Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 Zfp143-202ENSMUST00000169638 2914 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Ddx56Q9D0R4 Trav15n-1-201ENSMUST00000103590 349 ntAPPRIS ALT2 BASIC5.64□□□□□ -1.51
Ddx56Q9D0R4 Gm21637-201ENSMUST00000105124 778 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Ddx56Q9D0R4 Gm12383-201ENSMUST00000120628 760 ntBASIC5.64□□□□□ -1.51
Ddx56Q9D0R4 Gm15152-201ENSMUST00000121540 394 ntBASIC5.64□□□□□ -1.51
Ddx56Q9D0R4 Gm3076-201ENSMUST00000161613 451 ntBASIC5.64□□□□□ -1.51
Ddx56Q9D0R4 AC122858.3-202ENSMUST00000161721 433 ntTSL 5 BASIC5.64□□□□□ -1.51
Ddx56Q9D0R4 Vmn1r-ps84-201ENSMUST00000172853 923 ntBASIC5.64□□□□□ -1.51
Ddx56Q9D0R4 Gm2914-201ENSMUST00000186120 328 ntBASIC5.64□□□□□ -1.51
Ddx56Q9D0R4 Rpl23a-ps8-201ENSMUST00000186144 463 ntBASIC5.64□□□□□ -1.51
Ddx56Q9D0R4 Trav15d-1-dv6d-1-202ENSMUST00000186370 349 ntAPPRIS ALT2 BASIC5.64□□□□□ -1.51
Ddx56Q9D0R4 1700104B16Rik-202ENSMUST00000187948 722 ntTSL 2 BASIC5.64□□□□□ -1.51
Ddx56Q9D0R4 2310020H05Rik-201ENSMUST00000189489 720 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Ddx56Q9D0R4 Gm37288-201ENSMUST00000193963 334 ntBASIC5.64□□□□□ -1.51
Ddx56Q9D0R4 Ccl12-201ENSMUST00000000194 537 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Ddx56Q9D0R4 Gm37291-201ENSMUST00000195637 533 ntTSL 5 BASIC5.64□□□□□ -1.51
Ddx56Q9D0R4 Gm37134-201ENSMUST00000195810 628 ntTSL 3 BASIC5.64□□□□□ -1.51
Ddx56Q9D0R4 Gm43142-201ENSMUST00000198670 361 ntBASIC5.64□□□□□ -1.51
Ddx56Q9D0R4 Gm43214-201ENSMUST00000199242 352 ntBASIC5.64□□□□□ -1.51
Ddx56Q9D0R4 Gm8039-201ENSMUST00000204758 712 ntBASIC5.64□□□□□ -1.51
Ddx56Q9D0R4 Gm45169-201ENSMUST00000205717 639 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Ddx56Q9D0R4 Lyrm1-209ENSMUST00000208424 888 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Ddx56Q9D0R4 Gm44516-201ENSMUST00000208794 833 ntTSL 5 BASIC5.64□□□□□ -1.51
Ddx56Q9D0R4 4930452L12Rik-201ENSMUST00000220158 785 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Ddx56Q9D0R4 Gm8672-201ENSMUST00000221200 332 ntBASIC5.64□□□□□ -1.51
Ddx56Q9D0R4 AC166358.3-201ENSMUST00000221456 181 ntBASIC5.64□□□□□ -1.51
Ddx56Q9D0R4 AC192616.2-201ENSMUST00000221482 3841 ntBASIC5.64□□□□□ -1.51
Ddx56Q9D0R4 AC154552.4-201ENSMUST00000222171 151 ntBASIC5.64□□□□□ -1.51
Ddx56Q9D0R4 AC125543.4-201ENSMUST00000223385 117 ntBASIC5.64□□□□□ -1.51
Ddx56Q9D0R4 AC164116.2-201ENSMUST00000225398 1038 ntBASIC5.64□□□□□ -1.51
Ddx56Q9D0R4 AC122858.3-201ENSMUST00000226341 740 ntBASIC5.64□□□□□ -1.51
Ddx56Q9D0R4 AC114572.1-201ENSMUST00000227262 300 ntBASIC5.64□□□□□ -1.51
Ddx56Q9D0R4 AC154616.2-201ENSMUST00000227978 398 ntBASIC5.64□□□□□ -1.51
Ddx56Q9D0R4 AC122858.1-202ENSMUST00000228290 986 ntBASIC5.64□□□□□ -1.51
Ddx56Q9D0R4 Fhl5-201ENSMUST00000029922 1106 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Ddx56Q9D0R4 Sprr2d-201ENSMUST00000047477 681 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Ddx56Q9D0R4 Olfr986-201ENSMUST00000062229 1016 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Ddx56Q9D0R4 Rnase9-201ENSMUST00000064214 1189 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Ddx56Q9D0R4 Olfr871-201ENSMUST00000073122 1147 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Ddx56Q9D0R4 Olfr715b-201ENSMUST00000081044 948 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Ddx56Q9D0R4 Cpne4-202ENSMUST00000077190 3409 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Ddx56Q9D0R4 Gm7205-201ENSMUST00000196032 1323 ntBASIC5.64□□□□□ -1.51
Ddx56Q9D0R4 AI987944-201ENSMUST00000071804 2671 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
Ddx56Q9D0R4 Olfr586-203ENSMUST00000213281 5001 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
Ddx56Q9D0R4 Dnah2-202ENSMUST00000108659 13704 ntAPPRIS P2 TSL 5 BASIC5.64□□□□□ -1.51
Ddx56Q9D0R4 Med13-201ENSMUST00000043624 10546 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
Ddx56Q9D0R4 Gm45183-201ENSMUST00000207937 1497 ntBASIC5.64□□□□□ -1.51
Ddx56Q9D0R4 Olfr1097-202ENSMUST00000217403 4430 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Ddx56Q9D0R4 Gm3278-201ENSMUST00000164459 1500 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Ddx56Q9D0R4 Gm44235-201ENSMUST00000204312 3058 ntBASIC5.63□□□□□ -1.51
Ddx56Q9D0R4 Gm19950-204ENSMUST00000208167 4196 ntTSL 5 BASIC5.63□□□□□ -1.51
Ddx56Q9D0R4 Ash1l-201ENSMUST00000090933 11268 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
Ddx56Q9D0R4 F630028O10Rik-201ENSMUST00000133125 2771 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Ddx56Q9D0R4 Nlrp5-202ENSMUST00000086341 3471 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
Ddx56Q9D0R4 Clvs1-202ENSMUST00000108348 3526 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Ddx56Q9D0R4 Olfr357-202ENSMUST00000213218 5367 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
Ddx56Q9D0R4 Abcg3-201ENSMUST00000031239 3035 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Ddx56Q9D0R4 Gm38590-202ENSMUST00000210654 1803 ntTSL 5 BASIC5.63□□□□□ -1.51
Ddx56Q9D0R4 Gm43317-201ENSMUST00000197924 2544 ntBASIC5.63□□□□□ -1.51
Ddx56Q9D0R4 Mir680-1-201ENSMUST00000102257 109 ntBASIC5.63□□□□□ -1.51
Ddx56Q9D0R4 Igkv4-92-201ENSMUST00000103332 351 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
Ddx56Q9D0R4 Olfr328-202ENSMUST00000108824 1199 ntAPPRIS P1 TSL 3 BASIC5.63□□□□□ -1.51
Ddx56Q9D0R4 Gm11032-201ENSMUST00000109941 102 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
Ddx56Q9D0R4 Mir467h-201ENSMUST00000116759 121 ntBASIC5.63□□□□□ -1.51
Ddx56Q9D0R4 Hspe1-ps4-201ENSMUST00000119538 286 ntBASIC5.63□□□□□ -1.51
Ddx56Q9D0R4 Gm13924-201ENSMUST00000119899 486 ntBASIC5.63□□□□□ -1.51
Ddx56Q9D0R4 Mup-ps19-201ENSMUST00000120390 519 ntBASIC5.63□□□□□ -1.51
Ddx56Q9D0R4 Gm14506-201ENSMUST00000121165 536 ntBASIC5.63□□□□□ -1.51
Ddx56Q9D0R4 Gm12472-201ENSMUST00000153232 1140 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Ddx56Q9D0R4 Gm24477-201ENSMUST00000157438 103 ntBASIC5.63□□□□□ -1.51
Ddx56Q9D0R4 Gm26172-201ENSMUST00000158421 134 ntBASIC5.63□□□□□ -1.51
Ddx56Q9D0R4 Gm16125-201ENSMUST00000159003 339 ntBASIC5.63□□□□□ -1.51
Ddx56Q9D0R4 Gm4134-201ENSMUST00000173244 563 ntBASIC5.63□□□□□ -1.51
Ddx56Q9D0R4 Trav12n-3-201ENSMUST00000179583 353 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
Ddx56Q9D0R4 Gm26933-201ENSMUST00000182320 827 ntBASIC5.63□□□□□ -1.51
Ddx56Q9D0R4 Mir8118-201ENSMUST00000183962 129 ntBASIC5.63□□□□□ -1.51
Ddx56Q9D0R4 Gm28986-201ENSMUST00000189682 678 ntTSL 5 BASIC5.63□□□□□ -1.51
Ddx56Q9D0R4 Gm28357-201ENSMUST00000190256 622 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Ddx56Q9D0R4 1700084F23Rik-205ENSMUST00000191362 743 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Ddx56Q9D0R4 Gm37059-201ENSMUST00000191723 678 ntTSL 5 BASIC5.63□□□□□ -1.51
Ddx56Q9D0R4 9330198I05Rik-201ENSMUST00000196846 1095 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Ddx56Q9D0R4 Gm9317-201ENSMUST00000197055 862 ntBASIC5.63□□□□□ -1.51
Ddx56Q9D0R4 Mir409-201ENSMUST00000198153 79 ntBASIC5.63□□□□□ -1.51
Ddx56Q9D0R4 Mir6906-201ENSMUST00000198998 58 ntBASIC5.63□□□□□ -1.51
Ddx56Q9D0R4 4930567K12Rik-201ENSMUST00000207593 1281 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Ddx56Q9D0R4 Gm33091-201ENSMUST00000217798 748 ntTSL 3 BASIC5.63□□□□□ -1.51
Ddx56Q9D0R4 Olfr628-202ENSMUST00000218266 951 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
Ddx56Q9D0R4 AC153548.2-201ENSMUST00000219770 885 ntBASIC5.63□□□□□ -1.51
Ddx56Q9D0R4 AC123705.4-203ENSMUST00000221566 380 ntTSL 3 BASIC5.63□□□□□ -1.51
Ddx56Q9D0R4 AC154436.2-201ENSMUST00000227408 208 ntBASIC5.63□□□□□ -1.51
Ddx56Q9D0R4 Olfr690-201ENSMUST00000061920 1062 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
Ddx56Q9D0R4 Olfr57-201ENSMUST00000082244 1080 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
Ddx56Q9D0R4 Olfr243-201ENSMUST00000098194 951 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
Ddx56Q9D0R4 Gm19514-201ENSMUST00000206856 4489 ntBASIC5.63□□□□□ -1.51
Ddx56Q9D0R4 Ankrd49-202ENSMUST00000214456 3207 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Ddx56Q9D0R4 Trim30b-205ENSMUST00000171830 2771 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Ddx56Q9D0R4 Olfr303-204ENSMUST00000215733 3914 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
Ddx56Q9D0R4 Pls3-202ENSMUST00000114057 3160 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Ddx56Q9D0R4 Cdh10-202ENSMUST00000166873 3176 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Ddx56Q9D0R4 Gm3665-201ENSMUST00000177214 2461 ntBASIC5.63□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 99.9 ms