Protein–RNA interactions for Protein: Q8CDD9

Lrif1, Ligand-dependent nuclear receptor-interacting factor 1, mousemouse

Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrif1Q8CDD9 4930539C22Rik-201ENSMUST00000198231 970 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Lrif1Q8CDD9 Gm43028-201ENSMUST00000202561 481 ntBASIC4.52□□□□□ -1.69
Lrif1Q8CDD9 Gm43580-201ENSMUST00000202892 284 ntBASIC4.52□□□□□ -1.69
Lrif1Q8CDD9 Gm3148-201ENSMUST00000203594 612 ntBASIC4.52□□□□□ -1.69
Lrif1Q8CDD9 Gm44604-201ENSMUST00000205475 496 ntBASIC4.52□□□□□ -1.69
Lrif1Q8CDD9 Gm17766-201ENSMUST00000209223 442 ntBASIC4.52□□□□□ -1.69
Lrif1Q8CDD9 AC153870.1-201ENSMUST00000219599 560 ntBASIC4.52□□□□□ -1.69
Lrif1Q8CDD9 9530050K03Rik-201ENSMUST00000221663 1299 ntBASIC4.52□□□□□ -1.69
Lrif1Q8CDD9 Gnrhr-201ENSMUST00000031172 1211 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
Lrif1Q8CDD9 Gm25140-201ENSMUST00000083254 140 ntBASIC4.52□□□□□ -1.69
Lrif1Q8CDD9 n-R5s13-201ENSMUST00000093707 119 ntBASIC4.52□□□□□ -1.69
Lrif1Q8CDD9 Gabrg2-203ENSMUST00000109290 2868 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Lrif1Q8CDD9 Sema3a-201ENSMUST00000030714 5930 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
Lrif1Q8CDD9 Zfp322a-201ENSMUST00000050101 4844 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
Lrif1Q8CDD9 Mdga2-211ENSMUST00000222623 1449 ntTSL 5 BASIC4.52□□□□□ -1.69
Lrif1Q8CDD9 Gm44567-201ENSMUST00000205645 2631 ntBASIC4.52□□□□□ -1.69
Lrif1Q8CDD9 Olfr916-203ENSMUST00000214093 3685 ntAPPRIS P1 TSL 3 BASIC4.52□□□□□ -1.69
Lrif1Q8CDD9 A930017M01Rik-205ENSMUST00000227721 4167 ntBASIC4.52□□□□□ -1.69
Lrif1Q8CDD9 Olfr615-202ENSMUST00000214345 3403 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
Lrif1Q8CDD9 Pramel6-201ENSMUST00000026956 1540 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Lrif1Q8CDD9 Gm17752-201ENSMUST00000185787 3726 ntBASIC4.51□□□□□ -1.69
Lrif1Q8CDD9 Gm43528-201ENSMUST00000199492 1674 ntBASIC4.51□□□□□ -1.69
Lrif1Q8CDD9 Vmn1r169-203ENSMUST00000227547 2322 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
Lrif1Q8CDD9 Slfn10-ps-201ENSMUST00000100716 3621 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
Lrif1Q8CDD9 Gm18189-201ENSMUST00000218153 1951 ntBASIC4.51□□□□□ -1.69
Lrif1Q8CDD9 Tug1-202ENSMUST00000144852 4720 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
Lrif1Q8CDD9 Klhl28-203ENSMUST00000222508 6459 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Lrif1Q8CDD9 Usp9x-201ENSMUST00000089302 11887 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Lrif1Q8CDD9 Gm35755-201ENSMUST00000222392 2077 ntBASIC4.51□□□□□ -1.69
Lrif1Q8CDD9 Mir680-3-201ENSMUST00000102298 87 ntBASIC4.51□□□□□ -1.69
Lrif1Q8CDD9 Igkv12-98-201ENSMUST00000103327 344 ntAPPRIS ALT2 BASIC4.51□□□□□ -1.69
Lrif1Q8CDD9 Ighv1-36-201ENSMUST00000103513 348 ntAPPRIS ALT2 BASIC4.51□□□□□ -1.69
Lrif1Q8CDD9 Gm14304-201ENSMUST00000117272 446 ntBASIC4.51□□□□□ -1.69
Lrif1Q8CDD9 Mup-ps18-201ENSMUST00000120145 531 ntBASIC4.51□□□□□ -1.69
Lrif1Q8CDD9 Myhas-202ENSMUST00000145021 950 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
Lrif1Q8CDD9 Gm22312-201ENSMUST00000158005 130 ntBASIC4.51□□□□□ -1.69
Lrif1Q8CDD9 Gm8374-201ENSMUST00000163826 672 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
Lrif1Q8CDD9 Has2os-203ENSMUST00000165880 638 ntTSL 2 BASIC4.51□□□□□ -1.69
Lrif1Q8CDD9 Gm17152-201ENSMUST00000172430 535 ntBASIC4.51□□□□□ -1.69
Lrif1Q8CDD9 Gm26954-201ENSMUST00000182106 622 ntTSL 3 BASIC4.51□□□□□ -1.69
Lrif1Q8CDD9 Cox6b2-208ENSMUST00000183971 401 ntTSL 5 BASIC4.51□□□□□ -1.69
Lrif1Q8CDD9 Gm28263-201ENSMUST00000185884 400 ntBASIC4.51□□□□□ -1.69
Lrif1Q8CDD9 Gm28763-201ENSMUST00000188870 166 ntTSL 5 BASIC4.51□□□□□ -1.69
Lrif1Q8CDD9 Gm9687-201ENSMUST00000189312 602 ntBASIC4.51□□□□□ -1.69
Lrif1Q8CDD9 Gm29579-201ENSMUST00000190820 166 ntTSL 5 BASIC4.51□□□□□ -1.69
Lrif1Q8CDD9 Gm33206-201ENSMUST00000193544 454 ntTSL 2 BASIC4.51□□□□□ -1.69
Lrif1Q8CDD9 Gm18382-201ENSMUST00000194394 582 ntBASIC4.51□□□□□ -1.69
Lrif1Q8CDD9 Gm37473-201ENSMUST00000195079 674 ntTSL 5 BASIC4.51□□□□□ -1.69
Lrif1Q8CDD9 Gm44761-201ENSMUST00000209080 440 ntTSL 2 BASIC4.51□□□□□ -1.69
Lrif1Q8CDD9 Gm2607-201ENSMUST00000212389 627 ntBASIC4.51□□□□□ -1.69
Lrif1Q8CDD9 Gm19936-201ENSMUST00000216414 838 ntBASIC4.51□□□□□ -1.69
Lrif1Q8CDD9 Gm46191-201ENSMUST00000218899 433 ntBASIC4.51□□□□□ -1.69
Lrif1Q8CDD9 AC139294.1-201ENSMUST00000226708 571 ntBASIC4.51□□□□□ -1.69
Lrif1Q8CDD9 Gm6195-201ENSMUST00000063059 357 ntBASIC4.51□□□□□ -1.69
Lrif1Q8CDD9 V1ra8-201ENSMUST00000078371 890 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
Lrif1Q8CDD9 Mir99a-201ENSMUST00000083596 65 ntBASIC4.51□□□□□ -1.69
Lrif1Q8CDD9 1700057G04Rik-201ENSMUST00000098477 1052 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Lrif1Q8CDD9 Defb26-201ENSMUST00000099205 561 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Lrif1Q8CDD9 1700017N19Rik-210ENSMUST00000218464 1597 ntTSL 5 BASIC4.51□□□□□ -1.69
Lrif1Q8CDD9 Nxf3-201ENSMUST00000080929 2978 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Lrif1Q8CDD9 Gm44860-201ENSMUST00000208473 2346 ntBASIC4.51□□□□□ -1.69
Lrif1Q8CDD9 Cftr-201ENSMUST00000045706 6303 ntAPPRIS P2 TSL 1 (best) BASIC4.51□□□□□ -1.69
Lrif1Q8CDD9 Vmn1r66-201ENSMUST00000060374 1524 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
Lrif1Q8CDD9 Fgf7-202ENSMUST00000110442 2287 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Lrif1Q8CDD9 Cdh10-201ENSMUST00000040562 3407 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
Lrif1Q8CDD9 Nxf2-203ENSMUST00000113189 2375 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
Lrif1Q8CDD9 Olfr516-202ENSMUST00000216092 1493 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
Lrif1Q8CDD9 Zfp667-202ENSMUST00000108562 3498 ntAPPRIS P1 TSL 2 BASIC4.5□□□□□ -1.69
Lrif1Q8CDD9 Mndal-204ENSMUST00000188804 2026 ntAPPRIS P2 TSL 1 (best) BASIC4.5□□□□□ -1.69
Lrif1Q8CDD9 C430019N01Rik-201ENSMUST00000199517 1567 ntBASIC4.5□□□□□ -1.69
Lrif1Q8CDD9 Mir193b-201ENSMUST00000103784 79 ntBASIC4.5□□□□□ -1.69
Lrif1Q8CDD9 Gm22020-201ENSMUST00000104358 136 ntBASIC4.5□□□□□ -1.69
Lrif1Q8CDD9 Gm12062-201ENSMUST00000117533 259 ntBASIC4.5□□□□□ -1.69
Lrif1Q8CDD9 Gm4910-201ENSMUST00000119605 366 ntBASIC4.5□□□□□ -1.69
Lrif1Q8CDD9 4930440I19Rik-201ENSMUST00000144728 992 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
Lrif1Q8CDD9 Gm8214-201ENSMUST00000172123 351 ntBASIC4.5□□□□□ -1.69
Lrif1Q8CDD9 Gm22857-201ENSMUST00000174969 134 ntBASIC4.5□□□□□ -1.69
Lrif1Q8CDD9 Gm9499-201ENSMUST00000180888 964 ntBASIC4.5□□□□□ -1.69
Lrif1Q8CDD9 Gm27457-201ENSMUST00000184771 156 ntBASIC4.5□□□□□ -1.69
Lrif1Q8CDD9 1700060O08Rik-201ENSMUST00000185390 281 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
Lrif1Q8CDD9 Gm3145-201ENSMUST00000188584 220 ntBASIC4.5□□□□□ -1.69
Lrif1Q8CDD9 Gm8891-201ENSMUST00000198546 832 ntBASIC4.5□□□□□ -1.69
Lrif1Q8CDD9 Gm4714-201ENSMUST00000203395 279 ntBASIC4.5□□□□□ -1.69
Lrif1Q8CDD9 Gm45690-201ENSMUST00000210775 246 ntBASIC4.5□□□□□ -1.69
Lrif1Q8CDD9 AC125399.1-201ENSMUST00000224236 595 ntBASIC4.5□□□□□ -1.69
Lrif1Q8CDD9 AC154371.1-201ENSMUST00000226600 412 ntBASIC4.5□□□□□ -1.69
Lrif1Q8CDD9 Olfr1026-201ENSMUST00000056718 965 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
Lrif1Q8CDD9 H2-M9-201ENSMUST00000087165 1125 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
Lrif1Q8CDD9 Xlr5c-201ENSMUST00000088450 540 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
Lrif1Q8CDD9 5730408A14Rik-201ENSMUST00000194955 1824 ntBASIC4.5□□□□□ -1.69
Lrif1Q8CDD9 Olfr588-ps1-201ENSMUST00000118682 4607 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
Lrif1Q8CDD9 Gm37393-201ENSMUST00000195118 3870 ntBASIC4.5□□□□□ -1.69
Lrif1Q8CDD9 Gm37412-201ENSMUST00000194866 4321 ntBASIC4.5□□□□□ -1.69
Lrif1Q8CDD9 Gm15170-201ENSMUST00000121593 2023 ntBASIC4.5□□□□□ -1.69
Lrif1Q8CDD9 5930435M05Rik-201ENSMUST00000207572 3712 ntBASIC4.49□□□□□ -1.69
Lrif1Q8CDD9 A530099J19Rik-201ENSMUST00000151029 2764 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
Lrif1Q8CDD9 Ccr9-205ENSMUST00000180093 4239 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
Lrif1Q8CDD9 Cast-208ENSMUST00000223033 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
Lrif1Q8CDD9 Gm42946-201ENSMUST00000196108 2570 ntBASIC4.49□□□□□ -1.69
Lrif1Q8CDD9 Vmn1r32-201ENSMUST00000079584 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
Retrieved 100 of 76,532 protein–RNA pairs in 59.1 ms