Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Gm24402-201ENSMUST00000157873 91 ntBASIC5.47□□□□□ -1.53
Nup88Q8CEC0 Gm20417-201ENSMUST00000174784 425 ntTSL 5 BASIC5.47□□□□□ -1.53
Nup88Q8CEC0 Gm20657-201ENSMUST00000177079 515 ntBASIC5.47□□□□□ -1.53
Nup88Q8CEC0 Gm16378-201ENSMUST00000179168 342 ntBASIC5.47□□□□□ -1.53
Nup88Q8CEC0 Gm28136-206ENSMUST00000189800 1104 ntTSL 5 BASIC5.47□□□□□ -1.53
Nup88Q8CEC0 Gm20830-202ENSMUST00000190426 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Nup88Q8CEC0 B230110G15Rik-201ENSMUST00000190868 772 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Nup88Q8CEC0 Gm37710-201ENSMUST00000193501 1274 ntBASIC5.47□□□□□ -1.53
Nup88Q8CEC0 Gm37209-201ENSMUST00000194109 1276 ntBASIC5.47□□□□□ -1.53
Nup88Q8CEC0 Gm43144-201ENSMUST00000198256 485 ntBASIC5.47□□□□□ -1.53
Nup88Q8CEC0 Gm8891-201ENSMUST00000198546 832 ntBASIC5.47□□□□□ -1.53
Nup88Q8CEC0 4930518J21Rik-201ENSMUST00000209557 573 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Nup88Q8CEC0 Gm8288-201ENSMUST00000223406 593 ntBASIC5.47□□□□□ -1.53
Nup88Q8CEC0 CT025689.2-201ENSMUST00000224979 429 ntBASIC5.47□□□□□ -1.53
Nup88Q8CEC0 Iapp-201ENSMUST00000041993 839 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Nup88Q8CEC0 Olfr273-201ENSMUST00000051520 1059 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
Nup88Q8CEC0 Olfr123-201ENSMUST00000054748 930 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
Nup88Q8CEC0 Olfr211-201ENSMUST00000065786 930 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
Nup88Q8CEC0 Senp7-202ENSMUST00000089360 4802 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
Nup88Q8CEC0 Gm43317-201ENSMUST00000197924 2544 ntBASIC5.47□□□□□ -1.53
Nup88Q8CEC0 Zfp715-202ENSMUST00000048015 4333 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Nup88Q8CEC0 4930431P03Rik-202ENSMUST00000166127 4237 ntTSL 2 BASIC5.47□□□□□ -1.53
Nup88Q8CEC0 Gm5590-202ENSMUST00000186976 2315 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Nup88Q8CEC0 Vmn1r35-202ENSMUST00000227346 1854 ntBASIC5.47□□□□□ -1.53
Nup88Q8CEC0 Gm33609-201ENSMUST00000198559 2694 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Nup88Q8CEC0 AC102431.1-201ENSMUST00000223773 1449 ntBASIC5.47□□□□□ -1.53
Nup88Q8CEC0 Gm12289-201ENSMUST00000130860 2235 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Nup88Q8CEC0 Il1rapl1-203ENSMUST00000113966 9133 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
Nup88Q8CEC0 Igsf10-201ENSMUST00000039419 10084 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
Nup88Q8CEC0 AI481877-201ENSMUST00000107547 4664 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
Nup88Q8CEC0 Gm2987-201ENSMUST00000187673 1693 ntBASIC5.47□□□□□ -1.53
Nup88Q8CEC0 Cdh12-201ENSMUST00000075132 5636 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
Nup88Q8CEC0 Macc1-201ENSMUST00000048880 3818 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.53
Nup88Q8CEC0 Clvs1-201ENSMUST00000038841 3604 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Nup88Q8CEC0 Zfp799-201ENSMUST00000179695 5833 ntTSL 3 BASIC5.46□□□□□ -1.54
Nup88Q8CEC0 Gm42528-201ENSMUST00000200697 3418 ntBASIC5.46□□□□□ -1.54
Nup88Q8CEC0 Cftr-204ENSMUST00000129452 2835 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
Nup88Q8CEC0 AC187103.2-201ENSMUST00000223605 1617 ntBASIC5.46□□□□□ -1.54
Nup88Q8CEC0 Gm5392-201ENSMUST00000122189 789 ntBASIC5.46□□□□□ -1.54
Nup88Q8CEC0 Gm26098-201ENSMUST00000157247 288 ntBASIC5.46□□□□□ -1.54
Nup88Q8CEC0 Vmn2r-ps72-201ENSMUST00000172586 907 ntBASIC5.46□□□□□ -1.54
Nup88Q8CEC0 Gm10074-201ENSMUST00000174543 249 ntBASIC5.46□□□□□ -1.54
Nup88Q8CEC0 Mir6344-201ENSMUST00000183462 104 ntBASIC5.46□□□□□ -1.54
Nup88Q8CEC0 1700054K19Rik-201ENSMUST00000186102 452 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
Nup88Q8CEC0 Gm6546-201ENSMUST00000192096 766 ntBASIC5.46□□□□□ -1.54
Nup88Q8CEC0 Gm8599-201ENSMUST00000193033 457 ntBASIC5.46□□□□□ -1.54
Nup88Q8CEC0 Olfr724-202ENSMUST00000213390 1152 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
Nup88Q8CEC0 Olfr556-202ENSMUST00000213485 3825 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
Nup88Q8CEC0 AC164424.1-201ENSMUST00000221690 170 ntBASIC5.46□□□□□ -1.54
Nup88Q8CEC0 CT030254.3-201ENSMUST00000225959 1231 ntBASIC5.46□□□□□ -1.54
Nup88Q8CEC0 Ear-ps9-202ENSMUST00000226796 245 ntBASIC5.46□□□□□ -1.54
Nup88Q8CEC0 Olfr803-201ENSMUST00000056736 927 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
Nup88Q8CEC0 Olfr693-201ENSMUST00000057817 952 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
Nup88Q8CEC0 AC147639.2-202ENSMUST00000224834 1545 ntBASIC5.46□□□□□ -1.54
Nup88Q8CEC0 Fsd1l-207ENSMUST00000180164 7340 ntAPPRIS ALT1 TSL 5 BASIC5.46□□□□□ -1.54
Nup88Q8CEC0 Olfr1501-203ENSMUST00000215350 4395 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
Nup88Q8CEC0 4932411K12Rik-201ENSMUST00000190493 3156 ntTSL 2 BASIC5.46□□□□□ -1.54
Nup88Q8CEC0 Gm43605-201ENSMUST00000199663 3426 ntBASIC5.46□□□□□ -1.54
Nup88Q8CEC0 Gm43426-201ENSMUST00000197287 2597 ntBASIC5.46□□□□□ -1.54
Nup88Q8CEC0 Slco6d1-201ENSMUST00000027575 2328 ntAPPRIS P4 TSL 1 (best) BASIC5.46□□□□□ -1.54
Nup88Q8CEC0 Rgsl1-201ENSMUST00000124558 3642 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
Nup88Q8CEC0 Cfap54-207ENSMUST00000168110 9903 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
Nup88Q8CEC0 Gm16332-201ENSMUST00000134229 2967 ntBASIC5.45□□□□□ -1.54
Nup88Q8CEC0 Cyp7a1-201ENSMUST00000029905 4172 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Nup88Q8CEC0 Olfr826-202ENSMUST00000203720 1535 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
Nup88Q8CEC0 A530046M15Rik-201ENSMUST00000221778 1538 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Nup88Q8CEC0 AC108802.1-201ENSMUST00000219501 3142 ntBASIC5.45□□□□□ -1.54
Nup88Q8CEC0 AC144772.3-201ENSMUST00000228829 3126 ntBASIC5.45□□□□□ -1.54
Nup88Q8CEC0 Gm16082-201ENSMUST00000115992 377 ntBASIC5.45□□□□□ -1.54
Nup88Q8CEC0 Gm12465-201ENSMUST00000118591 300 ntBASIC5.45□□□□□ -1.54
Nup88Q8CEC0 Gm15206-201ENSMUST00000119143 454 ntBASIC5.45□□□□□ -1.54
Nup88Q8CEC0 Gm13932-201ENSMUST00000120873 610 ntBASIC5.45□□□□□ -1.54
Nup88Q8CEC0 Gm7350-201ENSMUST00000120964 636 ntBASIC5.45□□□□□ -1.54
Nup88Q8CEC0 Gm23171-201ENSMUST00000157159 264 ntBASIC5.45□□□□□ -1.54
Nup88Q8CEC0 Gm26000-201ENSMUST00000157991 107 ntBASIC5.45□□□□□ -1.54
Nup88Q8CEC0 Gm25839-201ENSMUST00000158921 103 ntBASIC5.45□□□□□ -1.54
Nup88Q8CEC0 4930570N18Rik-201ENSMUST00000159273 332 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Nup88Q8CEC0 Mir3473c-201ENSMUST00000175262 81 ntBASIC5.45□□□□□ -1.54
Nup88Q8CEC0 Gm6075-201ENSMUST00000186816 486 ntBASIC5.45□□□□□ -1.54
Nup88Q8CEC0 Gm18752-202ENSMUST00000193627 587 ntTSL 3 BASIC5.45□□□□□ -1.54
Nup88Q8CEC0 Ccl12-201ENSMUST00000000194 537 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Nup88Q8CEC0 Gm36997-201ENSMUST00000195090 707 ntBASIC5.45□□□□□ -1.54
Nup88Q8CEC0 Obox4-ps5-201ENSMUST00000196368 397 ntBASIC5.45□□□□□ -1.54
Nup88Q8CEC0 Obox4-ps4-201ENSMUST00000196934 397 ntBASIC5.45□□□□□ -1.54
Nup88Q8CEC0 Obox4-ps10-201ENSMUST00000199376 504 ntBASIC5.45□□□□□ -1.54
Nup88Q8CEC0 Gm2762-205ENSMUST00000202366 356 ntTSL 3 BASIC5.45□□□□□ -1.54
Nup88Q8CEC0 Gm44879-201ENSMUST00000207007 503 ntBASIC5.45□□□□□ -1.54
Nup88Q8CEC0 AC154510.1-201ENSMUST00000223925 737 ntBASIC5.45□□□□□ -1.54
Nup88Q8CEC0 AC154184.2-201ENSMUST00000225335 349 ntBASIC5.45□□□□□ -1.54
Nup88Q8CEC0 Hypm-201ENSMUST00000044987 581 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
Nup88Q8CEC0 Olfr898-201ENSMUST00000076504 951 ntAPPRIS P2 BASIC5.45□□□□□ -1.54
Nup88Q8CEC0 Olfr884-201ENSMUST00000077732 930 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
Nup88Q8CEC0 Snora52-201ENSMUST00000082732 137 ntBASIC5.45□□□□□ -1.54
Nup88Q8CEC0 Olfr1216-201ENSMUST00000099800 936 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
Nup88Q8CEC0 6720489N17Rik-202ENSMUST00000201563 2640 ntAPPRIS P2 TSL 1 (best) BASIC5.45□□□□□ -1.54
Nup88Q8CEC0 Fat2-202ENSMUST00000108864 14423 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
Nup88Q8CEC0 Olfr1252-203ENSMUST00000216203 3243 ntAPPRIS P1 TSL 3 BASIC5.45□□□□□ -1.54
Nup88Q8CEC0 Gm11251-201ENSMUST00000119593 2800 ntBASIC5.45□□□□□ -1.54
Nup88Q8CEC0 Gnrhr-203ENSMUST00000113372 2265 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Nup88Q8CEC0 Gm2004-201ENSMUST00000109049 1749 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
Retrieved 100 of 76,532 protein–RNA pairs in 82 ms