Protein–RNA interactions for Protein: Q8CFK2

Brf1, Transcription factor IIIB 90 kDa subunit, mousemouse

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1Q8CFK2 Gm10352-201ENSMUST00000166474 1482 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
Brf1Q8CFK2 A530064N14Rik-201ENSMUST00000195338 1492 ntBASIC5.99□□□□□ -1.45
Brf1Q8CFK2 Zfp951-201ENSMUST00000089906 1356 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
Brf1Q8CFK2 Olfr828-201ENSMUST00000104914 939 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
Brf1Q8CFK2 Gm10936-201ENSMUST00000105264 252 ntBASIC5.99□□□□□ -1.45
Brf1Q8CFK2 Gm12245-201ENSMUST00000117266 357 ntBASIC5.99□□□□□ -1.45
Brf1Q8CFK2 9030622O22Rik-201ENSMUST00000129082 1245 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Brf1Q8CFK2 2210408F21Rik-203ENSMUST00000133510 429 ntTSL 3 BASIC5.99□□□□□ -1.45
Brf1Q8CFK2 Hnf1aos2-201ENSMUST00000138108 442 ntTSL 3 BASIC5.99□□□□□ -1.45
Brf1Q8CFK2 Crem-219ENSMUST00000140332 1015 ntTSL 5 BASIC5.99□□□□□ -1.45
Brf1Q8CFK2 A630023P12Rik-204ENSMUST00000142879 524 ntTSL 3 BASIC5.99□□□□□ -1.45
Brf1Q8CFK2 Mir6971-201ENSMUST00000183497 63 ntBASIC5.99□□□□□ -1.45
Brf1Q8CFK2 Gm27636-201ENSMUST00000184528 122 ntBASIC5.99□□□□□ -1.45
Brf1Q8CFK2 Gm37710-201ENSMUST00000193501 1274 ntBASIC5.99□□□□□ -1.45
Brf1Q8CFK2 Gm18150-201ENSMUST00000195341 645 ntBASIC5.99□□□□□ -1.45
Brf1Q8CFK2 4930447N08Rik-201ENSMUST00000196290 497 ntTSL 3 BASIC5.99□□□□□ -1.45
Brf1Q8CFK2 Gm43245-201ENSMUST00000197603 468 ntBASIC5.99□□□□□ -1.45
Brf1Q8CFK2 Mir6994-201ENSMUST00000198985 73 ntBASIC5.99□□□□□ -1.45
Brf1Q8CFK2 Gm44181-201ENSMUST00000203106 483 ntBASIC5.99□□□□□ -1.45
Brf1Q8CFK2 Gm7825-201ENSMUST00000204046 416 ntBASIC5.99□□□□□ -1.45
Brf1Q8CFK2 Gm32507-201ENSMUST00000209552 437 ntTSL 5 BASIC5.99□□□□□ -1.45
Brf1Q8CFK2 Cwc15-202ENSMUST00000213913 831 ntAPPRIS P1 TSL 3 BASIC5.99□□□□□ -1.45
Brf1Q8CFK2 AC121264.1-201ENSMUST00000214412 269 ntTSL 5 BASIC5.99□□□□□ -1.45
Brf1Q8CFK2 AC156504.1-201ENSMUST00000214608 157 ntBASIC5.99□□□□□ -1.45
Brf1Q8CFK2 AC153361.2-202ENSMUST00000220405 842 ntTSL 5 BASIC5.99□□□□□ -1.45
Brf1Q8CFK2 Gm7045-201ENSMUST00000221466 605 ntBASIC5.99□□□□□ -1.45
Brf1Q8CFK2 Gnrhr-201ENSMUST00000031172 1211 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Brf1Q8CFK2 Crem-202ENSMUST00000049942 953 ntTSL 2 BASIC5.99□□□□□ -1.45
Brf1Q8CFK2 Olfr1206-201ENSMUST00000077302 924 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
Brf1Q8CFK2 Snord59a-201ENSMUST00000082844 74 ntBASIC5.99□□□□□ -1.45
Brf1Q8CFK2 Olfr725-201ENSMUST00000089844 1110 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
Brf1Q8CFK2 n-R5s27-201ENSMUST00000093699 119 ntBASIC5.99□□□□□ -1.45
Brf1Q8CFK2 Gm37607-201ENSMUST00000194925 2623 ntBASIC5.99□□□□□ -1.45
Brf1Q8CFK2 Arrdc3-205ENSMUST00000161441 1908 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Brf1Q8CFK2 Olfr1260-202ENSMUST00000111512 4226 ntAPPRIS P1 TSL 2 BASIC5.99□□□□□ -1.45
Brf1Q8CFK2 Cd53-201ENSMUST00000038845 1742 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Brf1Q8CFK2 Gm13582-201ENSMUST00000146034 2655 ntTSL 2 BASIC5.99□□□□□ -1.45
Brf1Q8CFK2 Olfr387-ps1-201ENSMUST00000134773 1513 ntAPPRIS P1 TSL 3 BASIC5.99□□□□□ -1.45
Brf1Q8CFK2 Gm12667-201ENSMUST00000118299 1332 ntBASIC5.99□□□□□ -1.45
Brf1Q8CFK2 Dcun1d1-212ENSMUST00000198389 3020 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Brf1Q8CFK2 Dach2-202ENSMUST00000113378 2089 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Brf1Q8CFK2 Gm43266-201ENSMUST00000201049 1771 ntBASIC5.98□□□□□ -1.45
Brf1Q8CFK2 Zfp975-201ENSMUST00000107992 3148 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Brf1Q8CFK2 Gm5460-201ENSMUST00000100719 1903 ntAPPRIS P2 TSL 1 (best) BASIC5.98□□□□□ -1.45
Brf1Q8CFK2 Vmn1r-ps1-201ENSMUST00000118738 573 ntBASIC5.98□□□□□ -1.45
Brf1Q8CFK2 Gm12444-201ENSMUST00000121512 877 ntBASIC5.98□□□□□ -1.45
Brf1Q8CFK2 Gm25293-201ENSMUST00000122792 285 ntBASIC5.98□□□□□ -1.45
Brf1Q8CFK2 Gm13194-201ENSMUST00000142299 311 ntBASIC5.98□□□□□ -1.45
Brf1Q8CFK2 Olfr367-ps-202ENSMUST00000143957 942 ntBASIC5.98□□□□□ -1.45
Brf1Q8CFK2 Gm12602-202ENSMUST00000154352 707 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Brf1Q8CFK2 Gm16236-201ENSMUST00000159588 379 ntBASIC5.98□□□□□ -1.45
Brf1Q8CFK2 Sult3a2-201ENSMUST00000165904 882 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
Brf1Q8CFK2 Vmn1r175-201ENSMUST00000166141 915 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
Brf1Q8CFK2 Vmn1r23-201ENSMUST00000175817 997 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
Brf1Q8CFK2 Gm21894-201ENSMUST00000179631 546 ntBASIC5.98□□□□□ -1.45
Brf1Q8CFK2 Gm26713-201ENSMUST00000181827 627 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Brf1Q8CFK2 Gm8614-201ENSMUST00000182528 978 ntBASIC5.98□□□□□ -1.45
Brf1Q8CFK2 Gm27492-201ENSMUST00000185194 187 ntBASIC5.98□□□□□ -1.45
Brf1Q8CFK2 Gm28097-201ENSMUST00000187333 366 ntBASIC5.98□□□□□ -1.45
Brf1Q8CFK2 Gm20896-202ENSMUST00000188585 921 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Brf1Q8CFK2 Gm38163-201ENSMUST00000194112 482 ntTSL 5 BASIC5.98□□□□□ -1.45
Brf1Q8CFK2 Gm38039-201ENSMUST00000195328 443 ntTSL 5 BASIC5.98□□□□□ -1.45
Brf1Q8CFK2 Gm9057-201ENSMUST00000198791 296 ntBASIC5.98□□□□□ -1.45
Brf1Q8CFK2 Gm18861-201ENSMUST00000202509 1186 ntBASIC5.98□□□□□ -1.45
Brf1Q8CFK2 Tas2r142-ps5-201ENSMUST00000204651 929 ntBASIC5.98□□□□□ -1.45
Brf1Q8CFK2 Gm44991-201ENSMUST00000208669 479 ntTSL 3 BASIC5.98□□□□□ -1.45
Brf1Q8CFK2 Olfr850-202ENSMUST00000211832 947 ntAPPRIS ALT2 BASIC5.98□□□□□ -1.45
Brf1Q8CFK2 Gm7822-201ENSMUST00000222433 581 ntBASIC5.98□□□□□ -1.45
Brf1Q8CFK2 Sult3a2-202ENSMUST00000223295 930 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
Brf1Q8CFK2 CT956049.1-201ENSMUST00000225671 763 ntBASIC5.98□□□□□ -1.45
Brf1Q8CFK2 Olfr1497-201ENSMUST00000061993 945 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
Brf1Q8CFK2 Gm7204-201ENSMUST00000062591 600 ntBASIC5.98□□□□□ -1.45
Brf1Q8CFK2 Olfr190-201ENSMUST00000071243 924 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
Brf1Q8CFK2 Gm24144-201ENSMUST00000082632 111 ntBASIC5.98□□□□□ -1.45
Brf1Q8CFK2 Gm25131-201ENSMUST00000082653 151 ntBASIC5.98□□□□□ -1.45
Brf1Q8CFK2 Olfr1137-201ENSMUST00000099850 933 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
Brf1Q8CFK2 Olfr1290-204ENSMUST00000217611 2729 ntAPPRIS P1 TSL 3 BASIC5.98□□□□□ -1.45
Brf1Q8CFK2 Gm37356-201ENSMUST00000193362 1613 ntBASIC5.98□□□□□ -1.45
Brf1Q8CFK2 Olfr1300-ps1-201ENSMUST00000208175 2235 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Brf1Q8CFK2 Gm26764-201ENSMUST00000181175 2596 ntTSL 5 BASIC5.98□□□□□ -1.45
Brf1Q8CFK2 Ceacam2-201ENSMUST00000044547 2844 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
Brf1Q8CFK2 Prrg1-210ENSMUST00000177904 3851 ntAPPRIS P1 TSL 2 BASIC5.98□□□□□ -1.45
Brf1Q8CFK2 Tmem45a-201ENSMUST00000023435 2701 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Brf1Q8CFK2 St18-213ENSMUST00000163727 5604 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
Brf1Q8CFK2 Xrn1-209ENSMUST00000190665 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
Brf1Q8CFK2 Gm42658-201ENSMUST00000197199 1575 ntBASIC5.97□□□□□ -1.45
Brf1Q8CFK2 Olfr969-202ENSMUST00000213266 1597 ntAPPRIS P1 TSL 2 BASIC5.97□□□□□ -1.45
Brf1Q8CFK2 Gm43428-201ENSMUST00000200108 3845 ntBASIC5.97□□□□□ -1.45
Brf1Q8CFK2 Wdr64-201ENSMUST00000094288 3817 ntAPPRIS P2 TSL 5 BASIC5.97□□□□□ -1.45
Brf1Q8CFK2 Olfr1131-203ENSMUST00000216756 1459 ntTSL 3 BASIC5.97□□□□□ -1.45
Brf1Q8CFK2 Emcn-201ENSMUST00000119475 1357 ntAPPRIS P3 TSL 1 (best) BASIC5.97□□□□□ -1.45
Brf1Q8CFK2 Tc2n-202ENSMUST00000160715 1386 ntTSL 5 BASIC5.97□□□□□ -1.45
Brf1Q8CFK2 Ankrd12-201ENSMUST00000038116 8991 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
Brf1Q8CFK2 Gm43281-201ENSMUST00000202522 2704 ntBASIC5.97□□□□□ -1.45
Brf1Q8CFK2 Gm3020-201ENSMUST00000112801 450 ntTSL 5 BASIC5.97□□□□□ -1.45
Brf1Q8CFK2 Gm14991-201ENSMUST00000119913 598 ntBASIC5.97□□□□□ -1.45
Brf1Q8CFK2 Gm14939-201ENSMUST00000120347 680 ntBASIC5.97□□□□□ -1.45
Brf1Q8CFK2 Gm12808-201ENSMUST00000120597 404 ntBASIC5.97□□□□□ -1.45
Brf1Q8CFK2 Gm8080-201ENSMUST00000122046 1155 ntBASIC5.97□□□□□ -1.45
Brf1Q8CFK2 Gm22343-201ENSMUST00000122648 286 ntBASIC5.97□□□□□ -1.45
Retrieved 100 of 76,532 protein–RNA pairs in 95.5 ms