Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 Rab26os-202ENSMUST00000176921 298 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Trim42Q9D2H5 Gm10428-201ENSMUST00000178750 399 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Trim42Q9D2H5 Gm9457-201ENSMUST00000180176 372 ntBASIC6.19□□□□□ -1.42
Trim42Q9D2H5 Snhg5-201ENSMUST00000180563 1004 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Trim42Q9D2H5 Igkv19-93-201ENSMUST00000183936 344 ntAPPRIS ALT2 BASIC6.19□□□□□ -1.42
Trim42Q9D2H5 Gm29045-201ENSMUST00000187278 698 ntBASIC6.19□□□□□ -1.42
Trim42Q9D2H5 Gm28357-201ENSMUST00000190256 622 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Trim42Q9D2H5 Gm5853-201ENSMUST00000197183 632 ntBASIC6.19□□□□□ -1.42
Trim42Q9D2H5 Gm43494-201ENSMUST00000197672 388 ntBASIC6.19□□□□□ -1.42
Trim42Q9D2H5 Olfr436-ps1-201ENSMUST00000203108 284 ntBASIC6.19□□□□□ -1.42
Trim42Q9D2H5 Gm17908-201ENSMUST00000205552 1256 ntBASIC6.19□□□□□ -1.42
Trim42Q9D2H5 Gm36633-201ENSMUST00000205873 647 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Trim42Q9D2H5 Gm7760-201ENSMUST00000212265 578 ntBASIC6.19□□□□□ -1.42
Trim42Q9D2H5 Gm7807-201ENSMUST00000212475 578 ntBASIC6.19□□□□□ -1.42
Trim42Q9D2H5 Prl3d3-202ENSMUST00000223958 675 ntAPPRIS ALT2 BASIC6.19□□□□□ -1.42
Trim42Q9D2H5 Gm22365-201ENSMUST00000093750 117 ntBASIC6.19□□□□□ -1.42
Trim42Q9D2H5 Gm6166-201ENSMUST00000098689 409 ntBASIC6.19□□□□□ -1.42
Trim42Q9D2H5 Olfr432-202ENSMUST00000213211 4435 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Trim42Q9D2H5 AC132852.2-201ENSMUST00000216052 2794 ntBASIC6.19□□□□□ -1.42
Trim42Q9D2H5 Mdn1-211ENSMUST00000178134 17959 ntAPPRIS P2 TSL 5 BASIC6.19□□□□□ -1.42
Trim42Q9D2H5 AC151971.5-202ENSMUST00000215946 3188 ntTSL 5 BASIC6.19□□□□□ -1.42
Trim42Q9D2H5 Cep57l1-202ENSMUST00000105505 2071 ntAPPRIS P3 TSL 5 BASIC6.19□□□□□ -1.42
Trim42Q9D2H5 Cnga1-204ENSMUST00000169997 2251 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Trim42Q9D2H5 Iqca-201ENSMUST00000113094 3210 ntAPPRIS P2 TSL 5 BASIC6.19□□□□□ -1.42
Trim42Q9D2H5 1700097M23Rik-201ENSMUST00000204079 1522 ntBASIC6.19□□□□□ -1.42
Trim42Q9D2H5 Nqo2-202ENSMUST00000058978 3842 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Trim42Q9D2H5 Stx17-202ENSMUST00000107720 5770 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Trim42Q9D2H5 Creb5-203ENSMUST00000203528 7917 ntAPPRIS P2 TSL 5 BASIC6.19□□□□□ -1.42
Trim42Q9D2H5 Alkbh8-204ENSMUST00000211933 7674 ntAPPRIS P2 TSL 1 (best) BASIC6.18□□□□□ -1.42
Trim42Q9D2H5 Ccdc7a-205ENSMUST00000214889 5544 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
Trim42Q9D2H5 Vmn1r44-205ENSMUST00000226345 1965 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Trim42Q9D2H5 Olfr1499-202ENSMUST00000216659 1834 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Trim42Q9D2H5 Olfr919-203ENSMUST00000217508 1843 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
Trim42Q9D2H5 Ifi205-201ENSMUST00000059226 1613 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Trim42Q9D2H5 Gm28928-201ENSMUST00000187286 1443 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Trim42Q9D2H5 A230103L15Rik-201ENSMUST00000207198 3872 ntBASIC6.18□□□□□ -1.42
Trim42Q9D2H5 Gm43627-201ENSMUST00000197119 2299 ntBASIC6.18□□□□□ -1.42
Trim42Q9D2H5 Kcnma1-202ENSMUST00000074983 3974 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
Trim42Q9D2H5 Phc3-209ENSMUST00000168645 10976 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
Trim42Q9D2H5 Ighv1-66-201ENSMUST00000103537 399 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Trim42Q9D2H5 Trav8n-2-201ENSMUST00000103632 408 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Trim42Q9D2H5 Gm24989-201ENSMUST00000104461 88 ntBASIC6.18□□□□□ -1.42
Trim42Q9D2H5 H2al2a-201ENSMUST00000105001 542 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Trim42Q9D2H5 Gstm7-202ENSMUST00000106687 743 ntTSL 3 BASIC6.18□□□□□ -1.42
Trim42Q9D2H5 Defb45-201ENSMUST00000109834 385 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Trim42Q9D2H5 Cav1-203ENSMUST00000115454 613 ntTSL 2 BASIC6.18□□□□□ -1.42
Trim42Q9D2H5 Gm13193-201ENSMUST00000117275 225 ntBASIC6.18□□□□□ -1.42
Trim42Q9D2H5 Vmn1r-ps125-201ENSMUST00000117767 290 ntBASIC6.18□□□□□ -1.42
Trim42Q9D2H5 Gm11889-201ENSMUST00000118402 1079 ntBASIC6.18□□□□□ -1.42
Trim42Q9D2H5 Atf1-ps-201ENSMUST00000120608 810 ntBASIC6.18□□□□□ -1.42
Trim42Q9D2H5 Gm11726-201ENSMUST00000121028 424 ntBASIC6.18□□□□□ -1.42
Trim42Q9D2H5 Gm12596-201ENSMUST00000124589 673 ntTSL 3 BASIC6.18□□□□□ -1.42
Trim42Q9D2H5 Gm12027-201ENSMUST00000146531 949 ntTSL 5 BASIC6.18□□□□□ -1.42
Trim42Q9D2H5 Gm22236-201ENSMUST00000157093 106 ntBASIC6.18□□□□□ -1.42
Trim42Q9D2H5 Gm16113-201ENSMUST00000159629 372 ntBASIC6.18□□□□□ -1.42
Trim42Q9D2H5 0610040B10Rik-201ENSMUST00000160231 501 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Trim42Q9D2H5 Csnk2b-209ENSMUST00000174779 632 ntTSL 2 BASIC6.18□□□□□ -1.42
Trim42Q9D2H5 Obox4-ps23-201ENSMUST00000175738 1137 ntBASIC6.18□□□□□ -1.42
Trim42Q9D2H5 9230113P08Rik-202ENSMUST00000176153 414 ntAPPRIS P5 TSL 5 BASIC6.18□□□□□ -1.42
Trim42Q9D2H5 Gm23018-201ENSMUST00000177928 109 ntBASIC6.18□□□□□ -1.42
Trim42Q9D2H5 Obox4-ps22-201ENSMUST00000179602 1137 ntBASIC6.18□□□□□ -1.42
Trim42Q9D2H5 Gm26910-201ENSMUST00000180450 698 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Trim42Q9D2H5 4930532G15Rik-201ENSMUST00000180632 699 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Trim42Q9D2H5 Mir6541-201ENSMUST00000183649 110 ntBASIC6.18□□□□□ -1.42
Trim42Q9D2H5 Mir7005-201ENSMUST00000185089 69 ntBASIC6.18□□□□□ -1.42
Trim42Q9D2H5 Gm28257-201ENSMUST00000185244 463 ntBASIC6.18□□□□□ -1.42
Trim42Q9D2H5 Gm28299-201ENSMUST00000189908 339 ntBASIC6.18□□□□□ -1.42
Trim42Q9D2H5 Gm8009-201ENSMUST00000191672 436 ntBASIC6.18□□□□□ -1.42
Trim42Q9D2H5 Gm37838-201ENSMUST00000194464 312 ntBASIC6.18□□□□□ -1.42
Trim42Q9D2H5 Gm44342-201ENSMUST00000196874 129 ntBASIC6.18□□□□□ -1.42
Trim42Q9D2H5 Gm42437-201ENSMUST00000197263 923 ntBASIC6.18□□□□□ -1.42
Trim42Q9D2H5 Gm43678-201ENSMUST00000197774 328 ntTSL 3 BASIC6.18□□□□□ -1.42
Trim42Q9D2H5 Gm43109-201ENSMUST00000198269 753 ntTSL 3 BASIC6.18□□□□□ -1.42
Trim42Q9D2H5 Gm9057-201ENSMUST00000198791 296 ntBASIC6.18□□□□□ -1.42
Trim42Q9D2H5 Gm44383-201ENSMUST00000198940 129 ntBASIC6.18□□□□□ -1.42
Trim42Q9D2H5 Gm36864-201ENSMUST00000205530 684 ntAPPRIS ALT2 TSL 3 BASIC6.18□□□□□ -1.42
Trim42Q9D2H5 Gm45189-201ENSMUST00000208567 363 ntBASIC6.18□□□□□ -1.42
Trim42Q9D2H5 Olfr546-ps1-201ENSMUST00000210328 326 ntBASIC6.18□□□□□ -1.42
Trim42Q9D2H5 Gm40608-201ENSMUST00000213692 654 ntTSL 3 BASIC6.18□□□□□ -1.42
Trim42Q9D2H5 AC091764.3-201ENSMUST00000219646 300 ntTSL 5 BASIC6.18□□□□□ -1.42
Trim42Q9D2H5 AC122371.2-201ENSMUST00000220583 366 ntBASIC6.18□□□□□ -1.42
Trim42Q9D2H5 Gm35890-201ENSMUST00000221195 564 ntTSL 5 BASIC6.18□□□□□ -1.42
Trim42Q9D2H5 AC174776.1-201ENSMUST00000221509 405 ntBASIC6.18□□□□□ -1.42
Trim42Q9D2H5 AC154709.1-201ENSMUST00000222304 446 ntTSL 3 BASIC6.18□□□□□ -1.42
Trim42Q9D2H5 AC174776.2-201ENSMUST00000222561 405 ntBASIC6.18□□□□□ -1.42
Trim42Q9D2H5 Tas2r143-201ENSMUST00000057398 882 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Trim42Q9D2H5 Ly6c1-201ENSMUST00000065408 844 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
Trim42Q9D2H5 Gm25189-201ENSMUST00000083911 164 ntBASIC6.18□□□□□ -1.42
Trim42Q9D2H5 1700109H08Rik-201ENSMUST00000008451 773 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Trim42Q9D2H5 n-R5s27-201ENSMUST00000093699 119 ntBASIC6.18□□□□□ -1.42
Trim42Q9D2H5 Trhr-202ENSMUST00000110289 1745 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
Trim42Q9D2H5 Tdrd12-204ENSMUST00000193633 3651 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Trim42Q9D2H5 Gm6125-201ENSMUST00000217983 3472 ntBASIC6.18□□□□□ -1.42
Trim42Q9D2H5 AC142245.1-201ENSMUST00000226611 1505 ntBASIC6.18□□□□□ -1.42
Trim42Q9D2H5 Olfr1310-202ENSMUST00000213559 4897 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Trim42Q9D2H5 Olfr1380-202ENSMUST00000215360 2498 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Trim42Q9D2H5 Chd9-201ENSMUST00000048665 12008 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
Trim42Q9D2H5 Nostrin-201ENSMUST00000041865 1808 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Trim42Q9D2H5 2610203C20Rik-206ENSMUST00000181814 2996 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Trim42Q9D2H5 Gm44416-201ENSMUST00000204055 2066 ntBASIC6.18□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 85.3 ms