Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Gm29085-201ENSMUST00000187108 225 ntBASIC4.45□□□□□ -1.7
H2afb2S4R1M3 1700010I02Rik-201ENSMUST00000187729 438 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
H2afb2S4R1M3 Gm29133-201ENSMUST00000189155 885 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
H2afb2S4R1M3 B230110G15Rik-201ENSMUST00000190868 772 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
H2afb2S4R1M3 Gm29522-201ENSMUST00000191530 621 ntTSL 5 BASIC4.45□□□□□ -1.7
H2afb2S4R1M3 2900037B21Rik-201ENSMUST00000194352 337 ntBASIC4.45□□□□□ -1.7
H2afb2S4R1M3 Gm45171-201ENSMUST00000206360 736 ntBASIC4.45□□□□□ -1.7
H2afb2S4R1M3 Gm33501-201ENSMUST00000209257 1193 ntTSL 5 BASIC4.45□□□□□ -1.7
H2afb2S4R1M3 Gm45499-201ENSMUST00000211656 280 ntBASIC4.45□□□□□ -1.7
H2afb2S4R1M3 AC109180.1-201ENSMUST00000218676 398 ntBASIC4.45□□□□□ -1.7
H2afb2S4R1M3 AC138330.1-201ENSMUST00000220690 1127 ntTSL 5 BASIC4.45□□□□□ -1.7
H2afb2S4R1M3 Vmn1r35-201ENSMUST00000071414 891 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
H2afb2S4R1M3 Gm16442-201ENSMUST00000079099 924 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
H2afb2S4R1M3 Mir202-201ENSMUST00000083568 72 ntBASIC4.45□□□□□ -1.7
H2afb2S4R1M3 Mir99a-201ENSMUST00000083596 65 ntBASIC4.45□□□□□ -1.7
H2afb2S4R1M3 Olfr18-201ENSMUST00000086473 1156 ntAPPRIS P2 TSL 1 (best) BASIC4.45□□□□□ -1.7
H2afb2S4R1M3 Defa36-201ENSMUST00000095424 420 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
H2afb2S4R1M3 1700017N19Rik-204ENSMUST00000188736 1709 ntTSL 5 BASIC4.45□□□□□ -1.7
H2afb2S4R1M3 Gm18719-201ENSMUST00000196696 1413 ntBASIC4.45□□□□□ -1.7
H2afb2S4R1M3 Olfr235-204ENSMUST00000214613 2217 ntAPPRIS P1 TSL 3 BASIC4.45□□□□□ -1.7
H2afb2S4R1M3 Olfr588-ps1-201ENSMUST00000118682 4607 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
H2afb2S4R1M3 Gpr21-201ENSMUST00000065441 3619 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
H2afb2S4R1M3 Zp3r-201ENSMUST00000039862 2042 ntAPPRIS P2 TSL 1 (best) BASIC4.45□□□□□ -1.7
H2afb2S4R1M3 Gm43668-201ENSMUST00000197014 5342 ntBASIC4.44□□□□□ -1.7
H2afb2S4R1M3 Fnbp1l-203ENSMUST00000162947 1830 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
H2afb2S4R1M3 Pax6os1-202ENSMUST00000149133 1464 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
H2afb2S4R1M3 Dnah3-201ENSMUST00000046993 12252 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
H2afb2S4R1M3 9430018G01Rik-201ENSMUST00000203260 3758 ntTSL 5 BASIC4.44□□□□□ -1.7
H2afb2S4R1M3 Gm26760-201ENSMUST00000181901 1604 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
H2afb2S4R1M3 Olfr1283-202ENSMUST00000204064 1625 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
H2afb2S4R1M3 Vmn2r-ps5-201ENSMUST00000175971 2730 ntBASIC4.44□□□□□ -1.7
H2afb2S4R1M3 Gm23014-201ENSMUST00000104144 130 ntBASIC4.44□□□□□ -1.7
H2afb2S4R1M3 Gm12520-201ENSMUST00000117493 316 ntBASIC4.44□□□□□ -1.7
H2afb2S4R1M3 Gm15058-201ENSMUST00000117689 458 ntBASIC4.44□□□□□ -1.7
H2afb2S4R1M3 Gm6062-201ENSMUST00000120462 631 ntBASIC4.44□□□□□ -1.7
H2afb2S4R1M3 Olfr660-ps1-201ENSMUST00000121526 375 ntBASIC4.44□□□□□ -1.7
H2afb2S4R1M3 Gm14840-201ENSMUST00000122135 594 ntBASIC4.44□□□□□ -1.7
H2afb2S4R1M3 4930412F09Rik-201ENSMUST00000139006 1017 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
H2afb2S4R1M3 Gm15940-201ENSMUST00000156011 817 ntTSL 3 BASIC4.44□□□□□ -1.7
H2afb2S4R1M3 Gm22968-201ENSMUST00000157955 118 ntBASIC4.44□□□□□ -1.7
H2afb2S4R1M3 C530043A13Rik-201ENSMUST00000186453 550 ntTSL 3 BASIC4.44□□□□□ -1.7
H2afb2S4R1M3 Gm4412-201ENSMUST00000186660 433 ntBASIC4.44□□□□□ -1.7
H2afb2S4R1M3 Gm29044-202ENSMUST00000188980 300 ntTSL 5 BASIC4.44□□□□□ -1.7
H2afb2S4R1M3 C030032O16Rik-201ENSMUST00000196427 716 ntBASIC4.44□□□□□ -1.7
H2afb2S4R1M3 Gm43655-201ENSMUST00000197367 222 ntBASIC4.44□□□□□ -1.7
H2afb2S4R1M3 5430434I15Rik-201ENSMUST00000197658 1257 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
H2afb2S4R1M3 Gm43580-201ENSMUST00000202892 284 ntBASIC4.44□□□□□ -1.7
H2afb2S4R1M3 Mitf-208ENSMUST00000203938 1074 ntTSL 5 BASIC4.44□□□□□ -1.7
H2afb2S4R1M3 Olfr151-201ENSMUST00000211893 1128 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
H2afb2S4R1M3 Gm20946-201ENSMUST00000212367 461 ntBASIC4.44□□□□□ -1.7
H2afb2S4R1M3 AC153955.1-201ENSMUST00000217458 663 ntTSL 3 BASIC4.44□□□□□ -1.7
H2afb2S4R1M3 Gm34609-201ENSMUST00000219284 789 ntTSL 5 BASIC4.44□□□□□ -1.7
H2afb2S4R1M3 Gm7045-201ENSMUST00000221466 605 ntBASIC4.44□□□□□ -1.7
H2afb2S4R1M3 Spink7-201ENSMUST00000076194 258 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
H2afb2S4R1M3 Olfr804-201ENSMUST00000077312 945 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
H2afb2S4R1M3 Gm22826-201ENSMUST00000083774 165 ntBASIC4.44□□□□□ -1.7
H2afb2S4R1M3 Cd59b-201ENSMUST00000090429 796 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
H2afb2S4R1M3 Neat1-201ENSMUST00000173672 20771 ntBASIC4.44□□□□□ -1.7
H2afb2S4R1M3 Vmn2r86-201ENSMUST00000170257 3039 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
H2afb2S4R1M3 Sirpb1a-201ENSMUST00000099201 1419 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
H2afb2S4R1M3 Usp15-211ENSMUST00000220377 11525 ntAPPRIS P2 TSL 1 (best) BASIC4.44□□□□□ -1.7
H2afb2S4R1M3 Olfr1252-203ENSMUST00000216203 3243 ntAPPRIS P1 TSL 3 BASIC4.44□□□□□ -1.7
H2afb2S4R1M3 Ankrd31-201ENSMUST00000207464 5146 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
H2afb2S4R1M3 Gm2004-201ENSMUST00000109049 1749 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
H2afb2S4R1M3 Gm14419-202ENSMUST00000126358 1749 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
H2afb2S4R1M3 Olfr1258-203ENSMUST00000213720 7098 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
H2afb2S4R1M3 Olfr266-202ENSMUST00000213616 2195 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
H2afb2S4R1M3 Gm4631-202ENSMUST00000121393 4402 ntAPPRIS P1 TSL 2 BASIC4.43□□□□□ -1.7
H2afb2S4R1M3 Gm36529-201ENSMUST00000222495 1529 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
H2afb2S4R1M3 Rabgap1-202ENSMUST00000066055 4247 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
H2afb2S4R1M3 Gm22473-201ENSMUST00000104114 132 ntBASIC4.43□□□□□ -1.7
H2afb2S4R1M3 Mir105-201ENSMUST00000104655 80 ntBASIC4.43□□□□□ -1.7
H2afb2S4R1M3 Gm12789-202ENSMUST00000106915 495 ntAPPRIS P1 TSL 3 BASIC4.43□□□□□ -1.7
H2afb2S4R1M3 Gm12719-201ENSMUST00000118859 241 ntBASIC4.43□□□□□ -1.7
H2afb2S4R1M3 Gm12105-201ENSMUST00000120846 779 ntBASIC4.43□□□□□ -1.7
H2afb2S4R1M3 Gm13460-201ENSMUST00000121274 353 ntBASIC4.43□□□□□ -1.7
H2afb2S4R1M3 Gm12005-201ENSMUST00000121451 379 ntBASIC4.43□□□□□ -1.7
H2afb2S4R1M3 Gm13745-201ENSMUST00000121994 527 ntBASIC4.43□□□□□ -1.7
H2afb2S4R1M3 Gm12974-201ENSMUST00000129875 333 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
H2afb2S4R1M3 Ugt2a2-202ENSMUST00000144144 929 ntTSL 2 BASIC4.43□□□□□ -1.7
H2afb2S4R1M3 Trbv10-201ENSMUST00000168322 289 ntBASIC4.43□□□□□ -1.7
H2afb2S4R1M3 Vmn2r-ps64-201ENSMUST00000173690 523 ntBASIC4.43□□□□□ -1.7
H2afb2S4R1M3 Gm20674-201ENSMUST00000177452 369 ntBASIC4.43□□□□□ -1.7
H2afb2S4R1M3 Mir7006-201ENSMUST00000183624 69 ntBASIC4.43□□□□□ -1.7
H2afb2S4R1M3 Lockd-204ENSMUST00000184991 243 ntTSL 5 BASIC4.43□□□□□ -1.7
H2afb2S4R1M3 1700047N06Rik-201ENSMUST00000194474 920 ntBASIC4.43□□□□□ -1.7
H2afb2S4R1M3 Gm18445-201ENSMUST00000195502 774 ntBASIC4.43□□□□□ -1.7
H2afb2S4R1M3 Gm43344-201ENSMUST00000198723 1229 ntBASIC4.43□□□□□ -1.7
H2afb2S4R1M3 Gm40323-201ENSMUST00000200649 645 ntTSL 2 BASIC4.43□□□□□ -1.7
H2afb2S4R1M3 Gm46190-201ENSMUST00000219650 427 ntBASIC4.43□□□□□ -1.7
H2afb2S4R1M3 Reg3g-201ENSMUST00000032089 771 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
H2afb2S4R1M3 Spata19-201ENSMUST00000034473 697 ntAPPRIS P2 TSL 1 (best) BASIC4.43□□□□□ -1.7
H2afb2S4R1M3 Olfr393-202ENSMUST00000213365 4048 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
H2afb2S4R1M3 Fbxl13-202ENSMUST00000115234 2143 ntTSL 5 BASIC4.43□□□□□ -1.7
H2afb2S4R1M3 Olfr1000-203ENSMUST00000216571 2028 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
H2afb2S4R1M3 Olfr1197-202ENSMUST00000213118 2899 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
H2afb2S4R1M3 Vmn1r90-207ENSMUST00000227692 7101 ntAPPRIS P2 BASIC4.43□□□□□ -1.7
H2afb2S4R1M3 Cep290-206ENSMUST00000219765 7985 ntTSL 5 BASIC4.43□□□□□ -1.7
H2afb2S4R1M3 Zfp458-204ENSMUST00000225772 3485 ntAPPRIS ALT2 BASIC4.42□□□□□ -1.7
H2afb2S4R1M3 Gm37053-201ENSMUST00000192399 2087 ntBASIC4.42□□□□□ -1.7
Retrieved 100 of 76,532 protein–RNA pairs in 82.5 ms