Protein–RNA interactions for Protein: Q9D1C8

Vps28, Vacuolar protein sorting-associated protein 28 homolog, mousemouse

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps28Q9D1C8 Gm35134-201ENSMUST00000194086 923 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Vps28Q9D1C8 Gm32846-201ENSMUST00000205665 842 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Vps28Q9D1C8 Olfr892-ps1-201ENSMUST00000211998 932 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
Vps28Q9D1C8 AC171204.1-201ENSMUST00000215867 975 ntTSL 5 BASIC5.04□□□□□ -1.6
Vps28Q9D1C8 AC160061.1-201ENSMUST00000217766 533 ntTSL 3 BASIC5.04□□□□□ -1.6
Vps28Q9D1C8 Rpl29-ps2-203ENSMUST00000222043 1036 ntTSL 5 BASIC5.04□□□□□ -1.6
Vps28Q9D1C8 AC125484.1-201ENSMUST00000223218 234 ntBASIC5.04□□□□□ -1.6
Vps28Q9D1C8 AC154724.1-201ENSMUST00000225782 821 ntBASIC5.04□□□□□ -1.6
Vps28Q9D1C8 AC134864.1-201ENSMUST00000226326 511 ntBASIC5.04□□□□□ -1.6
Vps28Q9D1C8 Olfr16-201ENSMUST00000038432 1050 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
Vps28Q9D1C8 Tas2r117-201ENSMUST00000068302 1158 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
Vps28Q9D1C8 Rpl21-ps14-201ENSMUST00000080279 483 ntBASIC5.04□□□□□ -1.6
Vps28Q9D1C8 Cd59b-201ENSMUST00000090429 796 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Vps28Q9D1C8 Mup15-201ENSMUST00000095049 925 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
Vps28Q9D1C8 Sema3a-201ENSMUST00000030714 5930 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Vps28Q9D1C8 Olfr516-202ENSMUST00000216092 1493 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Vps28Q9D1C8 Olfr1043-202ENSMUST00000213886 1675 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Vps28Q9D1C8 Mtm1-213ENSMUST00000171933 3488 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Vps28Q9D1C8 AC139218.1-201ENSMUST00000228215 4287 ntBASIC5.04□□□□□ -1.6
Vps28Q9D1C8 Gm38243-201ENSMUST00000194737 1567 ntBASIC5.04□□□□□ -1.6
Vps28Q9D1C8 Gm42736-201ENSMUST00000200723 1353 ntBASIC5.04□□□□□ -1.6
Vps28Q9D1C8 Olfr1323-202ENSMUST00000213463 3717 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Vps28Q9D1C8 Vmn1r71-204ENSMUST00000227702 5034 ntAPPRIS P2 BASIC5.03□□□□□ -1.6
Vps28Q9D1C8 Akr1e1-201ENSMUST00000091848 3463 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Vps28Q9D1C8 Slc5a3-201ENSMUST00000113975 10913 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Vps28Q9D1C8 Olfr965-203ENSMUST00000215164 1722 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Vps28Q9D1C8 AC153532.3-201ENSMUST00000218660 3848 ntBASIC5.03□□□□□ -1.6
Vps28Q9D1C8 Obscn-202ENSMUST00000047441 24175 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Vps28Q9D1C8 Gm37053-201ENSMUST00000192399 2087 ntBASIC5.03□□□□□ -1.6
Vps28Q9D1C8 Olfr808-202ENSMUST00000203236 4523 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
Vps28Q9D1C8 Olfr1279-203ENSMUST00000216697 3385 ntAPPRIS ALT1 TSL 5 BASIC5.03□□□□□ -1.6
Vps28Q9D1C8 Gm45033-201ENSMUST00000206710 3167 ntBASIC5.03□□□□□ -1.6
Vps28Q9D1C8 Gm43784-201ENSMUST00000202922 2436 ntBASIC5.03□□□□□ -1.6
Vps28Q9D1C8 Kcnt2-202ENSMUST00000120709 5790 ntTSL 5 BASIC5.03□□□□□ -1.6
Vps28Q9D1C8 Olfr270-201ENSMUST00000095084 2204 ntAPPRIS ALT1 TSL 5 BASIC5.03□□□□□ -1.6
Vps28Q9D1C8 Abcb5-201ENSMUST00000035515 3876 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Vps28Q9D1C8 Gm21244-202ENSMUST00000189201 3115 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Vps28Q9D1C8 Gm6634-201ENSMUST00000180497 1804 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Vps28Q9D1C8 Scgb2b3-201ENSMUST00000108090 339 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Vps28Q9D1C8 Olfr328-202ENSMUST00000108824 1199 ntAPPRIS P1 TSL 3 BASIC5.03□□□□□ -1.6
Vps28Q9D1C8 Ssxb9-201ENSMUST00000115584 879 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Vps28Q9D1C8 Gm13321-201ENSMUST00000117101 400 ntBASIC5.03□□□□□ -1.6
Vps28Q9D1C8 Gm13195-201ENSMUST00000117229 261 ntBASIC5.03□□□□□ -1.6
Vps28Q9D1C8 Rpl38-ps2-201ENSMUST00000117356 213 ntBASIC5.03□□□□□ -1.6
Vps28Q9D1C8 Gm12039-201ENSMUST00000118219 180 ntBASIC5.03□□□□□ -1.6
Vps28Q9D1C8 Gm8129-201ENSMUST00000118230 213 ntBASIC5.03□□□□□ -1.6
Vps28Q9D1C8 Gm15057-201ENSMUST00000121516 534 ntBASIC5.03□□□□□ -1.6
Vps28Q9D1C8 Gm15344-201ENSMUST00000152600 421 ntTSL 3 BASIC5.03□□□□□ -1.6
Vps28Q9D1C8 Gm25603-201ENSMUST00000158361 105 ntBASIC5.03□□□□□ -1.6
Vps28Q9D1C8 Gm3531-201ENSMUST00000162698 489 ntBASIC5.03□□□□□ -1.6
Vps28Q9D1C8 Gm4134-201ENSMUST00000173244 563 ntBASIC5.03□□□□□ -1.6
Vps28Q9D1C8 Gm5777-201ENSMUST00000177265 448 ntBASIC5.03□□□□□ -1.6
Vps28Q9D1C8 Gm15143-201ENSMUST00000178180 714 ntBASIC5.03□□□□□ -1.6
Vps28Q9D1C8 Gm20776-201ENSMUST00000189940 700 ntBASIC5.03□□□□□ -1.6
Vps28Q9D1C8 Gm28396-201ENSMUST00000190309 379 ntBASIC5.03□□□□□ -1.6
Vps28Q9D1C8 Gm37837-201ENSMUST00000191743 604 ntBASIC5.03□□□□□ -1.6
Vps28Q9D1C8 Gm37098-201ENSMUST00000192290 244 ntBASIC5.03□□□□□ -1.6
Vps28Q9D1C8 Gm37708-201ENSMUST00000192337 895 ntBASIC5.03□□□□□ -1.6
Vps28Q9D1C8 Gm38283-201ENSMUST00000193041 695 ntBASIC5.03□□□□□ -1.6
Vps28Q9D1C8 Gm10292-202ENSMUST00000193165 585 ntBASIC5.03□□□□□ -1.6
Vps28Q9D1C8 Gm42694-201ENSMUST00000196951 358 ntBASIC5.03□□□□□ -1.6
Vps28Q9D1C8 Gm44686-201ENSMUST00000206776 540 ntTSL 3 BASIC5.03□□□□□ -1.6
Vps28Q9D1C8 Gm44648-201ENSMUST00000208267 329 ntBASIC5.03□□□□□ -1.6
Vps28Q9D1C8 Gm8189-203ENSMUST00000211159 1225 ntBASIC5.03□□□□□ -1.6
Vps28Q9D1C8 Gm7333-201ENSMUST00000213449 1060 ntBASIC5.03□□□□□ -1.6
Vps28Q9D1C8 AC164567.4-201ENSMUST00000219708 483 ntBASIC5.03□□□□□ -1.6
Vps28Q9D1C8 AC192334.1-201ENSMUST00000221832 1268 ntTSL 5 BASIC5.03□□□□□ -1.6
Vps28Q9D1C8 3830408C21Rik-203ENSMUST00000224293 822 ntBASIC5.03□□□□□ -1.6
Vps28Q9D1C8 AC154424.1-201ENSMUST00000225883 799 ntBASIC5.03□□□□□ -1.6
Vps28Q9D1C8 CT009600.2-201ENSMUST00000226638 481 ntBASIC5.03□□□□□ -1.6
Vps28Q9D1C8 AC154270.1-201ENSMUST00000227226 426 ntBASIC5.03□□□□□ -1.6
Vps28Q9D1C8 BC023105-201ENSMUST00000073997 1227 ntBASIC5.03□□□□□ -1.6
Vps28Q9D1C8 Gm26176-201ENSMUST00000083795 105 ntBASIC5.03□□□□□ -1.6
Vps28Q9D1C8 Olfr262-201ENSMUST00000087818 939 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
Vps28Q9D1C8 Olfr661-201ENSMUST00000098168 964 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
Vps28Q9D1C8 Olfr995-201ENSMUST00000099924 1113 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
Vps28Q9D1C8 Lrp1b-208ENSMUST00000167270 10071 ntTSL 5 BASIC5.03□□□□□ -1.6
Vps28Q9D1C8 Scel-201ENSMUST00000095576 2424 ntAPPRIS P2 TSL 1 (best) BASIC5.03□□□□□ -1.6
Vps28Q9D1C8 Gm36931-201ENSMUST00000192997 4801 ntBASIC5.03□□□□□ -1.6
Vps28Q9D1C8 Cdk14-203ENSMUST00000115451 5145 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
Vps28Q9D1C8 Olfr362-202ENSMUST00000213817 4059 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Vps28Q9D1C8 5330434G04Rik-202ENSMUST00000136406 3545 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Vps28Q9D1C8 Gm44587-201ENSMUST00000207399 1685 ntBASIC5.02□□□□□ -1.61
Vps28Q9D1C8 Vmn1r184-204ENSMUST00000227534 4807 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
Vps28Q9D1C8 Gm37696-201ENSMUST00000194223 3349 ntBASIC5.02□□□□□ -1.61
Vps28Q9D1C8 Olfr1480-202ENSMUST00000207093 1819 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Vps28Q9D1C8 Kcnh8-201ENSMUST00000039366 4287 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Vps28Q9D1C8 Ago2-201ENSMUST00000044113 13705 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Vps28Q9D1C8 Gm45324-201ENSMUST00000211193 5638 ntBASIC5.02□□□□□ -1.61
Vps28Q9D1C8 Gm25096-201ENSMUST00000104043 129 ntBASIC5.02□□□□□ -1.61
Vps28Q9D1C8 Gm24160-201ENSMUST00000104594 126 ntBASIC5.02□□□□□ -1.61
Vps28Q9D1C8 Hspb11-202ENSMUST00000106749 607 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Vps28Q9D1C8 Mier1-203ENSMUST00000106855 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
Vps28Q9D1C8 Gm11196-201ENSMUST00000119052 395 ntBASIC5.02□□□□□ -1.61
Vps28Q9D1C8 Gm11708-201ENSMUST00000119530 832 ntBASIC5.02□□□□□ -1.61
Vps28Q9D1C8 Gm12752-201ENSMUST00000121657 811 ntBASIC5.02□□□□□ -1.61
Vps28Q9D1C8 Gm3025-201ENSMUST00000163454 489 ntBASIC5.02□□□□□ -1.61
Vps28Q9D1C8 Gm3077-201ENSMUST00000165903 627 ntBASIC5.02□□□□□ -1.61
Vps28Q9D1C8 Gm2878-201ENSMUST00000170173 486 ntBASIC5.02□□□□□ -1.61
Vps28Q9D1C8 Trav14n-1-201ENSMUST00000177578 340 ntAPPRIS ALT2 BASIC5.02□□□□□ -1.61
Retrieved 100 of 76,532 protein–RNA pairs in 77.9 ms