□ -1.7
Scn1aA2APX8 Tmsb15l-201ENSMUST00000127404 816 ntAPPRIS P1 TSL 2 BASIC4.46□□□□□ -1.7
Scn1aA2APX8 Gm15350-201ENSMUST00000135138 569 ntTSL 2 BASIC4.46□□□□□ -1.7
Scn1aA2APX8 Gm26373-201ENSMUST00000157833 103 ntBASIC4.46□□□□□ -1.7
Scn1aA2APX8 Nutf2-ps2-201ENSMUST00000179225 384 ntBASIC4.46□□□□□ -1.7
Scn1aA2APX8 Olfr367-ps-203ENSMUST00000213819 541 ntTSL 3 BASIC4.46□□□□□ -1.7
Scn1aA2APX8 AC154368.1-201ENSMUST00000223465 205 ntTSL 5 BASIC4.46□□□□□ -1.7
Scn1aA2APX8 AC139750.2-201ENSMUST00000224424 386 ntBASIC4.46□□□□□ -1.7
Scn1aA2APX8 Tas2r110-201ENSMUST00000082014 1002 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
Scn1aA2APX8 Olfr338-202ENSMUST00000091006 921 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
Scn1aA2APX8 Ktn1-215ENSMUST00000189101 3761 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
Scn1aA2APX8 Olfr1387-202ENSMUST00000214541 4840 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
Scn1aA2APX8 Gm29260-201ENSMUST00000186391 2759 ntTSL 3 BASIC4.45□□□□□ -1.7
Scn1aA2APX8 Pih1d3-201ENSMUST00000027230 1451 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
Scn1aA2APX8 Gm7903-201ENSMUST00000113172 3677 ntAPPRIS P2 TSL 1 (best) BASIC4.45□□□□□ -1.7
Scn1aA2APX8 Gm5128-201ENSMUST00000113173 3677 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
Scn1aA2APX8 4430402I18Rik-203ENSMUST00000160542 1057 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Retrieved 100 of 76,532 protein–RNA pairs in 64.7 ms