Protein–RNA interactions for Protein: Q9CQ56

Use1, Vesicle transport protein USE1, mousemouse

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Use1Q9CQ56 Gm7195-201ENSMUST00000190869 1707 ntBASIC4.31□□□□□ -1.72
Use1Q9CQ56 Gpr21-201ENSMUST00000065441 3619 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Use1Q9CQ56 Gm38235-201ENSMUST00000194600 4952 ntBASIC4.31□□□□□ -1.72
Use1Q9CQ56 Tnfrsf26-202ENSMUST00000208124 3062 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Use1Q9CQ56 Olfr1535-202ENSMUST00000217519 3959 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Use1Q9CQ56 Gm14124-201ENSMUST00000109922 3018 ntAPPRIS P1 TSL 3 BASIC4.31□□□□□ -1.72
Use1Q9CQ56 Gm21704-201ENSMUST00000169382 1573 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Use1Q9CQ56 Rbmy-202ENSMUST00000171534 1573 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Use1Q9CQ56 Gm21708-202ENSMUST00000188091 1573 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Use1Q9CQ56 Gm10256-203ENSMUST00000189964 1573 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Use1Q9CQ56 Serpinb9e-201ENSMUST00000071873 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Use1Q9CQ56 Olfr843-202ENSMUST00000214019 7499 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Use1Q9CQ56 Gm4631-202ENSMUST00000121393 4402 ntAPPRIS P1 TSL 2 BASIC4.3□□□□□ -1.72
Use1Q9CQ56 Gm38104-201ENSMUST00000195121 1895 ntBASIC4.3□□□□□ -1.72
Use1Q9CQ56 Gm7988-201ENSMUST00000196623 2297 ntBASIC4.3□□□□□ -1.72
Use1Q9CQ56 Olfr360-202ENSMUST00000216706 1816 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
Use1Q9CQ56 Olfr111-202ENSMUST00000214259 2620 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
Use1Q9CQ56 Olfr613-202ENSMUST00000214173 3840 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
Use1Q9CQ56 Slfn8-201ENSMUST00000038141 4011 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Use1Q9CQ56 Olfr875-202ENSMUST00000215128 2039 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
Use1Q9CQ56 Igkv12-98-201ENSMUST00000103327 344 ntAPPRIS ALT2 BASIC4.3□□□□□ -1.72
Use1Q9CQ56 Gm24124-201ENSMUST00000104103 132 ntBASIC4.3□□□□□ -1.72
Use1Q9CQ56 Gm12887-201ENSMUST00000106265 360 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
Use1Q9CQ56 Klra4-201ENSMUST00000119096 1245 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Use1Q9CQ56 Gm17025-201ENSMUST00000133273 580 ntTSL 2 BASIC4.3□□□□□ -1.72
Use1Q9CQ56 Gm22226-201ENSMUST00000157355 109 ntBASIC4.3□□□□□ -1.72
Use1Q9CQ56 Gm25342-201ENSMUST00000157459 122 ntBASIC4.3□□□□□ -1.72
Use1Q9CQ56 Gm27864-201ENSMUST00000183704 190 ntBASIC4.3□□□□□ -1.72
Use1Q9CQ56 Mir7674-201ENSMUST00000184964 63 ntBASIC4.3□□□□□ -1.72
Use1Q9CQ56 1700027A15Rik-201ENSMUST00000185768 321 ntTSL 5 BASIC4.3□□□□□ -1.72
Use1Q9CQ56 1700015G11Rik-204ENSMUST00000190307 255 ntAPPRIS ALT2 TSL 3 BASIC4.3□□□□□ -1.72
Use1Q9CQ56 Gm20877-202ENSMUST00000191358 1222 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Use1Q9CQ56 Gm18752-202ENSMUST00000193627 587 ntTSL 3 BASIC4.3□□□□□ -1.72
Use1Q9CQ56 Gm38080-201ENSMUST00000194035 268 ntBASIC4.3□□□□□ -1.72
Use1Q9CQ56 1700063I16Rik-201ENSMUST00000194611 611 ntBASIC4.3□□□□□ -1.72
Use1Q9CQ56 Gm36971-201ENSMUST00000195244 378 ntTSL 5 BASIC4.3□□□□□ -1.72
Use1Q9CQ56 Gm8069-201ENSMUST00000197887 154 ntBASIC4.3□□□□□ -1.72
Use1Q9CQ56 Ube2l3-ps1-201ENSMUST00000199777 436 ntBASIC4.3□□□□□ -1.72
Use1Q9CQ56 Gm2762-205ENSMUST00000202366 356 ntTSL 3 BASIC4.3□□□□□ -1.72
Use1Q9CQ56 Gm18007-201ENSMUST00000205019 844 ntBASIC4.3□□□□□ -1.72
Use1Q9CQ56 Gm44521-201ENSMUST00000206469 217 ntBASIC4.3□□□□□ -1.72
Use1Q9CQ56 Gm19269-201ENSMUST00000211401 804 ntBASIC4.3□□□□□ -1.72
Use1Q9CQ56 AC117202.1-201ENSMUST00000227007 445 ntBASIC4.3□□□□□ -1.72
Use1Q9CQ56 Olfr788-201ENSMUST00000056961 936 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
Use1Q9CQ56 Olfr469-201ENSMUST00000075704 945 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
Use1Q9CQ56 Olfr1168-201ENSMUST00000079599 939 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
Use1Q9CQ56 Gm23677-201ENSMUST00000083156 104 ntBASIC4.3□□□□□ -1.72
Use1Q9CQ56 n-R5s13-201ENSMUST00000093707 119 ntBASIC4.3□□□□□ -1.72
Use1Q9CQ56 Gm10794-201ENSMUST00000099624 207 ntBASIC4.3□□□□□ -1.72
Use1Q9CQ56 Olfr1249-201ENSMUST00000099769 957 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
Use1Q9CQ56 Gm42537-201ENSMUST00000198260 2574 ntBASIC4.3□□□□□ -1.72
Use1Q9CQ56 Olfr944-203ENSMUST00000215306 1523 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
Use1Q9CQ56 Gm37900-201ENSMUST00000195510 3805 ntBASIC4.3□□□□□ -1.72
Use1Q9CQ56 Olfr91-202ENSMUST00000216376 3832 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
Use1Q9CQ56 Fam46d-204ENSMUST00000167154 3004 ntAPPRIS P1 TSL 3 BASIC4.29□□□□□ -1.72
Use1Q9CQ56 Nebl-206ENSMUST00000131957 1709 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
Use1Q9CQ56 Gm38152-201ENSMUST00000195389 3566 ntBASIC4.29□□□□□ -1.72
Use1Q9CQ56 Gm7269-201ENSMUST00000210819 1373 ntBASIC4.29□□□□□ -1.72
Use1Q9CQ56 Akap4-201ENSMUST00000057101 2851 ntAPPRIS P4 TSL 1 (best) BASIC4.29□□□□□ -1.72
Use1Q9CQ56 AC190403.1-201ENSMUST00000224515 1325 ntBASIC4.29□□□□□ -1.72
Use1Q9CQ56 AC113059.3-201ENSMUST00000217423 2777 ntBASIC4.29□□□□□ -1.72
Use1Q9CQ56 Zfp143-201ENSMUST00000084727 3003 ntAPPRIS ALT1 TSL 1 (best) BASIC4.29□□□□□ -1.72
Use1Q9CQ56 Gm38032-201ENSMUST00000195052 1589 ntBASIC4.29□□□□□ -1.72
Use1Q9CQ56 Gm8744-201ENSMUST00000204475 3581 ntBASIC4.29□□□□□ -1.72
Use1Q9CQ56 Trbv13-3-201ENSMUST00000103271 340 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
Use1Q9CQ56 Gm10964-201ENSMUST00000106852 120 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
Use1Q9CQ56 Rps19-ps7-201ENSMUST00000116122 438 ntBASIC4.29□□□□□ -1.72
Use1Q9CQ56 Gm14854-201ENSMUST00000117758 841 ntBASIC4.29□□□□□ -1.72
Use1Q9CQ56 Gm11448-201ENSMUST00000120427 450 ntBASIC4.29□□□□□ -1.72
Use1Q9CQ56 Gm25179-201ENSMUST00000122632 128 ntBASIC4.29□□□□□ -1.72
Use1Q9CQ56 Gm23441-201ENSMUST00000157268 127 ntBASIC4.29□□□□□ -1.72
Use1Q9CQ56 Gm22968-201ENSMUST00000157955 118 ntBASIC4.29□□□□□ -1.72
Use1Q9CQ56 Gm5258-201ENSMUST00000165437 327 ntBASIC4.29□□□□□ -1.72
Use1Q9CQ56 1700116B05Rik-201ENSMUST00000173461 414 ntTSL 2 BASIC4.29□□□□□ -1.72
Use1Q9CQ56 Jpx-201ENSMUST00000181020 3802 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
Use1Q9CQ56 Gm43712-201ENSMUST00000198020 291 ntBASIC4.29□□□□□ -1.72
Use1Q9CQ56 D030025E07Rik-204ENSMUST00000198275 653 ntTSL 3 BASIC4.29□□□□□ -1.72
Use1Q9CQ56 Gm35216-201ENSMUST00000203777 433 ntTSL 2 BASIC4.29□□□□□ -1.72
Use1Q9CQ56 Fxyd1-210ENSMUST00000206012 501 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
Use1Q9CQ56 Gm45261-201ENSMUST00000211023 594 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
Use1Q9CQ56 Gm45686-202ENSMUST00000211580 1138 ntTSL 5 BASIC4.29□□□□□ -1.72
Use1Q9CQ56 Gm6056-201ENSMUST00000221253 488 ntBASIC4.29□□□□□ -1.72
Use1Q9CQ56 AC123705.4-202ENSMUST00000221602 697 ntTSL 2 BASIC4.29□□□□□ -1.72
Use1Q9CQ56 Gm40884-201ENSMUST00000223505 541 ntTSL 3 BASIC4.29□□□□□ -1.72
Use1Q9CQ56 AC129308.2-201ENSMUST00000224588 789 ntBASIC4.29□□□□□ -1.72
Use1Q9CQ56 AC154562.1-201ENSMUST00000226140 966 ntBASIC4.29□□□□□ -1.72
Use1Q9CQ56 Mir188-201ENSMUST00000083464 68 ntBASIC4.29□□□□□ -1.72
Use1Q9CQ56 Gm26163-201ENSMUST00000083792 178 ntBASIC4.29□□□□□ -1.72
Use1Q9CQ56 n-R5s168-201ENSMUST00000083948 104 ntBASIC4.29□□□□□ -1.72
Use1Q9CQ56 Polk-202ENSMUST00000091387 2382 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
Use1Q9CQ56 1700017N19Rik-206ENSMUST00000190386 1483 ntTSL 5 BASIC4.29□□□□□ -1.72
Use1Q9CQ56 B130011K05Rik-201ENSMUST00000151765 3270 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
Use1Q9CQ56 Olfr1188-202ENSMUST00000217131 1406 ntAPPRIS ALT2 TSL 3 BASIC4.29□□□□□ -1.72
Use1Q9CQ56 Cybb-201ENSMUST00000015484 4752 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
Use1Q9CQ56 Nxf2-203ENSMUST00000113189 2375 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
Use1Q9CQ56 Olfr726-206ENSMUST00000217025 1363 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
Use1Q9CQ56 Ccser2-201ENSMUST00000067700 7334 ntTSL 5 BASIC4.28□□□□□ -1.72
Use1Q9CQ56 Gm5615-201ENSMUST00000098900 2348 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Use1Q9CQ56 Trappc13-205ENSMUST00000144060 3538 ntAPPRIS ALT1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Use1Q9CQ56 Jmjd1c-206ENSMUST00000173689 8609 ntAPPRIS ALT2 TSL 2 BASIC4.28□□□□□ -1.72
Retrieved 100 of 76,532 protein–RNA pairs in 77.4 ms