Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Gm25264-201ENSMUST00000158519 117 ntBASIC4.46□□□□□ -1.7
Trub1Q8C0D0 Vmn1r-ps141-201ENSMUST00000176293 753 ntBASIC4.46□□□□□ -1.7
Trub1Q8C0D0 Gm28709-201ENSMUST00000186967 456 ntTSL 5 BASIC4.46□□□□□ -1.7
Trub1Q8C0D0 Gm28612-201ENSMUST00000189214 416 ntTSL 5 BASIC4.46□□□□□ -1.7
Trub1Q8C0D0 Gm42720-201ENSMUST00000196813 300 ntBASIC4.46□□□□□ -1.7
Trub1Q8C0D0 Gm43735-201ENSMUST00000198245 809 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
Trub1Q8C0D0 Gm44765-201ENSMUST00000206927 601 ntBASIC4.46□□□□□ -1.7
Trub1Q8C0D0 Gm45458-201ENSMUST00000209900 522 ntBASIC4.46□□□□□ -1.7
Trub1Q8C0D0 Gm40608-201ENSMUST00000213692 654 ntTSL 3 BASIC4.46□□□□□ -1.7
Trub1Q8C0D0 Gm18891-201ENSMUST00000216734 1087 ntBASIC4.46□□□□□ -1.7
Trub1Q8C0D0 AC153526.4-201ENSMUST00000217713 379 ntBASIC4.46□□□□□ -1.7
Trub1Q8C0D0 Selenok-ps6-201ENSMUST00000221812 283 ntBASIC4.46□□□□□ -1.7
Trub1Q8C0D0 AC131747.1-201ENSMUST00000226159 793 ntBASIC4.46□□□□□ -1.7
Trub1Q8C0D0 AC154371.1-201ENSMUST00000226600 412 ntBASIC4.46□□□□□ -1.7
Trub1Q8C0D0 AC139294.1-201ENSMUST00000226708 571 ntBASIC4.46□□□□□ -1.7
Trub1Q8C0D0 AC150560.2-201ENSMUST00000227208 171 ntBASIC4.46□□□□□ -1.7
Trub1Q8C0D0 Fam183b-201ENSMUST00000060581 493 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
Trub1Q8C0D0 Mecom-201ENSMUST00000061088 348 ntBASIC4.46□□□□□ -1.7
Trub1Q8C0D0 Olfr958-201ENSMUST00000062545 942 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
Trub1Q8C0D0 Gm37461-201ENSMUST00000193929 3704 ntBASIC4.46□□□□□ -1.7
Trub1Q8C0D0 Gm44567-201ENSMUST00000205645 2631 ntBASIC4.46□□□□□ -1.7
Trub1Q8C0D0 Gm5746-201ENSMUST00000183550 2200 ntBASIC4.46□□□□□ -1.7
Trub1Q8C0D0 9330159F19Rik-202ENSMUST00000213489 2992 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
Trub1Q8C0D0 Steap2-204ENSMUST00000115426 10408 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
Trub1Q8C0D0 Homer1-205ENSMUST00000109492 1533 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
Trub1Q8C0D0 Olfr588-ps1-201ENSMUST00000118682 4607 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
Trub1Q8C0D0 Cnot4-206ENSMUST00000202143 3202 ntAPPRIS ALT1 TSL 1 (best) BASIC4.45□□□□□ -1.7
Trub1Q8C0D0 Vmn2r86-201ENSMUST00000170257 3039 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
Trub1Q8C0D0 Olfr705-202ENSMUST00000213721 3001 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
Trub1Q8C0D0 Ankrd31-201ENSMUST00000207464 5146 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
Trub1Q8C0D0 Znrd1-201ENSMUST00000113669 742 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
Trub1Q8C0D0 Gm15560-201ENSMUST00000117107 643 ntBASIC4.45□□□□□ -1.7
Trub1Q8C0D0 Gm13733-201ENSMUST00000117290 535 ntBASIC4.45□□□□□ -1.7
Trub1Q8C0D0 Gm14933-201ENSMUST00000118840 481 ntBASIC4.45□□□□□ -1.7
Trub1Q8C0D0 Gm23501-201ENSMUST00000157744 256 ntBASIC4.45□□□□□ -1.7
Trub1Q8C0D0 Gm26954-201ENSMUST00000182106 622 ntTSL 3 BASIC4.45□□□□□ -1.7
Trub1Q8C0D0 Gm8604-201ENSMUST00000183150 965 ntBASIC4.45□□□□□ -1.7
Trub1Q8C0D0 Mir6410-201ENSMUST00000184204 104 ntBASIC4.45□□□□□ -1.7
Trub1Q8C0D0 Gm27805-201ENSMUST00000184513 79 ntBASIC4.45□□□□□ -1.7
Trub1Q8C0D0 Gm28835-202ENSMUST00000189206 543 ntTSL 3 BASIC4.45□□□□□ -1.7
Trub1Q8C0D0 Gm18867-201ENSMUST00000198022 1179 ntBASIC4.45□□□□□ -1.7
Trub1Q8C0D0 Gm6366-201ENSMUST00000198766 826 ntBASIC4.45□□□□□ -1.7
Trub1Q8C0D0 Gm44259-201ENSMUST00000204996 298 ntBASIC4.45□□□□□ -1.7
Trub1Q8C0D0 Vmn2r-ps61-201ENSMUST00000207286 889 ntBASIC4.45□□□□□ -1.7
Trub1Q8C0D0 Olfr1476-ps1-201ENSMUST00000208572 367 ntBASIC4.45□□□□□ -1.7
Trub1Q8C0D0 Gm45498-201ENSMUST00000210346 283 ntBASIC4.45□□□□□ -1.7
Trub1Q8C0D0 Gm19134-201ENSMUST00000221203 487 ntBASIC4.45□□□□□ -1.7
Trub1Q8C0D0 AC102542.1-201ENSMUST00000225204 1138 ntBASIC4.45□□□□□ -1.7
Trub1Q8C0D0 n-R5s7-201ENSMUST00000083755 121 ntBASIC4.45□□□□□ -1.7
Trub1Q8C0D0 Olfr597-201ENSMUST00000098203 948 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
Trub1Q8C0D0 Fgf7-202ENSMUST00000110442 2287 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
Trub1Q8C0D0 Gm14014-201ENSMUST00000156718 2717 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Trub1Q8C0D0 Zfp300-201ENSMUST00000040667 4634 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
Trub1Q8C0D0 Ckap5-204ENSMUST00000111338 6665 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
Trub1Q8C0D0 Gprc6a-201ENSMUST00000020062 2856 ntAPPRIS P2 TSL 1 (best) BASIC4.45□□□□□ -1.7
Trub1Q8C0D0 Gm36529-201ENSMUST00000222495 1529 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Trub1Q8C0D0 Gm43668-201ENSMUST00000197014 5342 ntBASIC4.45□□□□□ -1.7
Trub1Q8C0D0 Cfap54-207ENSMUST00000168110 9903 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
Trub1Q8C0D0 C2cd6-201ENSMUST00000097080 2131 ntAPPRIS P1 TSL 2 BASIC4.45□□□□□ -1.7
Trub1Q8C0D0 AC134860.3-201ENSMUST00000223564 1300 ntBASIC4.45□□□□□ -1.7
Trub1Q8C0D0 Vmn1r32-201ENSMUST00000079584 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
Trub1Q8C0D0 Gm37311-201ENSMUST00000195541 2024 ntBASIC4.45□□□□□ -1.7
Trub1Q8C0D0 Mmp1a-201ENSMUST00000034492 2022 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
Trub1Q8C0D0 Vmn1r171-203ENSMUST00000226321 3067 ntAPPRIS ALT2 BASIC4.44□□□□□ -1.7
Trub1Q8C0D0 D130004A15Rik-201ENSMUST00000201492 1577 ntBASIC4.44□□□□□ -1.7
Trub1Q8C0D0 Zfp72-202ENSMUST00000223163 4153 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
Trub1Q8C0D0 Gm28445-201ENSMUST00000187686 1498 ntTSL 5 BASIC4.44□□□□□ -1.7
Trub1Q8C0D0 Olfr1131-203ENSMUST00000216756 1459 ntTSL 3 BASIC4.44□□□□□ -1.7
Trub1Q8C0D0 Atp1b4-201ENSMUST00000016471 4201 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Trub1Q8C0D0 Olfr112-204ENSMUST00000208832 3173 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Trub1Q8C0D0 Olfr270-201ENSMUST00000095084 2204 ntAPPRIS ALT1 TSL 5 BASIC4.44□□□□□ -1.7
Trub1Q8C0D0 4930444P10Rik-201ENSMUST00000115367 868 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
Trub1Q8C0D0 Gm11633-201ENSMUST00000118176 444 ntBASIC4.44□□□□□ -1.7
Trub1Q8C0D0 Gm13550-201ENSMUST00000118185 525 ntBASIC4.44□□□□□ -1.7
Trub1Q8C0D0 Gm14876-201ENSMUST00000120795 327 ntBASIC4.44□□□□□ -1.7
Trub1Q8C0D0 Gm16158-201ENSMUST00000123509 785 ntTSL 5 BASIC4.44□□□□□ -1.7
Trub1Q8C0D0 Gm21990-201ENSMUST00000124692 383 ntBASIC4.44□□□□□ -1.7
Trub1Q8C0D0 Gm10444-201ENSMUST00000126708 148 ntBASIC4.44□□□□□ -1.7
Trub1Q8C0D0 Gm16060-201ENSMUST00000153140 478 ntBASIC4.44□□□□□ -1.7
Trub1Q8C0D0 Gm23743-201ENSMUST00000157389 274 ntBASIC4.44□□□□□ -1.7
Trub1Q8C0D0 Gm25603-201ENSMUST00000158361 105 ntBASIC4.44□□□□□ -1.7
Trub1Q8C0D0 Vmn2r-ps59-201ENSMUST00000174596 135 ntBASIC4.44□□□□□ -1.7
Trub1Q8C0D0 Mir3062-201ENSMUST00000174986 105 ntBASIC4.44□□□□□ -1.7
Trub1Q8C0D0 Gm27036-201ENSMUST00000182465 980 ntBASIC4.44□□□□□ -1.7
Trub1Q8C0D0 Gm26993-201ENSMUST00000182766 789 ntBASIC4.44□□□□□ -1.7
Trub1Q8C0D0 Gm4842-201ENSMUST00000183237 835 ntBASIC4.44□□□□□ -1.7
Trub1Q8C0D0 Gm37167-201ENSMUST00000194946 396 ntBASIC4.44□□□□□ -1.7
Trub1Q8C0D0 Kap-202ENSMUST00000203168 464 ntAPPRIS ALT2 TSL 3 BASIC4.44□□□□□ -1.7
Trub1Q8C0D0 Gm18791-201ENSMUST00000204611 726 ntBASIC4.44□□□□□ -1.7
Trub1Q8C0D0 Gm45081-201ENSMUST00000206281 572 ntBASIC4.44□□□□□ -1.7
Trub1Q8C0D0 Gm45228-201ENSMUST00000206585 352 ntBASIC4.44□□□□□ -1.7
Trub1Q8C0D0 AC154335.1-201ENSMUST00000224744 395 ntBASIC4.44□□□□□ -1.7
Trub1Q8C0D0 Muc16-201ENSMUST00000034653 1035 ntTSL 2 BASIC4.44□□□□□ -1.7
Trub1Q8C0D0 Olfr622-201ENSMUST00000058744 1105 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
Trub1Q8C0D0 Olfr493-201ENSMUST00000080106 945 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
Trub1Q8C0D0 Smim4-203ENSMUST00000090205 426 ntTSL 2 BASIC4.44□□□□□ -1.7
Trub1Q8C0D0 Cd300ld2-201ENSMUST00000092463 381 ntTSL 5 BASIC4.44□□□□□ -1.7
Trub1Q8C0D0 A530046M15Rik-201ENSMUST00000221778 1538 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Trub1Q8C0D0 Olfr1123-203ENSMUST00000216208 5245 ntAPPRIS ALT2 TSL 2 BASIC4.44□□□□□ -1.7
Trub1Q8C0D0 Cd86-201ENSMUST00000089620 2539 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Retrieved 100 of 76,532 protein–RNA pairs in 105.9 ms